Labeo rohita (rohu): 127154934
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Entry
127154934 CDS
T09007
Symbol
nfascb
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04514
Cell adhesion molecule (CAM) interaction
lroh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127154934 (nfascb)
04517 IgSF CAM signaling
127154934 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127154934 (nfascb)
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
L1 family
127154934 (nfascb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
Ig_PDGFR_d4
Ig_4
FN3_DSCAM-DSCAML_C
A9CJY8-like_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
127154934
NCBI-ProteinID:
XP_050952770
LinkDB
All DBs
Position
23:complement(20104923..20119201)
Genome browser
AA seq
1179 aa
AA seq
DB search
MLYKAEMRALKCWRIPAILTILQQTWILAMEIPPDVRQPPMIYKESPQDYIVDPVDPIIM
ECEATGNPPPVFTWTRNGVYLNVARDPQVSMRWRSGTLEIFFWGRPDDYEGVYQCTATNE
FGSALSSFINLRVSKARTWLKEYLEPVSVVVGLPLILPCNPPVGPPKPDTYWLNSTMAPI
RQDRRVSKSENGDLYFSSIVAEDALTNYVCVARFPFTNTIQQKPPLILQVLTARMAAHTP
PKFLKPKGTASTTIAMLGEELILECFAAGVPTPSIKWTKDWEEMSMTGKKLENFNKTLRI
KNVSMDDGGDYICTASNRMGSLDHVITVRVKSVPFWVEKPESLVLSRDDGGSIVCRADGI
PRPQIQWLVNGEPISDAPKSPGRQVSGDTLTFRGVVPDSAAVFQCNASNQYGYIMANAFL
AVMDMKPRLLGPREELIKTTEGNNTLLNCPYFGSPKPDLRWSKGGLGTLEGGRHRILPNG
TLEIRNTKLQDQGSYVCVASNVIGRDEKEVQLEVKEPIKIVRAPHNTVVIRGSLARFDCK
IEFDSTLDVTVTWLKDKKFLILGRRMTKDEDSLSIADVYRRDEGVYTCRVKSELEDVTSS
AKLTVMDRPDPPTDLEISDPSERSVRLTWVPGLSNHSPIKEYLVQYTEDLLADYWLLPSG
WKNLSSYPGNLNSVILQLTPFVEYKFRVIAVNGIGPSKPSWASEYYQTGGAVPDAIPRNI
RGMGSGVFRNNMEISWEPLEYREWNGPKLGYMVWWRRRDSREEWKNYTTYWWCSHIIYDT
DTFTPYEIKVQAINFFGYGPESPIVIGYSGEDRPVAAPTDLSVSDIESTKLTVHWEPVAR
VDIMGEIKEYKVYYWRESSRLPWHTVSRRIKTKSFKANGPRLSGTLTGLVPYSNYRIYIV
VANNRYEGPPSNTIEFQTPEGVPSIPRSFRIMHRHYDTIYLDWEEPAEPNGVLTGYILKY
QTLNVTLGDRIQVEYIPPNITYFSLRRFDRYTRYKFSLAAQTEVGVGEAFTEESPHFTTE
EHTRDQVDIVTQGWFIGLMCAVALLVLIMLIVFFIKRSRGGKYPVRDKKDFALEPMDDRE
NGTFDYRSLERITRVSTMPYSRREEESRQGRSQGAIEHISRRTNSDDSLMEYGEGEEIEF
NEDGSFIGEYTGVSKRNIDRSPYQDSSEPTSPVAIYSFA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacaaagcagagatgagagctctgaagtgttggaggattcctgccatacttact
atcctacagcaaacatggattttagccatggaaattcctcctgatgtcaggcagcctcca
atgatctataaagagagtcctcaagactacatagtagatccagttgaccctattataatg
gagtgtgaagcaacagggaatccacctccagtgttcacatggacacgtaatggagtgtac
ctgaatgtagctcgggatcctcaggtcagcatgaggtggcgttctggcacattagagatt
ttcttctggggtcgtcctgatgactacgagggtgtctatcagtgcacagcgactaatgag
tttggctctgctctgtccagtttcatcaatctgcgtgtctccaaggcccgtacgtggttg
aaggagtatctggagccagtctcagtggtggttggacttcctctcatccttccctgcaat
cctcctgtaggtcctccaaaacctgacacttactggctaaacagcactatggcaccaatc
cgtcaggatcgtcgagtatcgaagtcagaaaatggagatctgtacttctccagtatcgta
gcagaagacgctcttacgaactatgtctgtgtcgcccggtttcccttcacgaacaccatc
cagcagaaaccgccactcattctgcaggtgctcacagctcgcatggcagcccatacgcca
cccaagtttctgaaacccaaaggaaccgccagcacaacaattgcgatgctgggggaagag
cttattttggagtgtttcgctgctggagttccgacgccctccatcaaatggactaaggat
tgggaggagatgtctatgacaggaaagaagttggagaactttaataagacacttagaata
aagaacgtctctatggatgatggaggagactacatctgcactgcttcaaacaggatgggc
agcctggaccacgtcatcactgtcagggtcaaatcggttccgttctgggtggagaagcct
gagagtctggttttgtctcgtgatgacggtggcagtatagtgtgtagagctgatggaatt
cctcgaccccagatacagtggctggttaatggagagccaatcagtgatgctcctaagagt
ccaggcagacaggtttcaggagacactttgacgttcaggggtgtggttccagacagcgct
gctgtgttccagtgcaacgcttcaaaccagtacggctatatcatggcaaatgctttcttg
gctgtaatggatatgaaacctcgcctgttaggtccaagagaagaactcattaaaacaaca
gaaggcaataatactcttttaaactgcccatattttggctctcctaaacctgacctgcgg
tggtcaaaaggaggactaggtacattagaagggggtcgtcataggattcttccaaatggt
acactggaaatcagaaacacaaagctacaagatcaaggaagctacgtgtgtgttgcaagc
aacgtcattggacgagatgagaaagaggtccaactagaggtcaaagagcccattaaaatt
gtccgtgccccacacaatactgtagttataagaggaagtctggctcgctttgattgtaag
attgaattcgactcgactctggatgtcacagtcacttggcttaaggacaagaagttcttg
atcttaggaaggaggatgacgaaggatgaagattctctcagcattgctgatgtgtacaga
agagatgaaggcgtctacacctgcagggttaaaagtgaactggaggatgtcacttcctca
gccaaacttactgtgatggatcgtccagacccacccactgacctagagatttcagaccca
tcagagaggagtgttagactcacctgggtaccaggactgagcaaccacagtcctattaaa
gagtacctggttcaatataccgaagatcttcttgcagactattggctgctgccgagcggc
tggaagaacctgtccagctacccggggaacctaaactctgtcattttacagctgacacca
tttgtagagtacaaattccgggtcatcgctgtaaacgggataggtcccagtaaacccagc
tgggcatccgaatactaccagactggaggagctgtgcctgatgccatcccaagaaacatc
cgaggaatgggaagtggagttttcagaaataacatggaaatcagctgggagccactggag
tacagagaatggaatgggccaaaactgggttacatggtttggtggagacgaagggattca
agggaggagtggaagaactacacaacgtactggtggtgtagccacatcatctatgacact
gacaccttcacaccctatgagattaaagttcaggccatcaacttctttggctatggccca
gaatcccctattgtgattggctactctggagaggaccgtcctgtcgccgctccaactgac
ctgagcgtgtcagacattgagagcacaaagctgacagtccattgggaaccagtggcacga
gtcgacatcatgggggaaataaaggagtacaaagtttattactggagagagagcagtcgc
ctaccctggcacactgtgagcaggaggattaagaccaagagttttaaagctaatggacct
cgtctgtctgggaccctgacgggtcttgtaccgtatagtaactacagaatctatattgta
gtggccaataaccgctacgagggtccgcccagcaacaccattgagtttcagacacctgaa
ggagtgccctcgattcccagatcattcagaatcatgcaccgacactatgacaccatttat
ctagactgggaggaacctgcagaacccaatggcgttttgaccggatatattctcaaatat
cagacattgaacgtcactctaggtgacagaatccaggttgaatacattcctccgaacatc
acctacttctcccttcggcgatttgaccgctacacccgatacaagttctcactagcagca
caaaccgaggttggagtcggggaggcttttactgaggaatcaccccattttacaactgag
gaacatacccgggatcaagtggacattgtgacgcagggttggttcattggcttaatgtgt
gcagtggctctccttgttcttatcatgctcatagtctttttcatcaagaggagccgagga
ggaaagtacccagtgcgagacaaaaaggactttgcactggagccaatggatgatagagag
aatggaacgttcgattacaggtctcttgagaggataacacgcgtgtccacaatgccctat
agcagacgggaggaagaaagtcgacagggacgcagtcaaggtgcgatcgagcacattagc
aggagaacaaacagtgacgacagcctcatggagtacggtgagggcgaagagatcgagttt
aacgaggatggctccttcatcggcgagtacacgggcgtcagtaagaggaacatcgacagg
agcccgtaccaggacagctctgagcccacgtctcctgtggccatctactcttttgcttag
DBGET
integrated database retrieval system
