Labeo rohita (rohu): 127154937
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Entry
127154937 CDS
T09007
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127154937 (tfip11)
Spliceosome [BR:
lroh03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127154937 (tfip11)
Other components
Complex C specific factors
127154937 (tfip11)
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
127154937
NCBI-ProteinID:
XP_050952778
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All DBs
Position
23:20141687..20150274
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AA seq
833 aa
AA seq
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MSMSHLYGRRGDEEEDGVEIEKFEVTEWDLANEFNPDRRRHRQTKEEATYGIWAEHDSDD
ERPSFGGKRSKDYSAPVNFVSAGLRKTAAEEKAEQEGSDDSNDDGDAPPPPPRAAAPKKL
QTGGSFKTSQRFAGGIRTGQDLGSWEKHTRGIGQKLLQKMGYVPGKGLGKNAQGIVNPIE
AKVRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEKEFQRELGQWRKEPGTAKKKPKYSY
KTVEELKAHGKLDNRSMSRPAGELAQVKVIDMTGREQKVYHSYSHMSQKHSVPEEAPLSV
TTREQKTSGFSLPELEHNLKLLIELTEQDILQSARRLQHEKDTVVTLTHESDALQVRLAE
EEQSLGRLEQVMNLVDRFEAGDREGSPALSLQECAKIFQQLQTEFYQEYKTLGLGDLAVS
VVHPLLKERLRSWDPLKDCSDGLEEVGQWRAILETSQSLHGGPDTSNMDPYHRLIWEVWV
PVMRICVSQWQPRNVGPMVDCVECWAPVLPLWILDHVLEQLIFPRLQREVDSWNPLTDTV
PIHSWIHPWLPLMQTRLEPLYAPIRSKLAHALQRWHPSDSSARLILQPWKDVFTPGAWEA
FMVKNIVPKLALCLGELVVNPHQQLLEPFSWVMDWEGMLSVSTMVGLLDKNFFPKWLQVL
CSWLSNNPNYEEITKWYLGWKSLLSENLLSHPLVKEKLNEALDIMNRAVASGLGGYMQPG
ARENIAYLIQTERRKDFQCEPQPERRDVENSATRPPGTAAVPTSVPTNFKDLVQAKAEEN
GIVFMPLVAKRHMGKQLFTFGRIVIYIERGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccatttgtatgggcgtagaggtgatgaggaggaggatggtgtggaaatt
gaaaagtttgaggtgaccgaatgggacttggccaatgagttcaacccagacagacgcaga
cacagacagaccaaagaagaagcgacttatgggatttgggcagagcatgactctgatgat
gagcggcccagctttgggggtaaaagatcaaaagactattcagctcctgtgaactttgtg
agtgctggtctacgaaagactgcagctgaagagaaagcagagcaggagggttcagatgac
tccaatgatgatggagatgcacctcctcctccaccccgcgctgctgctcccaaaaaactc
caaacgggtgggagctttaagacatcccagaggtttgcaggtggtattagaacagggcag
gacttgggatcctgggagaaacacacacgaggcattggtcaaaaacttctgcaaaagatg
ggctacgttccaggaaaaggattgggcaaaaatgctcaaggtattgtgaacccaattgag
gctaaggtgcggaaggggaagggagcggttggtgcatatggtaatgagaggacccagcag
tccctgcaggatttccctgttgtagactctgaggaggaggaagagaaagagtttcagagg
gagttggggcaatggcgtaaagaaccaggaacggcaaagaaaaagcccaaatattcttac
aagactgtggaagaactgaaagctcatggcaaactggacaacaggagcatgagcagacct
gctggagaactggctcaggttaaggtaattgatatgacaggcagagagcagaaggtgtat
cacagttacagtcatatgagtcagaagcacagcgttcctgaggaggctcctttgagtgtg
accacgcgagaacagaaaacctctggcttctctttaccagagctggaacacaacctcaaa
ctgctcattgagctcacagagcaagacattctacagagtgcacgacgtctgcagcatgag
aaagacactgtggtgaccctgacccatgagagtgacgcgctgcaggtcaggctggcagag
gaggagcagtctcttggtcggctggagcaggtgatgaacctggtggatcgtttcgaagca
ggcgatagagagggcagccctgcgctcagccttcaggagtgtgctaaaatcttccagcag
ctgcagacagagttctatcaggagtacaaaaccttgggtttgggagatctggctgtttct
gttgtgcatcctttattaaaagaaagacttcgcagctgggatccactaaaggactgttca
gatggtttggaggaagtcggtcagtggagggccattcttgaaacctcacaatctcttcat
ggtggtccagacacttctaacatggacccctatcacaggttaatatgggaagtgtgggtt
ccagtcatgaggatctgtgtgtctcaatggcagccgagaaacgtgggccccatggtggac
tgtgtcgaatgctgggcccctgtattaccattgtggattctggatcatgttttggagcag
cttatttttccacgactacagagagaggtggacagttggaaccctctgactgacacagta
ccaatccattcatggatccatccctggctgcctctgatgcaaacccgtcttgagccactg
tacgcacccatccgcagtaaactagcccacgccctgcagcgctggcatcccagcgactcc
tccgccagactcattctgcaaccctggaaagatgtcttcacacctggtgcctgggaggcc
ttcatggtgaaaaatattgttcccaaactagctctgtgtttaggagagctggtggtgaat
cctcatcagcaactgctggagccgttcagctgggtgatggactgggaagggatgctttct
gtttccactatggttggcctgctggataagaatttctttcccaagtggctacaggtgttg
tgttcttggctcagcaacaacccaaactatgaggagatcactaaatggtatctgggctgg
aagagcttgctgtcagagaaccttctcagtcaccctttggtcaaagaaaaactgaacgag
gcccttgacataatgaatcgtgctgttgcctctggactaggtgggtatatgcaacctgga
gcaagagagaatattgcatatctgattcagacggagagaaggaaagatttccagtgcgag
cctcagcctgagcgccgtgacgtggagaattctgctacgcggccaccgggcaccgcagcg
gtaccaacatctgtacctaccaactttaaagatctagtccaggccaaagctgaggagaat
ggtatcgtcttcatgccactggtggctaaacggcatatgggcaaacagttgttcacgttt
ggcagaatagtcatctacattgagcgtggggtggtcttcgtccaaggtgaaaaaacatgg
gttccaacgtcactacagagtctaattgatatggccaaatga
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