Labeo rohita (rohu): 127155075
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Entry
127155075 CDS
T09007
Symbol
ddx19a
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03013
Nucleocytoplasmic transport
lroh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127155075 (ddx19a)
03015 mRNA surveillance pathway
127155075 (ddx19a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127155075 (ddx19a)
Enzymes [BR:
lroh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127155075 (ddx19a)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127155075 (ddx19a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127155075
NCBI-ProteinID:
XP_050953001
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All DBs
Position
23:7009052..7020600
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AA seq
474 aa
AA seq
DB search
MATDSWALAVDEQESTTKTIGNLRIMEAGDANLHLTEDDGDKSDEEEKEDRATQSLLNKL
IRSNVVNNTNQVEVLQRDPNSPLYSVKTFEELRLKPQLLKGVYEMGFNRPSKIQENALPM
MLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPSLKWPQCLCISPTYELALQTGKVIEQM
GKFYPEVKLAYAVRGHKMERGVKIKEQIVIGTPGTVLDWCVKLKLIDPKKIKVFVLDEAD
VMIATQGHQDQSIRIQRMLPKGCQMLLFSATFEDSVWKFAERVVPDPNIIKLKREEETLD
TIKQYYVLCNSKEDKFNALCNIYGAITIAQAMIFCHTRKTANWLAGQLSKEGHQVALLSG
EMVVEQRAAVIERFRDGKEKVLITTNVCARGIDVEQVSVVINFDLPLDKDGNPDNETYLH
RIGRTGRFGKRGLAINMVDSQRSMEILKTYERHFNKKIGRLDTDDLDEIEKIAN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgactcttgggctctagctgtggacgaacaagagtctacaaccaagactatt
gggaacttgcggattatggaagctggagatgcaaatttacatctgactgaagatgatggc
gacaaatccgacgaagaggaaaaagaggacagagccacacagtctctcctcaacaagctg
atcagaagcaatgttgtcaacaacacaaaccaagtggaggttcttcagagagacccaaac
tcaccactctattcagtcaagaccttcgaggagctgagactgaaacctcagttgctgaaa
ggcgtctatgaaatgggcttcaacagaccttctaaaatccaagagaacgcccttcccatg
atgctcgccgaaccacctcagaatctgatcgctcagtctcagtctggcactggtaaaaca
gctgccttcgtgctggccatgctcagtcatgtggacccaagcttaaaatggcctcagtgt
ttgtgcatttctcccacatatgaactcgctctgcagacgggtaaagtcattgagcagatg
ggcaagttttatccagaagtcaaactggcatatgctgttcgaggacataaaatggagcgt
ggcgttaagatcaaggagcagatcgtcattggcacgcctgggacggttctggactggtgc
gttaagctgaagctcatcgacccgaaaaagatcaaagtgtttgttctggacgaggccgat
gtgatgatcgccacacagggacaccaggaccagagcatccgcattcagagaatgctgccc
aaaggctgtcagatgttacttttctctgccacctttgaggactcagtgtggaagtttgca
gagcgggtcgtgccggaccccaacatcatcaagcttaaacgagaagaagagaccctggac
actatcaagcagtactatgtgctctgcaacagcaaggaggacaagttcaacgcactctgt
aacatctacggagccatcactatcgcgcaagctatgatcttctgtcacactcggaaaaca
gccaactggcttgccggccagctgtctaaagaaggccaccaggtggcgctgctcagtggg
gaaatggtagtcgagcagagagctgcagttattgaacgtttcagagacggcaaggagaaa
gttctcatcactactaatgtctgcgcaagaggtattgatgttgaacaagtgtcagtggtg
atcaactttgaccttccactggacaaagacggcaatccagacaatgaaacgtacctccac
cggatcggcagaactggacgtttcggtaaaagaggacttgctatcaacatggtggacagt
cagcgcagcatggagattctcaagacatacgagaggcattttaataagaaaattgggagg
ctggacacagatgatcttgacgaaattgaaaaaatcgccaactga
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