Labeo rohita (rohu): 127155078
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Entry
127155078 CDS
T09007
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127155078 (dhx35)
Enzymes [BR:
lroh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127155078 (dhx35)
Spliceosome [BR:
lroh03041
]
Complex C
Other components
Complex C specific factors
127155078 (dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
Cas3-like_C_2
AAA_19
AAA_29
AAA_30
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
127155078
NCBI-ProteinID:
XP_050953004
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All DBs
Position
23:29968804..29988559
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AA seq
699 aa
AA seq
DB search
MAAPHSTMKFWKPGAEAPGVCEERDLSTETTGSPIIFNPHTTLSIEKQRQRLPVFKHRNN
ILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAADGKVIGVTQPRRVAATSVAGRVAE
ERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPLLKKYSVIMLDEAHERT
LYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFHDFFNLNESGDPNKDTCAILTVEGRT
FPVDIFYTVSPVPDYVKATVETVMKIHETEDDGDVLAFLTGQEEVEKVVSMLQEQARTLS
RYGMKKHLCVLPMYAGLPYNEQMRVFERMPPTVRKVVVATNIAETSITINGVVFVIDCAF
VKLRAYNPRTAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFEKLPESTVPEM
QRSNLAPVILQLKALGIDNVLRFNFLSPPPAQSMVQALELLYALGGLDQYGRLTDPMGVR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVAPHNQKKSAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQDHFLNYKGLLRATAVREQLRHLLNKFKVPRTSSEGD
PDVILRCIVSGFFANAARMHHSGSYRTLRDDRELYIHPDSVLYGEKPPKWVVFNEVVQTS
KYYMRDVTAVESSWLVELAPHFYKQAKHGSLNSKRAKVF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccccactccaccatgaaattctggaaacccggcgcagaggctccaggtgtg
tgtgaggagagagatctgtccactgagaccaccggctcccccatcatctttaacccacac
accactctgtccatagagaaacagaggcagagactgcccgtcttcaagcacagaaacaac
atcctgtatctggtggagagtttccagacggtggtgattgttggagaaacaggatctgga
aaaagcacacaaatcccacagtatctgctggaggctggatgggcggcagacgggaaggtg
atcggtgtgactcaacctcgacgtgtggcagccacatctgtggccggtcgtgtggcagag
gagcgcggggcgtttcttgggcatgaggtgggctacaccatccgcttcgatgactgctct
gatcctcacgccacacgcattaagtttctgacagatgggatgttggttcgggagatgatg
tctgacccgctgttgaagaagtacagtgtgatcatgctggatgaagctcacgagcgaacg
ctttacactgacatcgccatcggcctcctgaagaagattcagaagaagcgcagagacctg
cgtttgattgtagcctcagccactctggatgccaagaaatttcatgatttcttcaacctg
aatgagtctggagacccaaataaagacacctgtgcaattttgacagtcgagggacgaact
tttcctgtggatattttctacactgtcagtcctgtaccagactatgtgaaggctacggtg
gaaaccgtgatgaagatccacgagacggaggatgatggagatgtgctggcctttctcaca
ggacaggaggaggtggagaaggtggtgtctatgctccaggaacaggcccggactttgtcc
cgttacggcatgaagaagcacctgtgcgtgctgccaatgtacgccggcctgccctataac
gaacagatgagagtgtttgagaggatgccccctactgtcagaaaggtggtggtcgccacc
aatatagccgagacgtccatcaccattaatggcgtggtgtttgtgattgactgtgcgttt
gtgaagctgagggcgtataatccgcgcacagcgatcgagtctctgatcgttacgcccatc
tctaaagcctccgcctgtcagagagccggaagagccgggagaaaccgtgcagggaagtgt
ttccgcctctatacagaggaggactttgagaagttgcccgagtcgacggttcctgagatg
cagcgctcgaatctggctccagtcatcctgcagctcaaagctctgggcatcgacaatgtg
ctgcgattcaacttcctgtctcctcctcctgctcagtccatggttcaggccctggagttg
ctctacgctcttggaggtctggatcagtacgggcgtctcactgaccccatgggtgtgcgg
atggccgagtttcctctcagccccatgtttgccaagatgctgctggaatcaggaaacttt
ggctgctccaaggagattgtcaccatagcagccatgatgcaaatacaaaacattttcgta
gcgccccacaatcagaagaaatcagctgcgcgggagcacaggaagtttgctgtggctgaa
ggggatcatctcaccatgctgaatgtttatgaggctttcataaagcatcagaagagctct
cagtggtgtcaggatcatttcctcaactacaaagggctcctccgggccacggccgtacgg
gagcagctgcgacacctcctcaacaagttcaaggtgcctcggacctctagtgaaggtgat
ccggatgtgattctcagatgtatcgtgtctggattttttgcgaatgcggctcgaatgcat
cactccggctcctacaggactctccgtgatgacagagaactgtacattcaccctgattcg
gtgctgtatggagaaaagcccccaaaatgggtcgtcttcaatgaggtggttcagaccagc
aagtactacatgagggacgtgacggcggtcgagtcctcctggctggtggagttggcgcct
cacttttacaaacaggccaagcacgggtctctgaacagcaaacgggccaaagtcttctga
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