Labeo rohita (rohu): 127155304
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Entry
127155304 CDS
T09007
Symbol
cntn3a.1
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127155304 (cntn3a.1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lroh00537
]
127155304 (cntn3a.1)
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
Contactins
127155304 (cntn3a.1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lroh00537
]
Others
127155304 (cntn3a.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set_CD47
Tissue_fac
fn3_2
Herpes_gE_N
NDNF
Fn3_nematode
Nuc_sug_transp
Motif
Other DBs
NCBI-GeneID:
127155304
NCBI-ProteinID:
XP_050953393
LinkDB
All DBs
Position
23:23550333..23639134
Genome browser
AA seq
1028 aa
AA seq
DB search
MGLSWKLLVLQLFMGCLSEGSGPLRPVFTKQPGSIVFPLHLNEPSREVTFSCEAQGHPPP
SYRWKMNDSFISPQPGSRYSISGGNLRISQLNKEEDAGIYQCLASNSFGTILSREASLHI
AYLEEFKTQRRSPVSVREGQGVVLLCGPPAHMGELTFSWIFNEYPSFVKQDTRRFVSQKT
GSLYIAKVEPSDVGNYTCVVTNTVTQSRVQGPPTPLILRSDGIMGEYEPKIEVQFPEVLA
VAKGLTVKLECFALGNPVPAITWRRPDGVPFPRKVDVSKSSGVLEIPYFQQEDAGPYECT
AENSRGKNTVKGRLSFYAPPHLVEKPQDVQKAIDESLLWECKASAKPKPSYRWLKNGELL
ESFEDRIQVVNGALSISSLTLSDTGMYQCIAENRHGRVFANTELRVIAVAPDFSNSVLKA
QTLARQGGDVLIECRPRMSPRGMISWRKGKEALRESHRVSVLDNGSLRISNITKLDAGLY
TCVARNQFGVASSAGTLVVKEPTIITSKAMQLDVTVGESVVIPCQVSRDPSLDVRFTWFF
NEQLINFGSHGGYFEKVGGTSAGDIMIRNIQLRHAGRYTCAVQTKVDSASIATDVVVRGP
PDPPLDIKVDEVTETTSFVSWSPGPDNHSPVFAYNIQIRSPFSLGWQAAKTVPESLGGKQ
LTARVVELSPWVEYEFRVLATNSIGTGEPSKPSQKIRTKDTLPRTTPARVSGGGGSRSEL
VITWEPVPEELQCGPGFGYVVAFRPLGGQSWMQAAVTSPDASRYIFKNESIPPFSPFHVK
VGVYNNKGEGPFGSVTTIYSAEEEPSRAPSRVRAKSLSASEVEVSWKPLPWSTSRTRIMG
YELRYWSTKDRPDTASVMRTVGNRTSAVIRGLDPSSTYYIKLKAYNSAGVGPDSAVVNVT
TKRPPPSQSPVKVTWNTTDSKLILKWDHVKSLENESEVMGYKVMYKQSRQSRPSVVETNS
TSLELSLPVDEDYIIQIKPVSEGGEGSSSKQITIPRIAVAHAIGFAPERKALPVVVTLAL
YCTVRTFL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggggttgtcatggaaactgctggtactgcaattattcatgggatgcctttcagaaggc
agcggccctctgaggccagtattcaccaaacagccaggaagtattgtattccctctccat
cttaatgagcccagccgggaggtcaccttcagctgtgaagcccagggacatccgccccca
tcctacaggtggaaaatgaacgacagcttcatttcccctcagcctggctctcgatacagc
atctcaggaggaaaccttcgaatcagccagctcaataaggaagaggatgctggtatttac
caatgtctggcctccaactctttcgggaccattctcagcagagaagctagtcttcacatt
gcttatctggaggagtttaaaacacagaggagaagtccagtgagtgtcagagaggggcaa
ggtgtggttcttctctgtggccctccagcgcacatgggagagttgaccttttcctggatc
ttcaacgaatatccctcatttgtgaagcaagacacgcggcgctttgtgtcacagaaaaca
ggcagcctatacatcgctaaagtggagccctcagacgtgggaaactacacctgtgtcgtg
actaacactgtgacccaaagcagagtgcagggacctcccacgccactcatactccgcagt
gatggcattatgggagaatatgagcccaaaattgaggtccagtttccagaagttttagct
gttgccaaagggttgacagtcaaactggagtgcttcgctttgggaaatccagtacctgct
atcacctggagaagaccagacggagttccttttcccagaaaagtggatgttagcaaatcc
agtggcgtgttggagatcccttatttccaacaggaagatgcagggccatatgaatgcaca
gctgagaactccagaggcaaaaacacagtgaaggggcgactctccttctacgcaccccct
catctggtggagaagcctcaggatgtgcagaaagccattgatgaatctctgctgtgggag
tgtaaggcgagcgccaagcccaaaccttcgtacaggtggctgaagaatggagagctgctc
gagtccttcgaggacagaatccaggtggtaaacggggcgttatccatcagcagtctgacc
ctgtcagatactgggatgtaccagtgtatcgctgagaatcgtcatggcagagtgtttgcc
aacactgaactcagagtcattgcagtggcacccgatttctccaatagtgtgctaaaggca
cagacactggctcggcagggtggagatgttttgattgagtgcaggccccgcatgtccccg
cgcgggatgatctcctggaggaagggcaaagaagccctgcgagagagccacagagtctcc
gtgctggataatggcagtctacggatttccaacatcaccaaactcgatgcaggtctttac
acttgtgtggcgagaaaccagtttggagtggcaagcagtgcaggcacactagtggtgaaa
gagccaaccatcatcacttctaaagccatgcagctggatgttacagtgggagagagtgtt
gttattccatgccaggtgtctcgtgacccttccctggatgtgagattcacctggtttttc
aatgagcagctgatcaactttggaagccatgggggatattttgaaaaagttggtgggaca
tctgctggtgacattatgattcgtaacattcagctaaggcatgcaggaagatacacatgt
gccgtacagactaaagtggacagtgcgtctatagcgacagatgttgtggtacgaggtccc
cctgacccaccgctggacatcaaagttgatgaagtgacagagacaacgtcctttgtgtcc
tggagtccaggccctgataaccacagtcccgtctttgcttacaacattcagatccgaagc
cctttctctctcggatggcaggcggccaaaacagtgccagagtctctgggaggtaagcaa
ttgacagcccgtgtggttgagttgagtccatgggttgaatatgagttcagagtgctggcc
actaactccataggcaccggggaacccagcaaaccctcacaaaaaatcaggactaaggac
acattgccaagaacgaccccagccagagtcagtggaggaggtggcagtcgctcagagctt
gtcatcacttgggagccagtcccagaagagctacagtgcggtccaggatttggctatgtg
gttgcttttcgccctcttggtggtcaaagctggatgcaggcggccgtgacgtctcctgat
gcatctcgatacatcttcaaaaatgagagcatccctccattttctccatttcatgtgaaa
gtaggagtttacaacaacaaaggagaaggcccttttggatctgtgaccactatatattca
gcagaagaggagccgagtcgcgcccccagtcgtgtccgtgctaagagcctgtcagcctca
gaagtggaggtcagctggaagcctttaccgtggagcaccagtaggacacgcataatgggc
tatgagttgaggtactggagtaccaaggacagaccggacacagccagtgtgatgaggact
gtgggaaacaggacatctgctgtcattcgtggactggaccccagcagtacatactacatc
aaactcaaagcctataacagtgctggtgttggacctgatagtgctgtggtgaatgtcacc
actaagagaccaccaccgagtcagtctccagtgaaagtcacatggaatactacagactct
aaactcattctcaagtgggatcatgtcaagtctctggagaatgagtctgaagttatgggc
tataaggtcatgtacaagcaaagcagacagagtcggcccagcgtggtggagacgaacagt
acatctcttgagctttccctgcctgtggatgaggattacatcatccagattaagccagtc
agtgaaggtggagaggggagcagcagcaaacagattaccatccccaggatagcagttgca
catgcgattggatttgccccagagaggaaagcactaccagtagtcgtaacgctagcgctc
tactgtacggtgaggactttcttatga
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