Labeo rohita (rohu): 127155391
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Entry
127155391 CDS
T09007
Symbol
rreb1a
Name
(RefSeq) ras-responsive element-binding protein 1 isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127155391 (rreb1a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127155391 (rreb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-H2C2_5
zf-Di19
zf-C2H2_8
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
127155391
NCBI-ProteinID:
XP_050953503
LinkDB
All DBs
Position
24:27621688..27677600
Genome browser
AA seq
1697 aa
AA seq
DB search
MSRRKQPNPNKVKLMENSTEETRTESANCTRTREEAEQSDERQSPAPTRTHTEGSASVEE
EANEWENRQNGVDGEMEVSDGVDLSSINSMMNTVMKAAQLNGSVDSAHTTPNKVPVKSPS
TNRSGRKIQEAKDESGCIVCPLCDKSFQTQHQLTMHIRQHNTDSGTSDHSCSICGKSLSS
ASSLDRHMLVHSGERPYECSVCHQTFTTNGNMHRHMKIHEKDAASSIPNSPTLSPLKRRR
PSAHKRKLSHDEDTEKTEETSSKKVKEDSMVDEQSLNKGQEEVLTCPICFKNLTCRNDFD
AHMETHPDTTLRCDLCCISFRTHRSLLRHNAATHKQLPTDPSGRPFIQNNPSIPLGFNDL
AFIDFSCQKFPQIAQIWCETNLRRCTGKFHRFVCDTCDKAFPLSSALDLHKASHETSSGT
QETTSPLIIKEELPTPEKSSFMDSLGLQHISQAKPAPSEEDILQAKLDSIRVIHVDQNQS
SVPQEAGLVGGVNLSLVDPATLHGLSHQEALKLLSLQPFQTGFLVQPDGGMVVKPVCGES
SMELADIQQIIKVASAAPNQITLPPLSKAPCSAVQSGYKQMPPLKPKPLVAPRTSLVAST
PPPLLNTQQASLGCISPSLPPPASHPLKTVRDLSSSSSSSSANKQASAERIQMEAECMGD
AHTPMDMDERHIKQENGKLEETTGKKGTSQKGSYPCRFCDQVFAFSGVLQAHMRYHLGIL
PHQCNICDYVAPDKATLIRHLRTHSGERPYVCRLCHYPFTVKANCERHLRKKHMKNNRKE
IEKNIKYVTSSTSTADVLEQAGTSETTCRFCGDDLKTFRALQIHLRTHNGCQRKPFECKR
CGAAFLAKRNCIHHLLKQHPEVQEQDIEEHIITLLAPSTQNSPNPSPLNGVSPSTVMQPI
KVEDLSFYNVDMDQPLDFSNKSRGGSSAGSVSGSPGIKIEPVYYDSSMEPIDLSIPKNPV
KKLKQDIEAILPREVKKEQSSISILAQALQAEKSIDEKSQPLGCYQVPVALSSLSGSTNA
AGRLLRLKPLLPKPSSAAVKELPPLASIAQIISSVSGAPDLLKRDNTNSLQADSETHGKQ
ESPDILTEELSLESSKKRSRKRPSNSTLKEKPVMNATDPSIDLESSGEFASVERMLATTD
ANKFSAYLQTNTIELARKGGQQPGASDEKEVKDEKHLPAQQTIQPQQSKGKKNAYSNSVQ
KMTCPFCPRVFPWASSLQRHMLTHTGQKPYPCPQCDAFFSTKSNCERHLLRKHGISNRVL
RRNGAIPKTKEAEEGSPESAESTSETELLVSEAMDLTRSDPEKSVASDAEKPSPAKPTEA
AVVEPLPHKEDEDPIALESLKHIDTEKDDADSHSNKSLDLTFVSKPKDFKITEKDQPQSS
PATDGDMSDKATPQEESKFTCKTCKKSFRYAATLTRHEKVHQLDVASDSANGPEQILMKS
EDPIVPCENKKELTDEEVESVRKGTAENEGTGSVAESGSEEDKEERSDEEGAATEPKSAE
GEAEEPGSKPDKRKKVCSICNKRFWSLQDLTRHMRSHTGERPYKCQTCERTFTLKHSLVR
HQRIHQKLRGLDSDGSTCGVTAGPDEDGFSGRSASESECTPTSTNPPSENESELTDTVKG
EPASQEKEEDCAPSVPAVESEEFKPKEPPVEKQASDSPTASDEEPSEGFVQGLLEIHTEP
TTEHILPTPEPPLLGVE
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcgaaagcaacccaaccccaacaaagtcaaacttatggaaaattcaacagag
gagacaagaacagaatctgcaaattgcacccgaactagggaagaggcggagcaaagcgat
gagcgccagagccccgcccccacaagaacgcacacagagggttctgccagtgtagaggag
gaagcaaatgaatgggagaacagacagaatggagtagacggagagatggaggtatcagac
ggagtggacctgtcttccattaactccatgatgaacactgtgatgaaagcagctcagctt
aatggcagcgtagactccgcccacaccacgcccaataaggtgcctgtcaaaagccccagc
accaatcgcagtgggagaaaaatccaggaagccaaagatgagagcgggtgtatcgtctgt
cctctgtgcgataagagctttcagacccagcaccagctcaccatgcacatccgccagcac
aacaccgatagcgggacttcggaccattcttgcagtatctgcgggaagtctctgagctca
gctagctctctggatcgtcacatgctagtgcacagtggagagagaccctacgaatgcagt
gtgtgccatcaaaccttcaccaccaatggcaacatgcacagacacatgaagatccacgag
aaggacgcggccagctccatccccaacagtccaactctgtctccacttaagcgacggcgt
ccctctgcacacaaacgcaaactaagccatgatgaagacactgagaagaccgaagagacc
tccagcaaaaaggtcaaggaggatagcatggtagatgagcagagtttgaacaaaggacag
gaagaagtcttgacctgtcctatctgcttcaagaacctcacctgcagaaacgactttgac
gcccacatggaaacccatcctgacactacactgagatgtgacttatgctgcatctcgttc
cggacacaccgaagtttgctccgccataatgcagctactcataagcagctacccacagac
cccagtggacgaccatttattcagaacaacccatccatccctcttggctttaatgatttg
gctttcattgacttctcatgccagaagttccctcaaattgcccagatttggtgtgaaacc
aaccttcggcgatgtactggcaaattccatcgttttgtatgcgacacatgcgataaggca
ttccctcttagctcagctctggacttgcacaaagcctcacatgagacttccagtggcacc
caagagacaacttcacccttaattataaaagaggagcttcccactcctgagaaaagcagc
ttcatggactccttgggcttgcagcacatctctcaggctaagcctgccccctcagaagag
gatatcctgcaggccaagctagatagcattcgggttatccacgtggaccagaatcagtcc
agtgtacctcaggaggctggccttgttggaggggttaacctgtcccttgtagacccagcg
actcttcatggtctgtcccatcaggaggctctcaaactgctgtcccttcagcccttccag
actggttttctggtgcagccagatggtggcatggtagtgaagccagtttgtggtgaatcc
agtatggaacttgctgatatacagcaaataatcaaagtagcttccgctgctcctaaccag
atcactcttccacccttatccaaggcgccttgtagtgctgtgcagtcgggctacaaacaa
atgcctccgcttaagccaaaacccttggtggctcccagaaccagtttggtagcttcaact
ccaccacccctgttgaacacccaacaagcttccctgggctgtatcagccctagcctccca
ccccctgccagccatcctctcaagacagttcgggacctctcctcatcttcctcatcttct
tctgccaacaagcaagcttctgcagagaggatacaaatggaggccgagtgcatgggagat
gcccataccccaatggacatggatgaaagacatatcaaacaggagaatggcaaattagaa
gagaccactggaaagaagggaacatctcaaaaaggttcgtacccctgccgattttgtgac
caggtgtttgcgttttctggtgtgctgcaggcacatatgcgatatcatttgggcatccta
ccccaccaatgcaatatctgcgactatgtcgccccagacaaggcaacgctgatccgccat
ttgagaacgcacagtggtgagcgtccctatgtctgccggctctgtcattacccatttact
gtcaaggctaactgtgagcggcaccttcgcaaaaagcacatgaaaaacaatcgcaaggag
atcgagaaaaacattaagtatgttacctcgtccacttccacagcagacgtactggagcag
gctggaactagtgaaactacttgccgcttttgtggggacgacctaaagaccttccgggcc
ctgcagattcacttgcgcacacacaatggctgccagcgaaagccatttgagtgtaagcgt
tgtggagcggccttccttgccaagcgcaactgtatccatcaccttctcaaacaacatcca
gaggtccaagagcaggatattgaagagcacataatcactcttctagcgccatcaacccaa
aatagcccaaacccatctcctctcaatggggtttctcctagcactgtaatgcagcctatc
aaagttgaggaccttagcttttacaacgtagatatggatcaacctctggacttctctaac
aaaagtcgcgggggcagcagtgctggaagtgtgagtggatctcctgggatcaaaattgaa
cctgtctactatgactctagcatggaaccaattgacctctctattccaaagaatcctgtg
aagaagcttaaacaagacattgaggccatattgccacgagaggttaagaaagaacagtca
tccattagcatacttgcacaggctctccaggccgaaaagtccattgatgagaagtcccaa
cctcttggatgctaccaggtccctgttgctttgtcgtccctgtctggtagcactaatgct
gcaggaaggctcttgcgtttgaaacccctgcttcctaaaccttcctctgctgctgtgaag
gagcttccaccactagcatccattgctcagatcatttcctctgtttctggtgcccctgac
cttcttaaacgagacaacactaatagtcttcaggctgattctgaaacacatggcaagcaa
gaatcaccggatattttgacagaagagctctcactagagagctcaaagaagaggtccagg
aaaaggccttccaacagcacactgaaagaaaaacctgtgatgaatgccacagacccaagt
atagatttggagtctagtggggagtttgctagtgttgagaggatgttggcaaccactgat
gccaacaagttcagcgcctatcttcagaccaacacaattgagttggcaagaaaaggcggg
cagcagccaggtgctagtgacgagaaagaggttaaagatgagaaacacttgccagcccag
cagactatccaaccccaacagtccaaaggaaagaagaacgcatactcaaattctgtgcaa
aagatgacttgccccttttgtccaagagttttcccttgggccagctcacttcaacgccac
atgttaacacacacaggtcagaagccatatccttgtccccagtgtgatgccttcttctcg
accaagtctaactgtgagcggcatcttttacgcaagcatggcatttccaacagagtgctt
agacgcaatggtgcaatacccaagactaaggaagcagaggaaggctcaccagagagtgca
gagagcacatctgagactgagcttcttgtgagtgaggcaatggatctcacaagatcagac
cctgagaaatctgtagcatctgatgctgagaaaccttcaccagctaagccgacagaggca
gccgtggtagagcctcttcctcacaaagaagatgaagacccaatagccctcgagtctttg
aagcacattgacacagaaaaagatgatgccgattcccatagcaataagagtcttgacttg
acctttgtttccaagccaaaggatttcaagatcactgagaaagaccagccacagtcctcc
cctgcaacagatggtgatatgtctgacaaagcaacacctcaggaggagtccaaattcacc
tgcaagacttgcaagaagagcttccgctacgctgccaccttgaccagacatgagaaagtt
caccagctggatgtagcatcagactcagcgaatggacctgaacaaatcctcatgaaatca
gaagatccaattgtgccttgtgaaaacaagaaagagcttacagatgaagaggtggagagt
gtaaggaagggcacagctgagaacgagggaacgggcagtgtggcggagagtgggtctgag
gaggataaagaggagagaagtgatgaagagggagctgcaactgaaccaaagagtgctgag
ggagaggccgaagaacctggcagcaagccagacaagaggaaaaaggtgtgcagtatatgc
aacaaacgtttctggagccttcaggacctcaccagacacatgcgctctcatacaggcgag
aggccttacaagtgccagacatgtgagcgcactttcaccctcaagcacagtttggtccga
catcagcgaatccaccagaaactacgtggactggatagcgatggttcgacttgtggggtc
acagctggtccagacgaggacggcttcagtgggcgttcggctagcgaaagcgagtgcaca
cccaccagcaccaatccaccctcagagaacgaaagtgaattaacagacactgtgaagggg
gaaccagcatcacaggagaaagaggaggattgtgcaccctctgtacccgctgtggaatct
gaagagtttaaacccaaagaacctccagtagagaaacaagcatcggattcacccaccgct
tccgacgaagagccgtcggagggattcgtccaaggcttactggagatccacaccgagccc
actactgagcacattttgcccacccccgagccgccacttcttggcgtggagtga
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integrated database retrieval system
