Labeo rohita (rohu): 127155448
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Entry
127155448 CDS
T09007
Name
(RefSeq) ankyrin repeat and fibronectin type-III domain-containing protein 1 isoform X1
KO
K24478
ankyrin repeat and fibronectin type-III domain-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127155448
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
127155448
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Gene cluster
GFIT
Motif
Pfam:
fn3
Ank_2
Ank_4
Ank_5
Ank
Retrotrans_gag
Antimicrobial15
Motif
Other DBs
NCBI-GeneID:
127155448
NCBI-ProteinID:
XP_050953598
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Position
24:complement(2843782..2937887)
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AA seq
1357 aa
AA seq
DB search
MASFGKLTDYFNRRRSRDELMARRDGRRSGSYCCTVAEARSLERRLQRPLLAKSRTLPSI
PQSPAAVRVQQSENICERQQRPRVPSSPGGLEACTLPPAGDMWRLEDENEADVAPGAGDP
RLRSQSPFSHFRRRAAYLRKSISADDHLGESEFEPAQPEGRSFADPKVKLKRKFSLGSID
RKGTRQRRTESGIVKFTQRLSLKDKHCKEDRSLSSRPPAYRRRSLSVDWAESKMTQQIPD
PHPLIPRKYSSTSCSSPPSAARRLYRNLSGKFRTANLAMDDTTLPSQSDKDHSHKTTMFQ
GNEALFEAVEHQELDVVESLLNTFSLEELDLNTPNSEGLLPLDIAIMTNNVPMAKLLLRA
GAKESPHFLSLESRAAHLASLVQEAEHRIAELVAQVTGEEPGEREESNRERQLKTWEWKL
RLYKRMQTGYTHASPPEPPSVVHLSVSSSTSLRVYFQEPLCHNSAVITKYRVSWSSVPSF
TPLLGETVIEDVTHLHYDITGLPAGTCCYVQVSAYNMKGWSSPQISEPACATVSSWREVD
GLPPRQQGLKEALEQLLGQIKGAHRHCACHEQCKAPSNTRKHSVSKSLRHLFQPTSKFVK
NLKRGLYLACIFYKDENVLVTPEDQLPVVEVDDSYSCHAQDLLWFTKVSHLWEELTWMQQ
CISPAHASSSCTLQTRLKLLQAAAQLQALLGTVDLGQVYFEPIKDKNGNAVLVLMKDVSA
CAPLEGVRWIPVSKFQLQRRSSSSSSDEPSALETLLTTLHEKLAYHRRSRKCLSPGLYLG
YLKLYTSVDQIRMLVSHKHPNVLCHVKIRDNGHVSREEWQWLQSLSSLEDSAKVCDDVQS
APHRLLLDLRTAAKDLLAHINIPNHQAQDFRVYVKEVVELGGGVSFLLLLPPCEEVCSPP
GQNHLCSPRSGFFTLPLQIFELVHFEAYCPSFIGLYCRVSALLALESLMSQQTLREAFSE
SELFAAKQKHQQVEEYLQHLEDLWRDARWMVVLQSARYKHQSSGVSLGWIIDFSKESIPE
KPASTSSQMDYLPSPTPSPESTRKHNDSHGLSDEDNSSEVFLTTDSEYSSSVAQSTRELD
LIPPSPTSFRSVTSTHPSSSSQSSPRSSQPDVLQTGGGMSRREHVSAFDSDFILPSRQIE
LLRVTEKRTALCVRTSSLEYPPPVSMPTTPTSSSSQKRWTRPSSFDLCFSALEPRPVPVR
TLSEDSGVQRLSTHSAGSSPHRPCHSTLRVYPQYRTGLPKETSVKLRVTPETSAKEMVRL
VVQEINAVCHHLQKAAQQCTCVAGQCGYPSCASEVCVYGSEQLEHFGLVLLVEGREKWLQ
DDFCPLTLQNPWTRGKLCVRFKEYSPLALQYSRATTV
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtttcgggaaacttacggattactttaaccgtcggcgttccagggatgagctc
atggctcggagggacggtcgtcgcagtggcagttactgctgcacggtagccgaggccagg
tctttggagagacggctacaaaggcctctcttggccaaatccagaacattacccagcatc
cctcagtcccctgccgccgtccgcgtgcagcagtcggagaacatttgtgaacgtcaacag
cgtccgcgtgttccctccagtcctggtggtcttgaagcgtgtacgctgcctcccgcaggc
gacatgtggcggctggaagatgaaaatgaggccgacgtggctccgggtgccggcgacccg
aggctgcgctctcagtcgccgttctcgcatttccggcggcgggccgcgtatctgaggaaa
agcatctcggctgacgatcacctgggagagtcggagtttgaacccgcccagccggagggg
aggagcttcgccgatccaaaagtcaaactgaagaggaagtttagtctgggctccatcgac
agaaagggaacacggcagagaaggactgagtctgggatcgtgaagttcacccagagactc
tctttgaaggacaaacactgcaaggaggacaggagtctgtcatccagacctccggcctac
aggaggcgctctctcagcgtagactgggccgaatccaaaatgactcaacagattccagac
cctcatcctctgattccacgtaaatactccagcacgtcatgttcgtctccgccaagcgcc
gcgcgacgcctttacagaaacctgtctggaaaattccgcacagccaacctggctatggat
gatacgacgctcccgagccagtcagacaaggaccattcgcacaaaaccaccatgttccag
ggaaacgaggctctgtttgaagccgtggagcatcaggagctggacgtcgtggagtccctg
ctgaacaccttcagtctggaggagctggacttaaacacacccaacagtgaagggctgctg
ccgctcgacatcgccatcatgaccaacaacgtccccatggccaaacttctgctgagagcc
ggggccaaagagagtccccactttctaagtcttgaaagcagagccgctcacctggcctcg
ctggtgcaagaggcggagcatcgcatagcagagctggttgcccaggtgacgggggaggag
cctggggagagggaggagtcaaacagagagagacagttaaaaacgtgggaatggaagctc
cgcctctacaagcgcatgcaaacgggatacacacacgccagtcctcctgagcctcccagc
gttgttcatctgtccgtcagcagtagcaccagtctcagagtttattttcaagagcctctc
tgtcacaactctgcggttattaccaaataccgcgtgagctggagcagcgttccttcattt
actccattactgggtgagacggtcattgaagacgtgactcatctccactatgacatcact
ggacttccagcgggtacatgctgttatgtccaggtatcagcatataacatgaagggatgg
agttcacctcagatatctgaacctgcttgtgctacagtctcaagttggagggaggtggac
ggccttccgccccgccagcagggtctgaaagaggcattagagcagctcctggggcaaatt
aaaggagcacaccgtcactgtgcctgccacgaacaatgcaaagccccgtcgaacaccagg
aaacactctgtgtctaaaagtctgaggcacctcttccagcccaccagcaaatttgtcaaa
aatctgaaaagaggcctttatctggcctgtatattttataaagatgaaaacgttctggtg
actccagaggatcagctgcctgtcgttgaggtggacgactcgtacagctgtcacgcacag
gatttactctggtttacgaaggtgtcacatctgtgggaggagctcacctggatgcagcag
tgcatcagtcctgcacacgcctccagttcctgcacgcttcagacgcgcctcaaactgctg
caggcggctgcacagctgcaggcgctcctcggcaccgtggatctgggacaggtgtatttt
gagcccatcaaggacaagaatggtaacgcggtgttggtgctgatgaaggacgtgagcgcg
tgtgcgccgctggaaggcgtgcgctggattcccgtcagtaaattccagctgcagcgtaga
tcttcctcttcttcatcagacgagcccagtgcactggagacgcttctcaccacactgcat
gagaagctggcgtatcaccggcgcagcaggaagtgtctgtctccaggtttatatctgggt
tacctgaagctgtacacctcagtggaccagatcaggatgctcgtgtcacacaaacaccca
aacgtactgtgccacgtcaaaatacgagacaacggccacgtctccagagaagaatggcag
tggcttcagtcgctgagttcgctggaggacagcgcgaaggtgtgcgacgatgtccagagc
gctccacatcgcctcctactggacctgcggaccgcagctaaagatttactcgcccacatc
aacattcccaaccaccaggcacaggatttccgtgtgtatgtgaaggaggtagtagagttg
ggagggggcgtgtccttcctgttgctcctcccaccgtgtgaggaggtgtgttctcctccc
ggacagaatcatctctgctcgccgcgctctggattcttcaccctgccgctgcaaatcttt
gaattagttcacttcgaggcgtactgccccagtttcatcggcctgtactgccgcgtgtcg
gcgctgctggctctggagtcgctgatgtcccagcagactttgcgcgaggcgttctccgag
tccgagctcttcgccgccaagcagaaacatcagcaggttgaggagtatttgcagcatctg
gaggacctgtggcgtgatgcgcggtggatggtggttctccagtcggcccggtataagcat
cagagctctggagtgagtctgggctggattattgacttctccaaagagagtattcctgaa
aaaccagcttccacttcctctcagatggactacctgccctcaccgaccccgtcaccggag
agcacacgcaaacacaacgattcccacggtctgtcggatgaggataactcatcggaggtg
ttcctcaccaccgatagcgagtacagctccagtgtggcccagagcaccagagaactggac
ctgattccaccgtctcctaccagcttcagatccgtaacatccacacacccttcctcctcc
tcgcagtcctcgcctcgatcctcacagccggacgtgctgcagaccggaggagggatgagc
agacgcgaacacgtgagcgcgttcgatagcgacttcatcctgccgagccgtcagatcgaa
ctgctgcgggtcacagagaagagaacggcgctgtgcgtccgcaccagcagtctggagtac
ccgcctcccgtctccatgccaaccacacccaccagctcctccagtcaaaagcgatggaca
cgcccctcctccttcgacctctgcttctccgccctcgagccccgccctgtgcctgtgcgc
accctatcggaggacagcggcgtccagcgactctccacccactctgccggttcatcccct
cataggccgtgccacagcacactgagagtgtacccacaataccgcaccggcctacccaaa
gaaaccagtgtcaaattacgcgtgactccggagacgtcggctaaagagatggttcgtctg
gtggtccaggagatcaacgccgtgtgccatcacctgcagaaagcggcgcagcagtgcacg
tgtgtggcgggtcagtgcggatacccgtcctgcgcgtctgaggtgtgcgtgtacggcagc
gagcagctcgagcacttcggcctggtcctgctggtggagggcagagagaaatggctacag
gacgatttctgcccgctcacgctacaaaacccatggacacgcggcaaactctgcgtccgc
ttcaaggagtattcaccgctcgcgctgcagtacagcagagccacgactgtttga
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