Labeo rohita (rohu): 127155509
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Entry
127155509 CDS
T09007
Name
(RefSeq) guanine nucleotide exchange factor VAV3 isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127155509
09142 Cell motility
04810 Regulation of actin cytoskeleton
127155509
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
CAMSAP_CH
SH3_1
CH
SH2
SH3_9
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
SH2_1
Prok-RING_1
C1_2
LRIM1_dimer
SRA1
LZ3wCH
NTP_transf_6
PHD_3
Motif
Other DBs
NCBI-GeneID:
127155509
NCBI-ProteinID:
XP_050953709
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All DBs
Position
24:8197594..8305365
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AA seq
831 aa
AA seq
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MEHWRQCALWLINCKVLPPNHRVTWESSQVFDLAQTLRDGVLLCQLLNNLRPQSINLREI
NLRPQMSQFLCLKNIRTFLHACSEIFGMKKSELFEAFDLFDVRDFGKVMDTLSKLSHTHI
AQQTGIRPFPTEESVEDEDIYNHLEDLIDENGVEDEEDLYDCVYDDDEGGEVYEDLMKVE
LVQPQRQAETDIRSCCLMEIKQTEEKYTETLDSIEKFFMKPLGQSLSGVDIEKVFINIPD
LVKVHTSLLREVQDSVLMHNASNLYQIFIKYKERLVLYGKYCSQVESAIACLDDICKNRE
DVRQMLELCSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTHDATDKSNLRQALDA
MKDLAQYVNEVKRDIETLRDIDQYQKSIENLNQSLRNYGRPKGDSEVRVASVDKRAKQDR
HIFLFDAAVIVCKRRGDNYEMKEVIDLHSFKITNNPTSERENRKWCHGFYLTHNQGQNGF
EFFFKTKELKKKWLEQFGMALSNICPESGKSNFHEFRMHTFETTTSCSSCKMLLRGVFYQ
GYRCSKCGAGAHKECLGRVDVCVKHSADSSSFGSQIGKTPCRGGDTGLPKMTVIRNYYGV
PSPLCGPPLNIQVGDVIEVIEANVRSCWWKGKVLATKEVGFFPSDAVKPCPCVPKPVDYS
SQPWFAGPMERLQAEAALLNRRSSTYLVRHRSREFNEYAISIKYNNDVKHIKILTKEGFF
HIAENRKFRSILELIEYYKHHSLREGFRTLDTTLQFAYREPENGANMFTPKVMGVAIARY
DFSSRDTRELTLQEGDVVKIYSKTGANGWWRGEVNGRVGWFPSTYVEEGEE
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggagcattggagacaatgtgcgctatggctgatcaattgcaaggtgctgccaccgaac
catcgggtgacatgggagtcctctcaggtgttcgacctggcgcagaccctgcgggatggg
gtccttctgtgccagcttctcaacaacctgagaccacagtccatcaacctgagggagatc
aacctgagacctcagatgtcacagttcctctgcttgaagaacatcaggacatttttgcac
gcctgctcagagatatttggcatgaagaagagcgagctgtttgaggctttcgatttgttt
gacgttcgagatttcggaaaggttatggacacactgtccaaactgtctcatacacacatt
gcacagcagactggaataaggccgtttcccacagaagagagtgttgaggatgaagacatt
tataaccatctagaggatctgatagatgagaatggtgttgaagatgaggaagatctctat
gactgtgtgtacgatgatgatgagggaggagaggtgtatgaagacctgatgaaggttgag
ctggtacaaccacagagacaggcagagacggacattcgaagctgttgtctgatggaaatc
aaacagactgaggagaaatacacagagacgctggactccatagagaaattctttatgaag
cccctgggacagtcactgtctggtgtggacattgaaaaagtgttcatcaatataccagac
cttgtgaaagtgcacacaagtcttctgagggaggtccaggattcagtgctcatgcataac
gccagtaacctgtaccagatctttataaaatacaaagaaagattagtcctatatgggaaa
tactgcagtcaagtagaatcagccatcgcgtgtttagatgacatctgtaagaacagagag
gacgtcaggcagatgttagagttatgttccaaacgagccaataatgggaagtttactctg
agagatctgctggtggttccaatgcagagagtcctgaagtatcatctgcttctacaggaa
ctggtgaaacacacccatgatgccacagacaagagtaatttaaggcaagcgctggacgcc
atgaaggatctagctcagtatgtcaacgaggtgaagagagacatcgagactctacgagac
attgaccagtaccagaaatccatagaaaaccttaatcagtctctccgtaactacggaaga
ccgaaaggtgacagcgaagtgcgagtagcttcagtcgacaaacgagccaaacaagacagg
cacatcttcctgtttgatgccgccgtgatcgtatgcaaacgacgcggagataactacgaa
atgaaggaggtgattgacctccactccttcaagatcaccaacaacccgacctcagagaga
gaaaaccgaaagtggtgccacggattctacctcacacacaatcagggtcagaacggcttt
gagttcttctttaaaaccaaggagctgaagaagaaatggctggagcagtttggcatggct
ttatcgaacatctgtccagagagcgggaaaagtaatttccatgagttccgtatgcacacc
tttgagacaaccacatcctgcagctcgtgtaaaatgctgctgagaggagtcttctatcaa
gggtaccgttgctccaaatgtggtgctggcgcccataaggagtgtcttggtagggtggac
gtctgtgtcaaacacagtgcagattccagctctttcggatcacagattggaaaaactccc
tgtcgtggaggagacacaggtttacctaagatgacggtcatccgtaattattatggagtt
ccaagccccctctgtggcccaccgcttaacatccaggtcggtgatgtcatcgaggtgatc
gaggcaaacgtccgtagctgctggtggaagggtaaagtcctggcaactaaggaggttggc
ttctttccaagcgacgcagtgaagccttgcccatgtgtacccaaacctgttgactactct
tctcagccttggtttgcaggcccgatggagaggctgcaggcagaggcagcgctactcaac
aggaggagcagcacatacctggtccgtcacagaagccgagagtttaacgaatatgctatc
agcatcaagtacaacaacgacgtgaaacacatcaagatcttaacaaaggagggattcttc
cacattgcggaaaacaggaagttcaggagcattttagagctgatcgagtattacaaacat
cactctctgcgggaaggattcaggacacttgataccacactgcagttcgcctaccgagag
ccggagaatggagccaacatgttcactcctaaggtgatgggtgtggcgatcgcccgctac
gacttcagctctcgggacacgcgggaactgactctgcaggagggcgacgtggtgaagatc
tacagcaaaactggagccaatggctggtggaggggtgaagtcaatggacgggtgggctgg
ttcccctccacgtacgtagaagaaggcgaggagtga
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