Labeo rohita (rohu): 127155518
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Entry
127155518 CDS
T09007
Symbol
fars2
Name
(RefSeq) phenylalanine--tRNA ligase, mitochondrial isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127155518 (fars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lroh01007
]
127155518 (fars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127155518 (fars2)
Enzymes [BR:
lroh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
127155518 (fars2)
Amino acid related enzymes [BR:
lroh01007
]
Aminoacyl-tRNA synthetase
Class II (U)
127155518 (fars2)
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
127155518 (fars2)
Prokaryotic type
127155518 (fars2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
tRNA-synt_2
7TM_GPCR_Sru
Motif
Other DBs
NCBI-GeneID:
127155518
NCBI-ProteinID:
XP_050953725
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All DBs
Position
24:complement(27133586..27296126)
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AA seq
462 aa
AA seq
DB search
MATHGSATMTFYNISQTLLKHIVRQWPANCQWAGSLAVSHKLHRCRGLSTDSRPQISENS
VEVFSHVYPRDDMTNVTAKILSKVGCQLHNRPHHPLWLIKERIKDHFYRSYVGRTGNPLF
SVHDNLSPVVTVEQNFDSLLIPPDHPSRKKGDNYYLNRTHMLRAHTSAHQKELVRSGLDR
FLLAGDVYRRDEIDSSHYPVFHQMEGVRLFSNHELFARVENGEELSLFESGGRRTPQKQE
THTLEAVKLVEFDLKQALTRLMRHLFGEDLEIRWVDCYFPFTHPSFEMEVRFQGDWLEVL
GCGVMEQELVCSAGAGNKMGWAFGLGLERLAMVLFGIPDIRLFWSEDERFLKQFRLSDIY
QPVTFQPLSKYPPLFNDISFWLPAEGYTENDFYDLVRSIGGDLVEKVTLVDEFTHPKTNR
ASHCYRVAYRHMERTLSQEEVRIIHAAIEQAAEKELGVQGRY
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcatggatcagctactatgacgttttacaatatttcccagactctcctcaaa
cacatagtccgtcaatggccagctaactgccaatgggctggttctctcgccgtgtcccac
aaactccatcgatgtcggggcctgtcgacagacagtcggccgcagattagtgaaaactca
gtagaagtttttagccatgtctacccacgagatgacatgaccaatgtgacagctaaaatc
ttgtccaaggtcggctgccagcttcacaaccggccacaccaccccctgtggcttattaaa
gaacgcatcaaagaccatttctaccgctcatacgtcggacgtacaggaaacccactcttc
tccgtacatgacaatctcagcccggtggtgacggtggagcagaacttcgacagtctgctc
attcctccagaccatcccagcaggaaaaaaggagacaattactacctgaaccgcacacac
atgctgcgggcccacacctccgcccaccagaaagagctggtgcgttcaggtctggaccgc
ttcctgctggctggagatgtgtatagacgagatgagatcgactccagccactatcctgtc
ttccatcagatggagggagtgcgacttttctcaaaccatgagctgtttgcccgagtagag
aatggcgaagagctgtctttgtttgagagcggtggccgccgcacacctcagaagcaggag
acgcacacgctggaggctgtcaaacttgtggagttcgatctgaaacaggctctcacgcgc
ctcatgcgacacctttttggggaagatttggagatccgctgggtggactgctacttccct
ttcacacatccctcctttgagatggaggtgcgcttccagggcgactggttggaggtgtta
ggctgtggggtgatggagcaggaactggtctgctcagctggtgctgggaataagatgggc
tgggcttttggtctggggctggagaggttggccatggttctgttcggcatccctgacatc
cggcttttctggagcgaggatgaacgcttcctcaagcagttccgcctgtctgacatctat
cagcccgtcaccttccagcctctcagtaagtacccaccgctcttcaatgacatctctttt
tggctgccggctgaaggttacacagaaaacgacttctacgacctggtgcgcagcatcgga
ggagacctggtggagaaggtcacgctggtggacgagttcacacacccaaagacaaacaga
gcgagccactgttaccgcgtcgcataccgtcacatggagaggaccctgagccaggaggaa
gtgcgtatcatccacgcagccattgagcaggcagctgaaaaagaactgggagtgcaggga
agatactga
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