KEGG   Labeo rohita (rohu): 127155639
Entry
127155639         CDS       T09007                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04137  Mitophagy - animal
lroh04144  Endocytosis
lroh04145  Phagosome
lroh04148  Efferocytosis
lroh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    127155639 (rab5c)
   04145 Phagosome
    127155639 (rab5c)
   04137 Mitophagy - animal
    127155639 (rab5c)
   04148 Efferocytosis
    127155639 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127155639 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lroh04131]
    127155639 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lroh04147]
    127155639 (rab5c)
   04031 GTP-binding proteins [BR:lroh04031]
    127155639 (rab5c)
Membrane trafficking [BR:lroh04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    127155639 (rab5c)
 Endosome - Lysosome transport
    127155639 (rab5c)
Exosome [BR:lroh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127155639 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   127155639 (rab5c)
  Exosomal proteins of colorectal cancer cells
   127155639 (rab5c)
  Exosomal proteins of bladder cancer cells
   127155639 (rab5c)
GTP-binding proteins [BR:lroh04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    127155639 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase MCR_beta AAA_16 BrnT_toxin
Other DBs
NCBI-GeneID: 127155639
NCBI-ProteinID: XP_050953950
LinkDB
Position
3:complement(24127413..24147434)
AA seq 221 aa
MAGRGGPARTNGAAPVGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKEL
QRQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKNEPQGGAGSGGRARGGVDLQEAAPQGRSGQCCGGGN
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcggggcgaggtggaccagcgcggaccaacggtgccgcccccgtcgggaacaaaata
tgccagtttaaactggtcttgctgggcgaatctgccgtgggcaagtccagcctggtgctg
cgtttcgtcaaaggccagttccacgagtaccaggagagcaccattggagctgctttcctc
acacagacagtctgccttgatgatacaacagtaaagtttgagatttgggacacagccgga
caggagcgatatcacagcctggctcctatgtactacagaggagcccaggcggccattgtc
gtctatgacattactaacacagacacattcactcgagcaaagaactgggtgaaggagctg
cagcgtcaggcgagtccaaatatcgtcattgctctggccggcaacaaggcagacttggcc
aacaagagagctgttgactttcaggaggcgcaggcgtacgcagatgacaacagcctactc
ttcatggagacgtctgcaaagaccgccatgaacgtgaacgagatcttcatggctatcgcc
aagaagcttccgaagaacgagccgcagggcggagcagggagcggcggacgggccagagga
ggggtcgacttacaggaggcagcacctcagggcagaagcggccagtgctgtggaggcggc
aactaa

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