Labeo rohita (rohu): 127155639
Help
Entry
127155639 CDS
T09007
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04137
Mitophagy - animal
lroh04144
Endocytosis
lroh04145
Phagosome
lroh04148
Efferocytosis
lroh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127155639 (rab5c)
04145 Phagosome
127155639 (rab5c)
04137 Mitophagy - animal
127155639 (rab5c)
04148 Efferocytosis
127155639 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127155639 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127155639 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127155639 (rab5c)
04031 GTP-binding proteins [BR:
lroh04031
]
127155639 (rab5c)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
127155639 (rab5c)
Endosome - Lysosome transport
127155639 (rab5c)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127155639 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
127155639 (rab5c)
Exosomal proteins of colorectal cancer cells
127155639 (rab5c)
Exosomal proteins of bladder cancer cells
127155639 (rab5c)
GTP-binding proteins [BR:
lroh04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
127155639 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
MCR_beta
AAA_16
BrnT_toxin
Motif
Other DBs
NCBI-GeneID:
127155639
NCBI-ProteinID:
XP_050953950
LinkDB
All DBs
Position
3:complement(24127413..24147434)
Genome browser
AA seq
221 aa
AA seq
DB search
MAGRGGPARTNGAAPVGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKEL
QRQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKNEPQGGAGSGGRARGGVDLQEAAPQGRSGQCCGGGN
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgaggtggaccagcgcggaccaacggtgccgcccccgtcgggaacaaaata
tgccagtttaaactggtcttgctgggcgaatctgccgtgggcaagtccagcctggtgctg
cgtttcgtcaaaggccagttccacgagtaccaggagagcaccattggagctgctttcctc
acacagacagtctgccttgatgatacaacagtaaagtttgagatttgggacacagccgga
caggagcgatatcacagcctggctcctatgtactacagaggagcccaggcggccattgtc
gtctatgacattactaacacagacacattcactcgagcaaagaactgggtgaaggagctg
cagcgtcaggcgagtccaaatatcgtcattgctctggccggcaacaaggcagacttggcc
aacaagagagctgttgactttcaggaggcgcaggcgtacgcagatgacaacagcctactc
ttcatggagacgtctgcaaagaccgccatgaacgtgaacgagatcttcatggctatcgcc
aagaagcttccgaagaacgagccgcagggcggagcagggagcggcggacgggccagagga
ggggtcgacttacaggaggcagcacctcagggcagaagcggccagtgctgtggaggcggc
aactaa
DBGET
integrated database retrieval system