Labeo rohita (rohu): 127155759
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Entry
127155759 CDS
T09007
Symbol
spata13
Name
(RefSeq) spermatogenesis-associated protein 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127155759 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127155759 (spata13)
Membrane trafficking [BR:
lroh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127155759 (spata13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_2
PH
SH3_9
Phycobilisome
Motif
Other DBs
NCBI-GeneID:
127155759
NCBI-ProteinID:
XP_050954173
LinkDB
All DBs
Position
24:13475930..13488897
Genome browser
AA seq
788 aa
AA seq
DB search
MDVFAYMHCVPSSTWCLFIVCLFSVYGLKRGRMMILRLRQKSQKRLSKVMRSQPLLLHLS
QTPVPQNPPLVTPTTPISPPFASDSPASIVPRKRAGRCRPRPVSDYGQLASSKYCIPEED
RESETMDYTSQKDYNTNGSYTESSRPENGHVCTQTESRKRRPISVIGGVDMFSSPTAEQK
DDTESLPSPVSRPPVPSHRVPPYRAVSARLRPCIFSQSTPIGLDRMGRRKGRRVLSDGSS
DPMLDDSVSEEDGSFEELTEGTPYLQPEVDLFTLNQYIQSGHAVYAEALWDHVTMEEQEL
AFKAGDVIRVLDVQEQDWWWGAVGDREAWFPSSFVRVRVNQEDSSSDSVEIAPDAEESVP
PDAHKQNSQHRQQMRANVVKEIMETERVYIKHLKDICEGYIRQCRKHPGMFTDAQLKTIF
SNIEDIYRFQRKFLKDLEKQYNPKNPHLSEIGSCFLQQEDGFAIYSEYCNTHPVACAELQ
RLMKQSRYKHFFEACRLLQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHSDYEG
VCAAHKAMKNVASLINERKRRLESIDTIAHWQVAILHWAGDDVLQRSSELIHSGELTRIV
RPGKTQQRSYFLFDHQLVFCKKDVLRRDLLHYRGRMDTDLVELVDLPDGRHAEMGLLKNA
FLLRHAENLNVLCVLCCKKNQDKQRWLQAFARERRRVQEDQEMGMEITEAQRKQAVHNAR
KSKQGKMKKINYSDHPGPPHHQPLHPLHQRHVTVPTSIPQQQVFSLAEPKKKPSHLLYSL
ARSALFRK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtttgcatatatgcattgtgtaccttcttcaacatggtgcttgtttattgtg
tgccttttcagtgtctatggactgaagagagggagaatgatgatcttgaggcttcgtcag
aaatcacaaaagcgtttgtcaaaagtgatgagatctcagccgctgctgcttcacctgtcc
caaacacctgttcctcagaatccccccctggtaactccaacaactccaatctctccaccc
tttgccagtgactctcctgcttccatagtgcccaggaaacgggcaggtcgctgcagaccc
cggccagtgtctgactatggccagctggccagttcaaagtactgcatcccagaggaggac
agggagtctgagactatggactacacttcccaaaaggactacaataccaatggcagctac
acagagagcagcagacctgaaaatggtcatgtgtgcactcaaacagagagcagaaagaga
cggccaatctctgttattggaggagtggatatgttttcatccccaaccgctgagcagaag
gacgacactgaaagcctgccttctccggtatctcgtcctccagtgccctctcacagagtg
cctccataccgggctgtgtctgcccgtctgagaccctgcatcttctcccaaagcacacct
atcggtctcgataggatggggcggcgcaaagggcgcagagtgctcagcgatggcagctct
gatccaatgcttgatgacagtgtaagtgaggaggacggcagctttgaagaactgactgaa
ggaacaccatatctacaaccagaagttgatcttttcacgctaaatcagtacatacaatcg
ggacatgccgtgtacgcagaggctctgtgggaccacgtcacaatggaagagcaggagctg
gccttcaaagccggggatgtaatccgggttctggatgttcaggaacaggactggtggtgg
ggggcggtgggcgaccgcgaggcctggtttccctctagttttgtgcgagttcgggtgaat
caggaggattcaagcagtgacagtgtggaaatcgcaccggatgccgaggaatctgtccca
ccagatgcacacaaacaaaactcgcagcaccgacaacagatgagagccaatgtggtcaaa
gagatcatggaaacagagcgcgtttacataaaacacctcaaagatatctgtgagggatat
atccgtcagtgtagaaagcaccctggcatgtttactgacgcgcagctaaaaacaatcttc
agcaacattgaggacatctacaggttccagagaaagtttctcaaggacctagaaaagcag
tacaaccccaaaaaccctcatctcagtgagattggctcctgcttccttcagcaggaggat
ggtttcgccatatactctgaatactgtaatacacatccagtggcatgtgcagaattacag
cgactgatgaaacaaagcagatataaacacttcttcgaagcctgtcgtctattacagcag
atgatcgacatctccattgctggcttcctacttacgcctgtacagaagatttgtaaatac
cctcttcagctgggagagcttttgaaatacacacccaaagaccacagtgactacgaaggg
gtgtgtgccgcacataaagcaatgaagaatgtagcaagtctgataaacgagagaaaaagg
cgacttgagagcatcgacaccatcgctcactggcaggtggccatcctccactgggcgggt
gatgatgtgttacagcgaagctctgagctcatccactccggcgagttaacgcggatagta
cggcccggtaagacacagcaacgcagctacttcctgtttgaccaccagctggtgttctgt
aagaaagacgtcctacggagagacctgctacactaccgtggccgtatggacactgaccta
gtcgagctagtcgacctgcctgatggacgacacgctgagatgggcctcctgaagaacgcg
tttctcctacggcacgctgagaatctgaacgtgctgtgtgtgttgtgctgcaaaaagaac
caggacaagcagcgatggctgcaagcgtttgctcgagagcgcagacgggtacaggaagac
caagagatggggatggagattactgaggcccagaggaagcaagcagttcacaacgccagg
aaatccaaacaaggaaaaatgaaaaaaattaattattctgatcatcccgggcctcctcac
catcaaccgctacatccactccatcaacgtcatgtgaccgtgccaaccagcatcccccag
caacaggtcttctctttagcagagccaaagaagaaaccgtcccacctgctgtactcgctt
gcacgcagtgccctcttcaggaaatga
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