Labeo rohita (rohu): 127155805
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Entry
127155805 CDS
T09007
Symbol
wdr90
Name
(RefSeq) WD repeat-containing protein 90
KO
K24759
WD repeat-containing protein 90
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127155805 (wdr90)
Cilium and associated proteins [BR:
lroh03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127155805 (wdr90)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_EML
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
CFA20_dom
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Beta-prop_IFT122_2nd
Beta-prop_WDR75_2nd
PRKCSH-like
DUF6386
Motif
Other DBs
NCBI-GeneID:
127155805
NCBI-ProteinID:
XP_050954268
LinkDB
All DBs
Position
24:complement(3890588..3910564)
Genome browser
AA seq
1773 aa
AA seq
DB search
MSSRALWQQPYVNIFKHMKIEEWKKVSKEGDVTTYMDKSLKCSVFRIRGSIPASNYILLP
KTSSQSLGLTGRYLYLLFRPSPNKHFIVHLDIAAEEGQAIRVSFSNMFKEFKSTATWLQF
PFLCGAAHASVYENTASTAKQGLVGPAPPSTRWTCLTMDLRHVLSVYLNRTHSHLKSIKL
CANMTVKNIITSDLLFDPGLSFSEFRQSGLMLPDGTAPMPREMCFPVLKGQSWHDLYDYI
RFPSDGTKLPFDSIQKGSSSETKKVSAEKSPQKQASRAVNISKPVQDRVSLIQQITTPKP
ARRSKQRSAIQTKHLPELNYTHPGGSESPGSPGQRSTASEQVTVVRADDAGVHVYAHCED
DVYSHTTDSEEEITVINAGSPRPVSLSSDQPVKKPQKLFPDPILKLNRIVGFGGATMRCA
VWSSDGEEVVYPCHAIIVSMTVSSGQQRFFIGHTDKVSALALNTTSTVLASAQTGANSLI
RLWSYSGGVCQTIIPTHTHALNLLSFSQSGGVLCGVGKDSHNKTTVVLWNTRRVGEGSVV
PVLAKAHTDVDIQTMKIAFFDETRMVSCGLGNIRLWRVRGGSLRSCPVNLGQYHNLEFTD
LAFEQGHTQDRPVDERTLFVSSRSGHILEIDYVTMAIRNIRRLLPAQESHAHQREKQTFS
TGAGIAVNSISVCDEFCVTGSEDGFMRLWPLDFSSVFLEAEHEGPVSLVCVSSDGSRVLA
ATATGNLGYLDVNTRGYRTLMRSHTANVLGFSVDGVRRRVTTVSKDSTVRVWDMDTMQQL
YDFVSDDDESPCSVAFHPSMPLFACGSSSGTVRVFDIQTSSLIAQQRQHSGSVECVIYSP
DGQCLFSAGALGYLVLYNSSQHDHHVARVLSNVVAQGVNRGPDTLAVSSDSRCLALVGPT
EYIVTIMEAQSLNELLRVDVSILDVESTTLDSALNVCFSPTSLSHLLVTTSANKILWIDT
HTGQLLRQVSEVHKHPCVSLAVSEDGQYLLTAGQNSLKVWDYDMHLDVNSQVFIGHSEPI
RQVRFTPDQMGVVTAGDALFFWDFLAPPQEAVDYKSPDNKVPPRKSAHSWAELNRAELSN
ESPRKALFQPSSPPVMNFLSSAMKDSEGFLCDSTKLQLSPFEGRAHSPPPKHASFLRVTE
WVNDEDTPTFPANQSRTEKIQDGHTAVRPDCYKHFTPRFKTSVLDQTAVAPPSGQAGLSL
KAVIGYNGNGRNNMVWNPDTGLFVYSCGCVVVVEDLHTGSQKQWFGHTEEISTLAVTHDA
QTVASSSGGGASHSSLICIWNVSDGSCRNRLSYHKGAVQSLTFSRDDMYLLSVGDFSEPV
VALWSTRSFELLCNVQIAVPLHDASFCPFTANELTLIGSSAVVFTRIQTQDNSTELQVQK
VGLPDAVGQAEVTSLCYNTRRTLYTGTNSGHVCVWDCNTQRCFVTWEADGGEIGVLVCRG
SKLVTGSNTKKLRLWSVASVQNLSNTNNKRNRTQDDGAQVQLEQELLLDGTVVSAAFDEV
MDMGIVGTTAGTLWYINWADSTSIRLISGHKSKVNGVVCSPDEQHFATCGQDGSVRVWAL
QSHELLVQFQVLNQSCECVCWSPPRGAYEPGGRACVAGGYSDGTVRIFSLDSAEMELKLQ
PQPASVCALQYSHYGHVLLSGGCDGLLTVSSPVTGVTVRTIRDHKGAPITTVQCTSKQYK
EFGLDGNELWLAVSADRRVSIWAADWTKDKCELLDWLTFPAPSPPEDVLALPPSLAAFSP
SERGTVVYTGYAVEKEIIFYCLYKKQVLRTIFS
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagagctctgtggcagcagccatacgtgaacatcttcaaacacatgaagata
gaagaatggaagaaagtcagcaaagagggagacgtcaccacatacatggataagagcctg
aagtgttctgttttccggatccgtgggtccataccggccagtaactacatcctcttacct
aaaaccagcagccagtctctgggtctcactggccggtacctttacctgctgttcagaccc
agccctaacaaacacttcattgtacacctggacatcgctgctgaggagggtcaggcgatt
cgtgtgtcgttctctaacatgttcaaagagttcaagtcgacagcaacatggttgcagttt
ccttttttgtgtggagctgcacacgcttcagtgtatgagaatacagccagtactgctaaa
caaggtttagttggcccagctccgccgagcacaagatggacgtgcttgacaatggatctg
cgtcatgttctctcggtttacctcaacagaacacacagtcaccttaagagcataaaactc
tgtgccaatatgactgttaaaaacatcatcaccagcgacctgctttttgaccctggtctg
tcattttctgagttcaggcagtctggtttgatgttgccagatggcactgcaccgatgccc
agagaaatgtgtttccctgtgctgaaaggccagagctggcacgacttatatgattacatt
aggtttccctcagatggaacaaagttaccatttgattccatacaaaaaggatccagcagt
gaaactaaaaaagtctcagccgaaaagagccctcaaaaacaagcgagtcgtgctgtaaac
atcagtaaacctgtacaagaccgagtctccctcattcagcagattacaacccccaaacct
gcacgacgctctaagcaacgttcagcaatccagacgaagcatctgcctgagctgaattat
acacaccctggaggctcagagagcccggggtcaccaggtcaaaggtcgacggcaagtgaa
caggtcacagtagtgcgtgcagatgatgctggagtacacgtatacgctcattgcgaggat
gacgtctatagtcacacaacagacagtgaggaggaaatcacagtcattaatgcaggctct
cctcgacctgtctctctgtcgtctgaccaaccagtgaagaaacctcagaagttgtttcct
gaccccattctgaagctgaacagaatcgtaggcttcggaggcgctacaatgagatgtgct
gtgtggagttctgatggagaggaagttgtgtatccttgtcatgccattattgtcagcatg
accgtttcctccggacaacagagattctttatcggacacacagataaggtctcagctcta
gcattaaataccacttctacggtgttggcatcagctcagacgggcgcaaacagtctgatt
cgtctctggagctacagcggaggagtttgtcaaaccatcattcctacacacacacatgct
ctgaatctgctcagtttctctcagagtggaggagtgctgtgtggcgtagggaaagacagc
cacaacaaaactacggttgttctttggaacactcggcgtgtgggggaaggaagtgtggtt
ccagtcttggctaaagcacacacagatgtggacatccagacaatgaagatagcgttcttt
gatgaaacacgtatggtgtcgtgtggtttaggtaacatacgtctgtggcgtgtgcgtggc
ggttctctacgctcttgtccggtgaatctgggacagtatcacaatttagagtttactgac
cttgcctttgagcagggacacactcaggaccgtccagtggatgaacgcacgctgtttgtg
agcagtaggagtggtcacatcctggagattgattatgttaccatggcgataagaaacatc
aggaggctcctcccagctcaggagagccacgcccaccaaagggagaaacagacctttagc
acaggtgccggtattgcagtgaacagcatcagtgtgtgtgatgaattctgtgttactggt
tctgaggatggattcatgcgtctgtggcctcttgacttctcatcggttttcttagaggcg
gagcacgaggggcctgtcagtttagtgtgtgtgtcttcagatggctcaagagttctagca
gccacagccacagggaatcttggatatctggatgtcaatacccgcggttaccgtacactc
atgagatcacacacggcgaatgttttgggctttagcgtggacggcgttagacgacgggtc
accacagtgtccaaagacagcactgtacgggtgtgggacatggacaccatgcaacagctc
tatgattttgtttctgatgatgatgaaagtccctgttcagttgcgttccatcccagcatg
cctctcttcgcttgtggatcgagctctggaactgtcagagtgtttgatatccaaacatca
agcctaattgcccagcaaaggcagcacagtggatcagttgagtgtgtgatatattctccc
gatggtcagtgtttgtttagcgctggtgcacttggatacttggtgctttataactcttct
caacatgaccatcatgtggcccgtgttctgagtaatgtggttgcacagggtgtgaatcgt
ggcccagatactttggctgtgagctctgacagccgctgtctagcactggtcggaccgacc
gaatacattgtcacgatcatggaggcacagtcacttaatgagttactccgggttgatgtg
agtattctggatgttgagagcacaacgctggactcggccctgaatgtgtgtttctcaccc
acatcactgtcacacctgctcgtcactacatccgccaataagatcctctggattgacaca
catacaggacagctgctcagacaggtgtctgaggtgcataagcatccgtgtgtgtctctg
gcggtcagtgaagatggccagtatttgctgacggcgggtcagaactctctaaaggtgtgg
gactatgacatgcacctggatgtcaattcacaggtgttcattggtcactcagagcctatc
agacaggtgaggttcacacctgatcagatgggtgtggtcactgcaggcgacgccctcttc
ttctgggacttcctggcacctccacaggaagctgtagactacaagtctccagataataaa
gtcccccctcgtaaatcagctcacagttgggcagagctaaatagagcagagctgtccaat
gagagccctcgaaaggcattatttcagccctcctctccacctgtcatgaatttcctttcc
agtgctatgaaggacagtgaaggtttcctgtgcgattctactaaactgcagctcagtcct
tttgaaggccgtgcccactcccctcctcccaaacacgcctccttccttagagtgacagag
tgggtgaacgatgaggacacgcccacattcccagctaaccaatcaaggacagagaaaata
caagacggtcacacggcagtccgtccggactgttataaacacttcactccacgttttaag
acttctgtgctagatcagaccgcagtagctccgccctcaggacaggcggggctcagtctc
aaggctgtgattggttataatggcaatgggcgtaacaatatggtctggaatccagacaca
ggtttatttgtgtactcctgtgggtgtgttgtcgtcgttgaggatcttcacacaggctcg
cagaaacagtggttcggccacaccgaggagatttcaacacttgccgtcacccatgatgca
cagactgttgcatcttcgtcagggggcggagcttcacacagcagcctcatttgcatatgg
aatgtttcagatggctcctgtagaaatcgcctgtcctaccacaagggggcggtgcagagc
ttgacattttccagagatgacatgtacctgctctcagtgggtgatttttcggagccagta
gtggcgctgtggagcacacgatcatttgagcttctctgtaacgtacagatagccgtcccg
ctgcacgatgcttctttctgtccatttactgcaaacgagctgacgctcatcggcagcagt
gctgttgtgtttactcgaatacaaacacaggataacagcaccgaacttcaggtgcagaaa
gtgggcttacctgatgcagtcggacaggcagaggtgacgtcgctatgctataacactcgc
cggaccctgtacacgggcacaaacagtggccacgtgtgtgtgtgggactgtaacacacag
cgctgcttcgtgacctgggaagcagatggaggagagataggtgtgttagtttgtcgtggg
agcaagctggtcacgggaagtaacaccaaaaaattgagactgtggtctgtagcttcagtc
cagaatctcagtaacacaaacaacaagcgcaacagaacacaggatgatggagctcaggtg
cagctggaacaagagctactgttggatgggacagtggtcagtgcagcatttgatgaagtc
atggacatggggattgtgggtacgacagcaggaacgctgtggtacattaactgggccgac
agcaccagtatacggctgatcagtggccataagagcaaggtgaacggtgtggtttgcagt
ccagatgagcagcattttgccacctgtgggcaggacggcagtgtgagagtttgggcgctg
cagagccacgagctgctggtgcagtttcaggtgctgaaccagagctgtgaatgtgtgtgt
tggtctcctccgaggggtgcgtatgagcccggcgggcgtgcttgtgttgcgggcggttac
agtgacgggactgtgaggatcttcagcctggattcggctgagatggagctgaaactacaa
cctcagcctgcgtctgtgtgtgcgctgcagtactcgcactatggtcatgtgctgttgtct
ggtggttgtgatggtctccttactgtcagcagtcccgtcactggagtcactgtacgcacc
atccgtgaccataagggggcgcccatcactacagtgcagtgcaccagcaaacagtataag
gagtttggtctggatggaaatgagctctggttggccgtgagcgcagacaggcgtgtcagc
atctgggctgccgattggacgaaggataaatgtgagctgctcgattggctgacgtttcca
gcgcccagcccaccagaggatgtactggcattaccacccagtctggcagcgttcagccct
agtgagagaggaactgtggtttacaccggctacgcggtggaaaaagagatcatcttttac
tgcctttacaaaaaacaggtcttgaggacaatctttagctga
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integrated database retrieval system