KEGG   Labeo rohita (rohu): 127155805
Entry
127155805         CDS       T09007                                 
Symbol
wdr90
Name
(RefSeq) WD repeat-containing protein 90
  KO
K24759  WD repeat-containing protein 90
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:lroh03037]
    127155805 (wdr90)
Cilium and associated proteins [BR:lroh03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   127155805 (wdr90)
SSDB
Motif
Pfam: Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_EML WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 CFA20_dom EIF3I WD40_MABP1-WDR62_1st Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_IFT122_2nd Beta-prop_WDR75_2nd PRKCSH-like DUF6386
Other DBs
NCBI-GeneID: 127155805
NCBI-ProteinID: XP_050954268
LinkDB
Position
24:complement(3890588..3910564)
AA seq 1773 aa
MSSRALWQQPYVNIFKHMKIEEWKKVSKEGDVTTYMDKSLKCSVFRIRGSIPASNYILLP
KTSSQSLGLTGRYLYLLFRPSPNKHFIVHLDIAAEEGQAIRVSFSNMFKEFKSTATWLQF
PFLCGAAHASVYENTASTAKQGLVGPAPPSTRWTCLTMDLRHVLSVYLNRTHSHLKSIKL
CANMTVKNIITSDLLFDPGLSFSEFRQSGLMLPDGTAPMPREMCFPVLKGQSWHDLYDYI
RFPSDGTKLPFDSIQKGSSSETKKVSAEKSPQKQASRAVNISKPVQDRVSLIQQITTPKP
ARRSKQRSAIQTKHLPELNYTHPGGSESPGSPGQRSTASEQVTVVRADDAGVHVYAHCED
DVYSHTTDSEEEITVINAGSPRPVSLSSDQPVKKPQKLFPDPILKLNRIVGFGGATMRCA
VWSSDGEEVVYPCHAIIVSMTVSSGQQRFFIGHTDKVSALALNTTSTVLASAQTGANSLI
RLWSYSGGVCQTIIPTHTHALNLLSFSQSGGVLCGVGKDSHNKTTVVLWNTRRVGEGSVV
PVLAKAHTDVDIQTMKIAFFDETRMVSCGLGNIRLWRVRGGSLRSCPVNLGQYHNLEFTD
LAFEQGHTQDRPVDERTLFVSSRSGHILEIDYVTMAIRNIRRLLPAQESHAHQREKQTFS
TGAGIAVNSISVCDEFCVTGSEDGFMRLWPLDFSSVFLEAEHEGPVSLVCVSSDGSRVLA
ATATGNLGYLDVNTRGYRTLMRSHTANVLGFSVDGVRRRVTTVSKDSTVRVWDMDTMQQL
YDFVSDDDESPCSVAFHPSMPLFACGSSSGTVRVFDIQTSSLIAQQRQHSGSVECVIYSP
DGQCLFSAGALGYLVLYNSSQHDHHVARVLSNVVAQGVNRGPDTLAVSSDSRCLALVGPT
EYIVTIMEAQSLNELLRVDVSILDVESTTLDSALNVCFSPTSLSHLLVTTSANKILWIDT
HTGQLLRQVSEVHKHPCVSLAVSEDGQYLLTAGQNSLKVWDYDMHLDVNSQVFIGHSEPI
RQVRFTPDQMGVVTAGDALFFWDFLAPPQEAVDYKSPDNKVPPRKSAHSWAELNRAELSN
ESPRKALFQPSSPPVMNFLSSAMKDSEGFLCDSTKLQLSPFEGRAHSPPPKHASFLRVTE
WVNDEDTPTFPANQSRTEKIQDGHTAVRPDCYKHFTPRFKTSVLDQTAVAPPSGQAGLSL
KAVIGYNGNGRNNMVWNPDTGLFVYSCGCVVVVEDLHTGSQKQWFGHTEEISTLAVTHDA
QTVASSSGGGASHSSLICIWNVSDGSCRNRLSYHKGAVQSLTFSRDDMYLLSVGDFSEPV
VALWSTRSFELLCNVQIAVPLHDASFCPFTANELTLIGSSAVVFTRIQTQDNSTELQVQK
VGLPDAVGQAEVTSLCYNTRRTLYTGTNSGHVCVWDCNTQRCFVTWEADGGEIGVLVCRG
SKLVTGSNTKKLRLWSVASVQNLSNTNNKRNRTQDDGAQVQLEQELLLDGTVVSAAFDEV
MDMGIVGTTAGTLWYINWADSTSIRLISGHKSKVNGVVCSPDEQHFATCGQDGSVRVWAL
QSHELLVQFQVLNQSCECVCWSPPRGAYEPGGRACVAGGYSDGTVRIFSLDSAEMELKLQ
PQPASVCALQYSHYGHVLLSGGCDGLLTVSSPVTGVTVRTIRDHKGAPITTVQCTSKQYK
EFGLDGNELWLAVSADRRVSIWAADWTKDKCELLDWLTFPAPSPPEDVLALPPSLAAFSP
SERGTVVYTGYAVEKEIIFYCLYKKQVLRTIFS
NT seq 5322 nt   +upstreamnt  +downstreamnt
atgtcttcaagagctctgtggcagcagccatacgtgaacatcttcaaacacatgaagata
gaagaatggaagaaagtcagcaaagagggagacgtcaccacatacatggataagagcctg
aagtgttctgttttccggatccgtgggtccataccggccagtaactacatcctcttacct
aaaaccagcagccagtctctgggtctcactggccggtacctttacctgctgttcagaccc
agccctaacaaacacttcattgtacacctggacatcgctgctgaggagggtcaggcgatt
cgtgtgtcgttctctaacatgttcaaagagttcaagtcgacagcaacatggttgcagttt
ccttttttgtgtggagctgcacacgcttcagtgtatgagaatacagccagtactgctaaa
caaggtttagttggcccagctccgccgagcacaagatggacgtgcttgacaatggatctg
cgtcatgttctctcggtttacctcaacagaacacacagtcaccttaagagcataaaactc
tgtgccaatatgactgttaaaaacatcatcaccagcgacctgctttttgaccctggtctg
tcattttctgagttcaggcagtctggtttgatgttgccagatggcactgcaccgatgccc
agagaaatgtgtttccctgtgctgaaaggccagagctggcacgacttatatgattacatt
aggtttccctcagatggaacaaagttaccatttgattccatacaaaaaggatccagcagt
gaaactaaaaaagtctcagccgaaaagagccctcaaaaacaagcgagtcgtgctgtaaac
atcagtaaacctgtacaagaccgagtctccctcattcagcagattacaacccccaaacct
gcacgacgctctaagcaacgttcagcaatccagacgaagcatctgcctgagctgaattat
acacaccctggaggctcagagagcccggggtcaccaggtcaaaggtcgacggcaagtgaa
caggtcacagtagtgcgtgcagatgatgctggagtacacgtatacgctcattgcgaggat
gacgtctatagtcacacaacagacagtgaggaggaaatcacagtcattaatgcaggctct
cctcgacctgtctctctgtcgtctgaccaaccagtgaagaaacctcagaagttgtttcct
gaccccattctgaagctgaacagaatcgtaggcttcggaggcgctacaatgagatgtgct
gtgtggagttctgatggagaggaagttgtgtatccttgtcatgccattattgtcagcatg
accgtttcctccggacaacagagattctttatcggacacacagataaggtctcagctcta
gcattaaataccacttctacggtgttggcatcagctcagacgggcgcaaacagtctgatt
cgtctctggagctacagcggaggagtttgtcaaaccatcattcctacacacacacatgct
ctgaatctgctcagtttctctcagagtggaggagtgctgtgtggcgtagggaaagacagc
cacaacaaaactacggttgttctttggaacactcggcgtgtgggggaaggaagtgtggtt
ccagtcttggctaaagcacacacagatgtggacatccagacaatgaagatagcgttcttt
gatgaaacacgtatggtgtcgtgtggtttaggtaacatacgtctgtggcgtgtgcgtggc
ggttctctacgctcttgtccggtgaatctgggacagtatcacaatttagagtttactgac
cttgcctttgagcagggacacactcaggaccgtccagtggatgaacgcacgctgtttgtg
agcagtaggagtggtcacatcctggagattgattatgttaccatggcgataagaaacatc
aggaggctcctcccagctcaggagagccacgcccaccaaagggagaaacagacctttagc
acaggtgccggtattgcagtgaacagcatcagtgtgtgtgatgaattctgtgttactggt
tctgaggatggattcatgcgtctgtggcctcttgacttctcatcggttttcttagaggcg
gagcacgaggggcctgtcagtttagtgtgtgtgtcttcagatggctcaagagttctagca
gccacagccacagggaatcttggatatctggatgtcaatacccgcggttaccgtacactc
atgagatcacacacggcgaatgttttgggctttagcgtggacggcgttagacgacgggtc
accacagtgtccaaagacagcactgtacgggtgtgggacatggacaccatgcaacagctc
tatgattttgtttctgatgatgatgaaagtccctgttcagttgcgttccatcccagcatg
cctctcttcgcttgtggatcgagctctggaactgtcagagtgtttgatatccaaacatca
agcctaattgcccagcaaaggcagcacagtggatcagttgagtgtgtgatatattctccc
gatggtcagtgtttgtttagcgctggtgcacttggatacttggtgctttataactcttct
caacatgaccatcatgtggcccgtgttctgagtaatgtggttgcacagggtgtgaatcgt
ggcccagatactttggctgtgagctctgacagccgctgtctagcactggtcggaccgacc
gaatacattgtcacgatcatggaggcacagtcacttaatgagttactccgggttgatgtg
agtattctggatgttgagagcacaacgctggactcggccctgaatgtgtgtttctcaccc
acatcactgtcacacctgctcgtcactacatccgccaataagatcctctggattgacaca
catacaggacagctgctcagacaggtgtctgaggtgcataagcatccgtgtgtgtctctg
gcggtcagtgaagatggccagtatttgctgacggcgggtcagaactctctaaaggtgtgg
gactatgacatgcacctggatgtcaattcacaggtgttcattggtcactcagagcctatc
agacaggtgaggttcacacctgatcagatgggtgtggtcactgcaggcgacgccctcttc
ttctgggacttcctggcacctccacaggaagctgtagactacaagtctccagataataaa
gtcccccctcgtaaatcagctcacagttgggcagagctaaatagagcagagctgtccaat
gagagccctcgaaaggcattatttcagccctcctctccacctgtcatgaatttcctttcc
agtgctatgaaggacagtgaaggtttcctgtgcgattctactaaactgcagctcagtcct
tttgaaggccgtgcccactcccctcctcccaaacacgcctccttccttagagtgacagag
tgggtgaacgatgaggacacgcccacattcccagctaaccaatcaaggacagagaaaata
caagacggtcacacggcagtccgtccggactgttataaacacttcactccacgttttaag
acttctgtgctagatcagaccgcagtagctccgccctcaggacaggcggggctcagtctc
aaggctgtgattggttataatggcaatgggcgtaacaatatggtctggaatccagacaca
ggtttatttgtgtactcctgtgggtgtgttgtcgtcgttgaggatcttcacacaggctcg
cagaaacagtggttcggccacaccgaggagatttcaacacttgccgtcacccatgatgca
cagactgttgcatcttcgtcagggggcggagcttcacacagcagcctcatttgcatatgg
aatgtttcagatggctcctgtagaaatcgcctgtcctaccacaagggggcggtgcagagc
ttgacattttccagagatgacatgtacctgctctcagtgggtgatttttcggagccagta
gtggcgctgtggagcacacgatcatttgagcttctctgtaacgtacagatagccgtcccg
ctgcacgatgcttctttctgtccatttactgcaaacgagctgacgctcatcggcagcagt
gctgttgtgtttactcgaatacaaacacaggataacagcaccgaacttcaggtgcagaaa
gtgggcttacctgatgcagtcggacaggcagaggtgacgtcgctatgctataacactcgc
cggaccctgtacacgggcacaaacagtggccacgtgtgtgtgtgggactgtaacacacag
cgctgcttcgtgacctgggaagcagatggaggagagataggtgtgttagtttgtcgtggg
agcaagctggtcacgggaagtaacaccaaaaaattgagactgtggtctgtagcttcagtc
cagaatctcagtaacacaaacaacaagcgcaacagaacacaggatgatggagctcaggtg
cagctggaacaagagctactgttggatgggacagtggtcagtgcagcatttgatgaagtc
atggacatggggattgtgggtacgacagcaggaacgctgtggtacattaactgggccgac
agcaccagtatacggctgatcagtggccataagagcaaggtgaacggtgtggtttgcagt
ccagatgagcagcattttgccacctgtgggcaggacggcagtgtgagagtttgggcgctg
cagagccacgagctgctggtgcagtttcaggtgctgaaccagagctgtgaatgtgtgtgt
tggtctcctccgaggggtgcgtatgagcccggcgggcgtgcttgtgttgcgggcggttac
agtgacgggactgtgaggatcttcagcctggattcggctgagatggagctgaaactacaa
cctcagcctgcgtctgtgtgtgcgctgcagtactcgcactatggtcatgtgctgttgtct
ggtggttgtgatggtctccttactgtcagcagtcccgtcactggagtcactgtacgcacc
atccgtgaccataagggggcgcccatcactacagtgcagtgcaccagcaaacagtataag
gagtttggtctggatggaaatgagctctggttggccgtgagcgcagacaggcgtgtcagc
atctgggctgccgattggacgaaggataaatgtgagctgctcgattggctgacgtttcca
gcgcccagcccaccagaggatgtactggcattaccacccagtctggcagcgttcagccct
agtgagagaggaactgtggtttacaccggctacgcggtggaaaaagagatcatcttttac
tgcctttacaaaaaacaggtcttgaggacaatctttagctga

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