Labeo rohita (rohu): 127155841
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Entry
127155841 CDS
T09007
Symbol
yme1l1a
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127155841 (yme1l1a)
Peptidases and inhibitors [BR:
lroh01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
127155841 (yme1l1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_22
AAA_5
TIP49
RuvB_N
DUF815
Mg_chelatase
IstB_IS21
AAA_lid_PRS2_C
PT-TG
AAA_33
nSTAND3
AAA_28
AAA_18
Zeta_toxin
AAA_14
AAA_17
AAA_25
FAD-SLDH
AAA_7
PhoH
ABC_tran
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
127155841
NCBI-ProteinID:
XP_050954327
LinkDB
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Position
24:complement(6005162..6421795)
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AA seq
730 aa
AA seq
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MFSLPTTFQSQGTVPLTHLINVVQYLKSSANTAVTTSVQSLQRDLSPEHDPLLSEPKVSL
KDLGLSELRFSHVHNVLERLLPSIDPEEKSISSAAQNSTAWRTSHISAPSFFQNKYGFSH
KHMGLFGSPLFRRQSSSPLQAACVDLHHLQLWVQNRGFKTMRSKTRHLPSDFEGPVDGEN
YTPAFMKSLLMKEKRDMGSLEQLLKQNNLPESQQDAFKTGFTEGFMKAQALTQRTQDSVK
RTRLIIFVLLLVGSYGVFKSPLFSGKGSFSDTVRFRTTSGLDSAVDPVQMKNVTFEHVKG
VEEAKNELQDVVDFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYA
SGSEFDEMFVGVGASRIRNLFKEAKASAPCVIFIDELDSVGGKRIESPMHPYSRQTINQL
LAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQVTVPRPDVKGRTEILEWYLKKI
KVDSAVNAEIIARGTVGFSGAELENLVNQAALKAAADGKDLVTMKELEFAKDKLLMGPER
RSVEIDKRNKMITAYHESGHAIVAYYTKDAMPINKATIMPRGPSLGHVSLLPENDRWSET
RAQLLAQMDVSMGGRVAEELVFGNDHITTGASSDFDGATKIAQMMVTRFGMSDKLGVMTY
NDLTNYSPETQAAVEQEVRVLLQNSYERAKKLLKTYSKEHKLLADALLTYETLDAKEIKM
ILEGKSLDPR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcttcctacaacctttcagtcccagggaacagtgcctttgacccatttgatc
aatgtggtccagtacctgaagagttcagccaacacagccgtaaccacatcagtgcagagt
ctacaaagagacctttcacctgaacatgacccacttctcagtgagcccaaagtaagctta
aaggacctgggtctgtcagagctgaggttcagtcatgtacacaatgttctggagcgcctg
ctgccttctatagatccagaggagaaatccatctccagtgctgctcagaactcaacagca
tggaggacatctcacatttccgccccctccttcttccaaaacaaatacgggttttctcac
aaacacatgggactctttggctctccgctgtttcgtaggcaaagttccagccctctccag
gcagcctgcgtagatctgcatcatctgcaattatgggtccaaaacagaggtttcaagaca
atgaggtccaagaccagacatctgccgtctgattttgaaggtccagtagatggagagaat
tatacgccagcatttatgaagagcctccttatgaaggaaaagcgagacatgggaagtctt
gaacagttactgaaacagaataacttgccagaatctcaacaggatgcttttaagaccggc
ttcacagagggcttcatgaaagctcaggctttgacacagagaactcaagactctgtcaaa
aggacacgtctgattatttttgtcctcctactggtgggttcgtatggtgtgttcaaaagc
cctctcttttcgggtaaagggtcgttttccgacactgttcgtttccgcaccacctctggt
ctggattcagctgtggaccctgttcagatgaagaatgtcacctttgaacatgtaaaaggt
gtggaggaagccaaaaacgagcttcaggatgttgtcgattttttgcgaaacccccaaaaa
ttcactgtgctcggtggcaaacttcccaaaggtatcttgcttgtggggcctccaggaaca
ggaaaaaccctgttggccagagctgtagcaggtgaagcagacgtacccttttactacgcc
tccggctcagagtttgacgaaatgtttgtgggagtcggtgcaagtcgcatcagaaacctt
ttcaaggaagccaaagctagtgcaccatgtgtaatatttatcgacgagctggacagtgta
ggagggaagagaatcgagtctcccatgcacccatattcacgacaaaccatcaaccaactg
ctcgctgagatggatgggtttaaacccaatgaaggagtcattgtgattggagctacgaac
tttgctgaagctttggacaatgctctggtgagaccaggccggtttgacatgcaggtcacc
gtcccaagaccagatgtgaagggacgcacagaaatcctggagtggtatttgaaaaaaatc
aaagtggattccgctgttaatgcagagatcattgctaggggaacagtgggtttctctgga
gccgaattggagaacctggtgaaccaggcagcgctgaaagcagcagccgatgggaaagac
ctagtgaccatgaaggagctggagtttgctaaggataagctcctcatgggcccagagcgc
aggagtgtggagatagacaagagaaataagatgatcacagcctatcatgagtccggacat
gcaatagtggcttattacaccaaagacgcaatgcctatcaacaaagctaccatcatgcca
cgcggcccctcacttggtcatgtatccttgctgccagagaacgatcgctggagtgagaca
cgggcacagcttcttgctcagatggacgtcagcatgggcggcagggtcgctgaggaactg
gtgtttggaaatgatcacattactaccggagcatccagtgattttgatggagccactaaa
atagcacagatgatggtgacacggtttggaatgagtgacaagctgggggtcatgacctac
aatgacctgacaaactatagcccggagacccaggctgctgtagaacaggaagtcagggtg
ctgttgcagaactcgtatgaaagggcaaagaagctactcaagacttacagcaaggaacac
aagctactagccgatgctctgctgacttacgagactctagatgcaaaggaaatcaaaatg
atcctggagggaaagtcactggatcccagatga
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