Labeo rohita (rohu): 127155972
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Entry
127155972 CDS
T09007
Symbol
abcd3a
Name
(RefSeq) ATP-binding cassette sub-family D member 3a isoform X1
KO
K05677
ATP-binding cassette, subfamily D (ALD), member 3 [EC:
7.6.2.4
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh02010
ABC transporters
lroh04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127155972 (abcd3a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127155972 (abcd3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127155972 (abcd3a)
Enzymes [BR:
lroh01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
127155972 (abcd3a)
Transporters [BR:
lroh02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD3 subgroup
127155972 (abcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
BrxL_ATPase
SMC_N
AAA_23
AAA_21
AAA_27
AAA_29
Rad17
nSTAND1
AAA_16
Motif
Other DBs
NCBI-GeneID:
127155972
NCBI-ProteinID:
XP_050954564
LinkDB
All DBs
Position
24:7186735..7200836
Genome browser
AA seq
657 aa
AA seq
DB search
MAAVSKYLTAKNSAVAGGVLLVLYFIKQRRRSAGLNRKKGSSNDLNNEQKDGKKERAAVD
KLFFIRIARILGIMVPRLFCKETWYLLLIAVMLVTRTYCDVWMIQNGTMIESAIIGRSTK
GFKKYLFNFITAMPVIALVNNFLKLGLNELKLCFRVRLTKHLYDEYLKGYTYYKMGNLDN
RIANADQLLTQDVEKFCNSVVDLYSNLSKPLLDIGLYIFKLTTAIGAQGPATMMTYLLIS
GLFLTRLRRPIGKMTVTEQKYEGEYRYVNSRLITNSEEIAFYNGNVREKQTIHSTFKKLV
DHLHNFIFFRFSMGMVDSIIAKYFATVVGYLVVSRPFLDLSHPRHLTSTHAELLEDYYQS
GRMLLRMSQALGRIVLAGREMTRLSGFTARITELMKVLKELNSGKYERTMVSQSEKDASE
KLTLIPGSGRIINVDNIIKFDHTPLATPNGDILIRDLCFEVKSGTNVLVCGPNGCGKSSL
FRVLGELWPLFGGSLTKPERGKLFYVPQRPYMTLGSLRDQVIYPDTHESQKKKGISDQVL
KEYLDNVQLGHILEREGSWDMVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVS
VDVEDYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMDGRGNYEFKPITAETVEFGS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcagtaagtacttgacagcgaagaactcagctgtagctggcggtgtccta
ctcgttctatacttcattaagcagagacgaagatccgcgggactgaacaggaaaaagggt
tcttcgaatgatctgaacaatgagcagaaggatggcaagaaagaaagagctgctgtggac
aagctctttttcatccggatcgcacggatccttgggattatggtgcccagattgttctgc
aaagagacatggtacctgctcctgatcgcggtgatgcttgtgactcgaacctactgtgac
gtctggatgattcagaacggcactatgattgaaagtgcgatcattggtcggtccactaaa
ggtttcaagaagtacttattcaactttatcacggccatgccagttatcgccctggtgaac
aacttcctgaagttgggcctgaatgagctgaagctgtgctttcgcgtgaggcttaccaaa
catctctacgatgagtacctgaagggatatacctactacaaaatgggaaaccttgataac
cgaattgctaacgctgatcagctgctgacgcaggatgtggaaaagttctgtaacagtgtg
gtggatctttactccaacctcagcaagcccttgttggatattggattatacatattcaaa
ctgacaacagcgatcggtgctcagggtcctgcaactatgatgacctacctgctgatctcc
ggcctcttcctgacccgtctgcgcaggccgatcggtaagatgacagtgaccgaacagaag
tatgaaggagaataccgatacgtcaactctcgtctcatcacaaacagcgaagagatcgcg
ttctacaatggaaatgtaagggagaaacagacaattcattcaactttcaagaaactggtc
gatcatctgcacaatttcatctttttccgtttctccatgggaatggtggatagcattatt
gccaagtattttgctaccgtggttggctatttagtcgtcagtcgtcctttccttgatttg
tctcaccctcgacatctgaccagcacacacgctgaactgctggaggactactaccagagc
ggccgtatgctgctgcgaatgtcgcaggcgttgggtagaatcgttcttgcaggcagagaa
atgacgcgtctgtcaggcttcactgctcgaatcactgagctcatgaaggtcctgaaagag
ctgaactctgggaaatacgaacgtaccatggtgtctcaatccgagaaagatgcttcagaa
aagcttacactgatacctggaagtggaagaatcatcaatgtagacaatatcatcaagttt
gatcacacacccctggctacacctaatggagacattctgatcagagatctgtgttttgag
gtgaaatccggaaccaatgttttggtgtgtggtcccaacgggtgcggaaagagctcactt
ttccgggttcttggagagttgtggccactgtttggtgggagtttgacgaaaccagaaagg
gggaagctcttctacgtccctcagaggccttacatgaccctcggctcactgagggatcaa
gtgatctacccagacacccatgagagccaaaagaagaaaggcatctctgaccaggtgctg
aaggaatacctggataatgtccagttaggtcacattttggagagagaggggtcgtgggac
atggttcaggactggatggatgtgctcagtggaggagagaagcagagaatggcgatggcc
aggctcttctaccataagccccagtttgccatcctggacgagtgcaccagtgccgtgagt
gtagatgtggaggattacatctacagtcactgcagaaaggttggcatcaccctgttcaca
gtctctcacagaaagtccctgtggaagcatcatgagtactacctccatatggacggcaga
ggaaactatgaattcaaacccatcaccgctgaaactgtggagttcggctcttag
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