Labeo rohita (rohu): 127156051
Help
Entry
127156051 CDS
T09007
Symbol
cldni
Name
(RefSeq) claudin i
KO
K06087
claudin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03272
Virion - Hepatitis viruses
lroh04382
Cornified envelope formation
lroh04514
Cell adhesion molecule (CAM) interaction
lroh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
127156051 (cldni)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127156051 (cldni)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127156051 (cldni)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127156051 (cldni)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127156051 (cldni)
04147 Exosome [BR:
lroh04147
]
127156051 (cldni)
Cilium and associated proteins [BR:
lroh03037
]
Other cilia and associated proteins
Stereociliary proteins
127156051 (cldni)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
127156051 (cldni)
Exosomal proteins of colorectal cancer cells
127156051 (cldni)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
L_HMGIC_fpl
Trp_oprn_chp
ATP1G1_PLM_MAT8
Motif
Other DBs
NCBI-GeneID:
127156051
NCBI-ProteinID:
XP_050954697
LinkDB
All DBs
Position
3:complement(20475167..20479102)
Genome browser
AA seq
211 aa
AA seq
DB search
MGSSGVQIVCMALGILGLIAAVVTIAVPRWKVSAFIGNNIITAQVQEEGLWMECVVQSTG
QQQCKAYESLLILSSDLQAARAMTIISCMLVVLSLLTLCAGADFTTCIENEEVKPKVSLV
SAVGLIVAGLLLIIPVSWAANNVVRDFNNPLVNQSQKRELGACIFVGWGGGVLLLLAGGL
LCCFSRPRSGGSSGTAKYYSNSASAPSKNYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgtctggtgtacagatcgtgtgtatggcactgggaattttaggtctcattgca
gcagtggtgaccattgctgttccaaggtggaaggtttctgcttttattggcaataacatt
atcactgcacaggttcaggaagagggcttgtggatggagtgtgtggttcagagtaccgga
cagcagcagtgtaaagcttacgaatcgctgctcatcctgagctctgaccttcaagcggcc
cgtgccatgaccatcatcagctgcatgctcgttgtcctgtccctgctcactttgtgcgcc
ggcgccgacttcaccacctgcatcgaaaacgaagaagtcaaacccaaagtgagtctggtg
tccgctgttgggctgatcgtcgcgggtttgttgctgatcatccccgtcagctgggccgct
aataatgtcgtgcgcgatttcaacaatccgctggttaaccaatctcagaagagagagctg
ggtgcctgtatctttgtgggctggggaggtggagtcctgctcctgctggctggaggcttg
ctttgctgcttcagcagaccccgctctggaggatccagcggaaccgccaaatactacagc
aacagcgcctctgcaccaagcaagaattacgtttag
DBGET
integrated database retrieval system