Labeo rohita (rohu): 127156057
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Entry
127156057 CDS
T09007
Symbol
pola1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127156057 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lroh03032
]
127156057 (pola1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
127156057 (pola1)
DNA replication proteins [BR:
lroh03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
127156057 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
127156057
NCBI-ProteinID:
XP_050954701
LinkDB
All DBs
Position
24:complement(12013728..12072441)
Genome browser
AA seq
1472 aa
AA seq
DB search
MAPVSNSDKDMDGGDCDTSDACGIATSRSRREXKEKVGRKSALEQLKRAKKGEKVKYEVE
EFTSVYEEVDEEQYSKMVRERQDDDWIIDDDGTGYVEDGREIFDEDLDDDALEKNPKSKQ
GGKGGDSKKNVKKVSVSKPNSIKSMFMNSNVKKPAEKHVDLSQDDLLGDILQDLHSEKPV
LLTPPPIITLKKKKTLGSPMNPFSVKPQVPKESPEVQMSKPRPVVTRVPPAEPSPRSSAH
VQPSKPAPTQIKKPKIEEPEEEAIEFDEMDFDEPMEAETIEEEPVKVKAEVETASTVKVE
PKTEPKDEMLISGLGGGMGWEKIEEGGPIETPVEVQVDSSQLPLVEGPDGDMVFRFYWLD
AFEDQYNQPGVVYLFGKVWIESAEAHVSCCVAVKNIERTMYLLPREHKVNLATGEQTDSP
VGMMDVYQEFNSLSEKFKIMKFKSKPVTKNYAFEIPDIPSQCEYLEVKYSAELPSLPSEL
KGSTFSHVFGTNTSSLEHFLLNRKIRGPCWLDVKTPQLSNQPISWSKVEAVAQKTDFISV
VKDLPPPPLVVMSISLKTVQNPKTHQNEIVSLAALIHHKFHLDKAPPRPPFQTHFCVVSK
PNDCIFPYDFKDAVRKKNGIVEIAGTERALLGFFLAKMHKIDPDVLVGHDIFGFDLEVLL
QRINVCKVPHWSKIGRLRRANMPKLGGRSGFAEKSATCGRLVCDVEISAKELIRCKSYHL
TELAAQILKTERVVVPPENIRNFYGDSPHLLYFLELTWMDAKLILQIMCELNVLPLALQI
TNIAGNVMSRTLMGGRSERNEFLLLHAFHEKNFIVPDKQFFKKPQQDQGEDEDIESGKGK
STKTRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVERGATNAQKK
SEEDDDEIPELPDPSLEMGILPKEIRKLVERRRQVKQLMKQADLNPDLCLQYDIRQKALK
LTANSMYGCLGFSFSRFYAKPLAALVTHKGREILMHTKEMVQRMNLEVIYGDTDSIMINT
NSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALMVEPQGDGKYTT
KQELKGLDIVRRDWCDLAKECGNYVIGQILSDQNRDTIVENIQKHLIEVGEKVANGSIPL
NMFEIHKSLTKDPQDYPDKKSLPHVHVALWINSQGGKKVKAGDTVSYVICQDGSNLAASQ
RAYALEQLQKQPGLNLDTQYYLSQQVHPVVGRICEPIEGIDAVLIATWLGLDPSHFRAQQ
QHQREDEADNFLGAPAQLTDEERYRDCERFTFTCPDCGTENIYDNVFEGAGSTLQPSLKN
CCHIPCRGHPIEHTVQISNKLQLDIRRHIRRYYSGWLLCEDQACRNRTRRLPIAFSRSGP
ICPACLRSTLRPEYSEKALYNQLSFYRYIFDWEYAVNKVLTVEDRTFLRNICKEDKEVYK
TLKDVVDKVLSTSGYSEVNLAKLFQAFTALKY
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtttcgaattctgataaagacatggacggcggagattgtgacacgtccgac
gcatgtggcattgccacttcacgttccaggcgggagnaaaaagagaaagtggggcgcaag
tcagctttagagcaacttaaacgagccaagaagggagagaaggttaaatatgaggtggag
gagttcaccagtgtctatgaggaggtggatgaagagcagtactcgaaaatggtgcgggag
agacaggatgatgattggatcattgatgacgatgggacagggtatgtggaggatggcaga
gaaatctttgatgaagatttggatgatgacgcattggagaagaaccctaaaagtaaacaa
ggtggaaagggaggggattcgaaaaagaatgtaaaaaaagtgtctgtcagcaaacccaac
agcattaaaagcatgttcatgaatagcaatgtgaagaaacctgctgagaaacatgtggat
ttgtctcaagatgatctgctgggtgatattctgcaagacctgcactctgagaaaccagtt
ttgctcactccaccaccaatcattactttgaagaagaagaaaacactgggatcccctatg
aatccattttcagtcaaaccacaggtgccaaaggagtcacctgaagtccaaatgtcaaag
cctagacctgtggtgacgcgggttcctccagctgagccttcacccaggtcttctgctcat
gttcaacctagtaaaccagctcccacacagataaagaagcccaagatagaggagcctgaa
gaagaggcaattgagtttgatgagatggactttgatgagcccatggaggcagagaccatt
gaggaggaaccagtaaaagtgaaggccgaggttgagaccgcatccactgttaaagtggag
cccaagacagagccaaaggatgagatgttaatatccggactgggtggtggcatgggctgg
gagaagattgaggaagggggacccatcgagactcctgtggaagtgcaggtggactccagc
caactcccgctggtggagggacctgacggagatatggttttccgtttctactggttggat
gcttttgaagaccagtacaaccaacctggtgtggtgtacctgtttggaaaagtctggatt
gagtctgctgaagcacatgtcagctgttgtgttgctgtaaaaaacattgagaggacaatg
tatctccttcctagggaacataaagtgaatctggcaactggcgagcagacagacagtcca
gtaggaatgatggatgtgtatcaggagttcaacagtctgtctgagaagttcaaaatcatg
aagttcaagtcaaagccagtgacaaagaactacgcttttgaaatcccagatatcccctca
cagtgcgagtaccttgaagtcaagtactctgctgaacttccttctttgccatctgagctg
aagggctctacattttcccatgtgtttggaaccaacacctccagtttggagcacttcctt
cttaacaggaagatccgagggccttgctggcttgatgtgaagacccctcagttgagcaat
cagcctattagctggtctaaggtggaggctgttgcacagaagactgactttatttcagta
gttaaagacctgccacctcctcccctggtcgtcatgtccataagtctcaagactgtgcaa
aacccaaagacccaccagaatgagatagtttccctcgctgccctcattcatcataaattt
catctggacaaagctccaccacggcctcctttccagacccatttctgtgtggtgagcaag
cccaacgactgtatctttccatatgactttaaagatgcggttaggaaaaagaacggtata
gtggagattgctggtacagagcgtgcacttctaggcttcttcttggccaagatgcacaag
attgatccagatgtcttagtgggccatgacatctttggatttgaccttgaagtgctcctg
cagagaatcaatgtgtgcaaagtgcctcactggtcaaagatcggccgtctaagaagagca
aacatgcccaaactagggggtcgcagtggttttgcagagaagagtgccacttgtggacgc
ctggtttgtgatgttgagatctctgccaaagagctgatccgctgtaagagttatcacctg
actgagctggctgcccagatcctaaagacagaaagggtggtggtcccaccagagaacatc
aggaacttctacggtgattcccctcacttactctactttttggagctcacctggatggat
gccaagctgattctgcaaatcatgtgcgagctgaatgtgttgccgctagcattgcagatc
actaacatcgccggtaacgtcatgtctcgtactctgatgggagggcgctctgaaaggaat
gaattcctactgctccatgctttccatgagaagaacttcatcgttccagacaaacaattc
ttcaagaagccacagcaagatcagggtgaggatgaggatattgaatcagggaagggcaag
tccaccaaaacaaggaagaaggcagcatatgctggaggtctggtgctggaccccaaagtt
ggtttctatgataagtttattctcctgttggacttcaacagtttgtacccctccatcatc
caagagttcaacatctgctttactaccgttgagagaggagcgaccaacgcacagaaaaaa
tcggaggaggatgacgatgagattccagagctgccggatccgagtctggagatgggcatt
cttcccaaagaaattcgaaagctggtggagcgccgacgacaggtcaagcagctgatgaag
caagcagaccttaaccctgacctctgtttgcaatatgatatcaggcagaaggcccttaag
ctgacagctaacagcatgtacggatgccttggcttttccttcagtcgcttttacgccaag
cctttggctgcattggtcactcataaaggaagagagattttgatgcacaccaaagaaatg
gtgcagaggatgaatctggaggtcatatacggggataccgactccatcatgatcaacacc
aacagcaccaatctggaggaggtcttcaaattaggaaacaaggtgaaaagcgaggtgaat
aaactctataagcttctggagattgacatagacggcgtgtttaagtcccttttgctgctg
aagaagaagaaatacgcagcactgatggttgagcctcagggagacggcaagtacaccacc
aaacaagagctcaaaggcctggacattgtgcgcagagactggtgtgacctcgctaaagag
tgtggcaattatgtgattggtcagattctgtcagaccagaatcgtgacaccatcgtagag
aacattcagaaacatctgattgaggttggagagaaggtggccaatggcagtatcccactc
aacatgtttgagatacacaagtcactgacaaaggatcctcaggactaccctgacaagaag
agtctcccgcatgtccatgttgccctctggatcaactcccagggtggaaaaaaggttaaa
gcgggtgacactgtttcttatgtcatctgtcaggacggttcaaacctggcagccagtcag
agggcatatgccctggaacagctacagaaacagccaggacttaacctggacacacagtac
tacctgtcccagcaggtgcaccctgtggtgggccgaatctgtgagcctatcgaaggcatt
gatgcagtgcttattgctacatggcttgggctcgacccaagtcacttccgagctcaacag
cagcatcagcgtgaggacgaagcggacaattttctgggtgctcccgcccagctcactgac
gaagagcgctaccgcgattgcgagaggtttactttcacttgccctgactgtggtaccgaa
aacatctatgacaacgtgtttgaaggggcggggagcaccttacagcccagcttgaagaac
tgctgccatattccctgtcggggccacccaattgagcatactgtccaaattagcaacaaa
ctgcaactggacattcggcgccacatcaggagatactacagtggttggctgctgtgtgag
gatcaggcctgccggaaccgaacccgccggctgccgatcgcattctcgagatccggaccg
atttgtccagcctgtctcagatccacactgagacctgagtactcagagaaagccctttac
aaccagctgagcttctacagatacatctttgactgggaatacgccgtcaacaaggtcctg
acggtagaggatagaacgtttctcaggaatatctgcaaagaagacaaggaagtgtacaaa
acactgaaggatgtagtagacaaagtcctctccaccagcggatactccgaggtcaacctc
gccaaacttttccaggcctttacagccctcaagtattga
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