Labeo rohita (rohu): 127156064
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Entry
127156064 CDS
T09007
Symbol
stub1
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04120
Ubiquitin mediated proteolysis
lroh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127156064 (stub1)
04120 Ubiquitin mediated proteolysis
127156064 (stub1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lroh03110
]
127156064 (stub1)
04131 Membrane trafficking [BR:
lroh04131
]
127156064 (stub1)
04121 Ubiquitin system [BR:
lroh04121
]
127156064 (stub1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127156064 (stub1)
Chaperones and folding catalysts [BR:
lroh03110
]
Other chaperones and cochaperones
Others
127156064 (stub1)
Membrane trafficking [BR:
lroh04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
127156064 (stub1)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
U-box type E3
127156064 (stub1)
Multi subunit type E3
STUB1-CHIC2 complex
127156064 (stub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
CHIP_TPR_N
TPR_1
TPR_2
ANAPC3
TPR_16
TPR_11
TPR_8
TPR_17
TPR_12
TPR_19
TPR_14
TPR_9
ARM_TT21_C
TPR_7
TPR_CcmH_CycH
ARM_TT21_2nd
SRP_TPR_like
NAD_binding_6
Coatomer_E
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
127156064
NCBI-ProteinID:
XP_050954715
LinkDB
All DBs
Position
24:3275454..3282800
Genome browser
AA seq
284 aa
AA seq
DB search
MASSPEKSSSAQELKEQGNRLFLSRKYQEAATCYSKAINRNPSVAVYYTNRALCYVKLQQ
YDKALADCKHALELDSQSVKAHFFLGQCQLELENYEEAIGNLQRAYNLAKEQRLNFGDDI
PSALRIAKKKRWNSIEEKRISQENELHAYLTKLILAEKERELDDRVKQSEDSQNGGEISK
IKSKHDKYLMDMDELFSQVDEKRKKREIPDYLCGKISFELMREPCITPSGITYDRKDIEE
HLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFIQENGWVEDY
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagccccgagaaaagctcctccgcacaggagctcaaggagcagggtaaccgc
ctgttcctcagccgcaagtaccaggaggccgcaacctgttacagcaaagccattaatcgc
aacccgtcagtggccgtgtactacactaacagagcactatgctacgtgaagctgcagcag
tacgacaaggcgctggccgactgtaaacacgccctcgagctcgacagccaatcagtaaag
gcccactttttcctgggccagtgtcagctggaactggagaattatgaagaggccatcggc
aatctacagagagcttataacctggcaaaggaacagcggctgaactttggagacgatatc
ccaagtgctcttcgcattgccaagaagaaacgctggaacagcatagaagagaaacgaatc
agccaagaaaacgagctgcacgcttatctcaccaaactcatcctggccgagaaagagaga
gagctagacgacagagtcaagcaatcagaggacagtcagaacggaggcgagatcagcaag
atcaaatccaaacacgataaatatttgatggacatggatgagcttttctctcaagtagat
gaaaagaggaagaagcgagagatcccagattacctgtgtggaaagatcagttttgagctg
atgagagaaccctgcattactcctagcggcataacctacgatcgcaaggacatcgaggaa
catctacagcgtgttggccattttgacccagtcactcgcagcccgctgacccaagatcag
ctgatccccaatctggccatgaaggaggtgattgatgctttcatccaggagaacggctgg
gtggaggactactga
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