Labeo rohita (rohu): 127156084
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Entry
127156084 CDS
T09007
Symbol
pigm
Name
(RefSeq) GPI mannosyltransferase 1
KO
K05284
GPI mannosyltransferase 1 subunit M [EC:2.4.1.-]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
lroh01100
Metabolic pathways
Module
lroh_M00065
GPI-anchor biosynthesis, core oligosaccharide
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
127156084 (pigm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lroh01003
]
127156084 (pigm)
Glycosyltransferases [BR:
lroh01003
]
GPI-anchor biosynthesis
Core oligosaccharide
127156084 (pigm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mannosyl_trans
PIG-U
GT87
Motif
Other DBs
NCBI-GeneID:
127156084
NCBI-ProteinID:
XP_050954748
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Position
24:35442..40064
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AA seq
398 aa
AA seq
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MDARLCVMFSAAVLIRLVLLCLGVYQDQNLQLKYTDVDYHVFTDASRFIIQGQSPYNRST
FRYTPLLALILTPNVLLSAHFGKLLFVGCDLLSALLLFRLLVLRGASRSSACLCCGLWLF
NPLPIGVSTRGNAESLLAVLVLSTLLCLERRRRTSAALLFGLSVHTKIYPVTYALPVALS
LAGAPSRGRGPIRNLFRCFNKDLLLFAAVSGSVFFSLNATFYCIYGWDFLQESYLYHLTR
RDIRHNFSPYFYMLYVTAEHRWSGALALVCFLPQLLLLSLSSLAFRSDLPFCCFVHTAVF
VSFNKVCTSQYFLWYLCLLPLVLPRLTLSLRRGLGLLLLWFVGQALWLSPAYYLEFEGWN
SFALIWVAGLLFLLINSLILGQIISHYRPAEAQQKKTD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcggctgtgtgtgatgttcagcgccgcggttctgatccggttagtgctgctg
tgcctcggcgtttatcaggatcagaatctgcagctcaagtacactgatgtggattatcac
gtgttcaccgacgcctccagattcatcatacagggtcagagtccgtataacagatccacg
tttcgctacacgcctctgctggcgctgatcctgacgcccaacgtcctcctgagcgctcac
ttcgggaagctgctgttcgtgggctgcgatcttctgtccgctctgctgctcttcaggctg
ctggtcctgcgcggcgcgtcccggagctcggcgtgcctttgctgcggcctgtggctcttc
aacccgctgcccatcggcgtgtccacccgtgggaatgcggagtctctgctggccgtcctg
gttctgtccacgctgctgtgtctggagcgcaggagacggacgtccgccgcgcttctgttc
ggcctgtccgtccacacgaagatctacccggtcacgtacgcgctgcccgtcgcgctttct
ctggccggtgcgccgtcccgcgggcgaggaccgatccggaacctcttccggtgcttcaac
aaggatctgctgctgtttgcagccgtttctggatcggtattcttcagtctgaatgcgacg
ttctactgcatttacggttgggatttcctccaggagtcttatctgtaccacctgacgcgc
agagacatccgtcacaacttctctccgtacttctacatgctgtatgtgacggcggagcat
cgctggagcggcgccctggcgctcgtctgcttcctgccgcagctgctgctgctgtctctg
tcctcgctggccttccgctcggatctgcccttctgctgcttcgtccacacggccgtgttc
gtcagcttcaacaaagtctgcacgtcacagtattttctgtggtatctgtgtttgctgccg
ctggttttgcctcgtttgacgttgagtttgagacgaggcctcgggctgctgctgctgtgg
tttgtgggacaggcgctgtggttgtcgccggcgtattatctggagttcgagggctggaac
agttttgctctcatctgggtcgccgggctgctgtttctcctgataaactctctcatactg
ggacaaataatctcccattacagacccgcagaagcccagcaaaagaaaacagactga
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