Labeo rohita (rohu): 127156109
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Entry
127156109 CDS
T09007
Symbol
tmtopsb
Name
(RefSeq) teleost multiple tissue opsin b
KO
K04256
c-opsin
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lroh01009
]
127156109 (tmtopsb)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lroh04030
]
127156109 (tmtopsb)
Protein phosphatases and associated proteins [BR:
lroh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127156109 (tmtopsb)
G protein-coupled receptors [BR:
lroh04030
]
Rhodopsin family
Vision
Opsin
127156109 (tmtopsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
DUF2975
Motif
Other DBs
NCBI-GeneID:
127156109
NCBI-ProteinID:
XP_050954793
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All DBs
Position
24:complement(10602187..10641822)
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AA seq
400 aa
AA seq
DB search
MIESNVSLSCAWCAGGGDGTSAHLDENHSEHSLSPTGHLVVAVCLGFIGTFGFLNNTLVL
ILFCRYKVLRSPMNCLLVSISVSDLLVCVLGTPFSFAASTQGRWLIGRAGCVWYGFINTF
LGVVSLILLAVLSYERYCTMMGATQADSTNYRKVAMGIAFSWIYSMIWTIPPLFGWSCYG
PEGPGTTCSVNWAARTANNVSYIVCLFIFCLILPFMVIVYSYGRLLQAITQMSRINTAVS
RKREQRVLFMVVTMVVCYLLCWLPYGVMALLATFGRPGLVTPAASIVPSLLAKSSTVINP
IIYIFMNKQFCRCFHALIMCTTPERGSSFKNSSKVTKTLRTVRRANGQNVTFAVASAGHP
AIFAPNSGRQKSSSEGEKPSPAAGQGTNRPVVSLVAYYNG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtccaacgtgagtctgagttgcgcgtggtgcgctggaggtggtgacggaacc
agcgcgcacttggatgagaatcactcagaacacagtctgagtccgaccggacacctggtg
gtcgccgtgtgccttggattcatcggaactttcgggtttctcaacaacacgctcgttctc
atcctgttctgtcgctacaaagtgctgcgctcgcccatgaactgtcttctggtgagcatc
tcagtgagtgatctgctggtgtgcgtcctcggcacgccgttcagcttcgccgccagtacg
cagggccggtggctcatcggacgagcgggatgtgtgtggtacggcttcatcaatacattt
ttgggtgtcgtgtctctaatcttgcttgcggtgctctcttacgagcgctactgcaccatg
atgggggccacacaggcagactctaccaattacagaaaggtggccatgggtattgccttc
tcctggatatattccatgatttggactattccgccactgtttggatggagctgctatggt
ccggaggggcccggcaccacctgcagtgtcaactgggccgccaggacagccaacaacgtg
tcttacatcgtctgtctgtttatcttctgccttattcttccttttatggtgattgtctac
agctatggcagactcctacaggctattacacaaatgagcaggatcaatacggcggtgagt
cgtaagcgggagcagcgtgttctcttcatggtggttacaatggtggtgtgttatctgctg
tgctggctgccctatggggttatggccctgctggccacattcggacgtcccggcctggtc
acaccagcggccagcatcgttccttctctgttagccaagagcagcaccgtcataaacccc
atcatctacatcttcatgaacaaacagttttgcagatgtttccatgcactcatcatgtgc
accaccccagagagaggctccagcttcaaaaactcctccaaagtcaccaaaactctcagg
acagtgcgacgcgccaacggccagaatgtgaccttcgccgtggcctcagctggccatcct
gctatctttgctccaaacagcggcaggcagaaaagttcctcagagggtgagaaaccatct
cctgctgcgggccagggcaccaacagacctgttgtctctcttgtggcctattacaatggt
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