Labeo rohita (rohu): 127156154
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Entry
127156154 CDS
T09007
Symbol
cldn11b
Name
(RefSeq) claudin-11b
KO
K06087
claudin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03272
Virion - Hepatitis viruses
lroh04382
Cornified envelope formation
lroh04514
Cell adhesion molecule (CAM) interaction
lroh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
127156154 (cldn11b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127156154 (cldn11b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127156154 (cldn11b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127156154 (cldn11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127156154 (cldn11b)
04147 Exosome [BR:
lroh04147
]
127156154 (cldn11b)
Cilium and associated proteins [BR:
lroh03037
]
Other cilia and associated proteins
Stereociliary proteins
127156154 (cldn11b)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
127156154 (cldn11b)
Exosomal proteins of colorectal cancer cells
127156154 (cldn11b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF4233
Motif
Other DBs
NCBI-GeneID:
127156154
NCBI-ProteinID:
XP_050954850
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All DBs
Position
24:complement(10457041..10464202)
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AA seq
216 aa
AA seq
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MSHSCRLLCGFLMSCIGWTGIIIATSTNDWVVTCKYGMHTCRKMDELETKGLWTECVIST
ALYHCISLNQILDIPAYIQTSRALMVSASLLGLPALALVLLAMPCVKLSQETEDTKHRRA
VLGGLLILFISLCGMVSTVWFPIGVVHEDGLMSFGFSLYAGWVGSALCFFGSSVMICCSR
SDDPSQNPENRYYYSKHSGVTNSNPPINSHAKSAHV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatagctgtcgtctgctttgcgggtttttaatgagctgcatcggctggactggt
attataatagcgacctcaacaaacgactgggtcgtgacctgtaagtacggcatgcacacc
tgcaggaagatggatgagctggagaccaagggtttgtggactgagtgcgtcatctccact
gctctctatcactgcatctcactcaaccagatccttgatataccagcttacatccagacg
tctcgggctctgatggtgtccgcctctctgctcggtttgcccgctctggcgctcgtactg
ctggcgatgccgtgcgtaaaactgagccaagagaccgaagacaccaaacacagacgcgca
gtactgggaggacttctcatactgttcatatctctgtgtgggatggtgtcgaccgtgtgg
ttccccatcggagttgttcacgaggacggcctgatgtcgttcggattctccttgtatgct
ggctgggtcggttcagccctttgtttttttggcagctcggtgatgatttgttgctcgagg
agcgacgacccaagtcaaaatcctgaaaaccgctactactactcaaaacacagcggagtt
accaattccaacccccctataaacagccatgccaaaagcgcacatgtgtga
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