Labeo rohita (rohu): 127156218
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Entry
127156218 CDS
T09007
Symbol
afg3l1
Name
(RefSeq) AFG3-like protein 2
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127156218 (afg3l1)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lroh03110
]
127156218 (afg3l1)
Peptidases and inhibitors [BR:
lroh01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
127156218 (afg3l1)
Chaperones and folding catalysts [BR:
lroh03110
]
Other chaperones and cochaperones
AAA proteases
127156218 (afg3l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_5
AAA_22
TIP49
AAA_16
RuvB_N
AAA_2
AAA_14
AAA_17
AAA_28
nSTAND3
LonB_AAA-LID
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
127156218
NCBI-ProteinID:
XP_050954922
LinkDB
All DBs
Position
25:complement(2344691..2362171)
Genome browser
AA seq
761 aa
AA seq
DB search
MAGLLSAAAASVRCGSRALFRFNAGAVGRITAAHPRFLALNRFKPVSSIGKHYTFPLLSY
STDAPKDGKGSGPEQRPGGGGRGRKGGRKDWKSRLLQGDVPWDDKDFRYILITLGGVASV
LLYLYLRDPGREITWKDFVHRYLDRGLVDRLEVVNKQFVRVILVPGADSSEGSYVWFNIG
SVDTFERNLEAAHYELGLEPSHRAAVVYTSESDGSFLMSFIPTLLLIGFLLFTLRRGPMG
GGMGGGRGGPFSMSESTAKMLKDNIEVKFKDVAGCEEAKVEIMEFVNFLKNPQQYQDLGA
KIPKGAVLSGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARK
NAPCILFIDEIDAVGRKRGGGNFGGQSEQENTLNQLLVEMDGFNTSTNVVVLAGTNRPDV
LDPALMRPGRFDRQIYLGPPDIKGRASIFKVHLRPLKLDPGLDRDSIARKMAAATPGFTG
ADIANVCNEAALIAARHLNEFINVKHFEQAIDRVIGGLEKKTQVLQPTEKKTVAYHEAGH
AVVGWFLQHADPLLKVSIIPRGKGLGYAQYLPKEQYLYTREQLFDRMCMMLGGRVAEQVF
FDRITTGAHDDLKKVTQSAYAQIVQFGMSEKVGQVSFDLPRQGEMVLEKPYSEATAELID
EEVRDLIDRAFKRTLDLVTEKREQVEMVGKRLLEKEVLDKADMIELLGPRPFEEKSTYEE
FVEGTGSFEEDTSLPEGLKDWNQERREAHEEPPASKEQQAA
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgctctccgcggctgctgcttccgtgcgctgcggatccagagctttattc
cgcttcaacgctggagctgtggggagaatcactgctgctcatccgcggtttttagctctg
aaccgctttaaaccagtatcatccattgggaaacattacacattcccgctcttgtcttat
tccactgatgcacctaaagatggtaaaggaagcggaccagagcagcgacctggaggagga
ggaagaggaaggaaaggagggagaaaagactggaagagtcgattattacagggagatgta
ccgtgggacgataaggattttcgctatattttgatcacactgggaggtgttgcgtctgta
ctgctgtacctctacctcagagatccaggcagagagattacctggaaggattttgtccat
cgatacctggacagaggactggttgaccgtttagaggtggtgaacaaacagtttgtcagg
gtcatcctggtccccggggccgacagctctgaaggaagctacgtgtggtttaacatcggc
agtgtggacacatttgagaggaatctagaagctgctcactatgagctgggtctggagccg
tcccatagagcagcggtcgtctacacctctgagagtgatggatcttttctgatgagtttc
attcccaccctgcttttaattggattcttgcttttcactctgcgccgtgggccaatggga
ggagggatgggcggaggaaggggcgggcccttcagcatgagcgaatcaaccgccaagatg
ttgaaggacaatatcgaagtcaagttcaaggatgtggctggatgcgaagaagccaaggtg
gagatcatggagtttgtcaatttcctcaagaacccacaacaataccaggatttgggtgct
aagatccctaagggtgctgtgctgtcaggtcctccaggaacgggtaaaacactgctggct
aaagctactgccggagaggcaaacgttcccttcattacagtcaacggttcagagtttctg
gagatgtttgttggagttggtccggccagagtgagagacatgtttgctatggcgaggaag
aacgccccgtgcatcctctttattgatgagattgatgctgtggggaggaaaaggggcggg
ggaaattttggtggccagagtgaacaggaaaacacactcaatcaactgttggtggaaatg
gatggtttcaatacaagtacaaatgttgtagttctggctggtacaaacagaccggatgtc
cttgaccctgcactgatgagaccagggaggtttgacagacagatttacttgggacctcct
gatattaagggtcgagcatccatattcaaagtgcatctgcggcccctcaaactggacccc
ggtctggaccgggatagcattgctagaaaaatggcagctgctacacctggatttactggt
gctgatattgcaaatgtctgtaatgaagcagctctcattgctgctcggcatctgaatgaa
ttcatcaatgttaagcactttgagcaggccatcgacagagtcatcggaggtctggagaag
aagactcaagttttacagcccactgagaaaaagactgtagcctatcatgaagcaggacat
gctgtagtgggctggtttctccaacatgctgaccctttgctcaaggtttccataattcca
agagggaaaggcctgggctatgcacagtaccttccaaaagagcagtatttatatactcgg
gagcagctatttgacaggatgtgtatgatgcttggtggacgcgtggctgagcaggtgttt
tttgacaggatcacgactggggctcatgacgaccttaagaaggtcacacagtcggcatat
gctcagattgtgcagtttggcatgagcgagaaagtggggcaggtgtcatttgatctgccc
cggcagggtgagatggtcctggagaagccctacagtgaggctacggcagaactcattgat
gaggaggtcagagatctgatcgaccgggcctttaagagaacactggatctcgtcactgag
aaacgagagcaggtggaaatggttggtaagcgtttgctggaaaaagaagttctagacaaa
gctgatatgatcgagttgcttgggcccaggccatttgaggagaagtccacatatgaggag
tttgtcgagggcactggaagctttgaggaagataccagtcttccagaggggttgaaggac
tggaaccaagagagaagagaagcccacgaagaacctccagcttcaaaggaacaacaagct
gcttga
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