Labeo rohita (rohu): 127156257
Help
Entry
127156257 CDS
T09007
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127156257 (rfwd3)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127156257 (rfwd3)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127156257 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
WD40_CDC20-Fz
Beta-prop_THOC3
zf-C3HC4_2
Beta-prop_WDR5
zf-rbx1
zf-RING_UBOX
EIF3I
WDR55
Beta-prop_WDR3_1st
Beta-prop_EML_2
zf-RING_5
zf-C3HC4_3
WD40
WD40_Prp19
zf-RING_11
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
CFAP43_N
Beta-prop_RIG_2nd
zf-RING_Vps41
Beta-prop_WDR75_1st
zf-C3HC4_4
WD40_2
Beta-prop_WDR36-Utp21_2nd
zf-ANAPC11
YabA
Motif
Other DBs
NCBI-GeneID:
127156257
NCBI-ProteinID:
XP_050954963
LinkDB
All DBs
Position
25:complement(2584113..2595003)
Genome browser
AA seq
665 aa
AA seq
DB search
MEDMEVEVAPASSEASVIVVSESGSSTEEEDVPMQVPGPSDRARLSVRRAVRRRHIIGSN
TQFSTHEERMRRLRELIVDNLAERLSGSQDAQRSVPHVNPRLMDPDPSGRHHAGDVNVPT
SDESSPTGSSVSTESEGTSAAAQPEEPRQESEPVSESADPVSAAASPAGEAEADDGDGEN
CSICFEPWTSAGDHRLAALRCGHLFGFICISRWLTSGGNKCPQCNKPAKRGHIIFLYARK
LKAVDNAEEVRLKSRLELEQGSRRMEQLEVAQCRQQMQLMADENVRLRKEVEELRRWKAQ
AAFSSSQGPSHSSSQRQDSSSGGHYVFSKAVLVSQTGGSRVLSYCEPLGCLLASQPSPQA
TFLPGFGVKKISTATLKPSQYVPIHSKQIRGLAFSRQQDGLLLSAALDNTIKLTSLMTNT
VVQAYNTGRPVWSCSWCHDNNNYIYAGLANGSVLVYDTRDTSTYVQELAPLRSSCPVVSL
SYIPRAASSTFPCGGLIAGTLEGGCFWEHVEGTTYTPHILPLESGNCTDIQVEPDSRHCL
VTYRPGRANPSLRCVLMELSRTPQTDSNQQPVCSCSPVQTFTAGSSCKLLTKNAVFKSPA
GEGATLVCAGDEATNSTMVWDAGTGALLQKMPADLPVLDICPFEVNQSSYLASLTEKLLK
VYKWE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatggaggtggaagtagccccggcatctagtgaggccagtgtcatcgtggtc
tctgaatctggaagcagcacagaggaagaagatgttcccatgcaggttccaggcccgtct
gaccgagccagactttcagtccgtcgggcggtcaggaggagacatataattggttcaaat
acgcagttctccacacatgaagagaggatgcgcagactccgggaactcatcgtagacaat
ttggcagagcggctgagcggctcccaggatgcgcaacgctcagttccacatgtaaatcca
cgactgatggatcctgatcccagcggcaggcaccacgctggtgatgtgaatgtgccgacg
tctgatgaatccagccctacagggtccagtgtttccacagagtctgaagggacaagtgca
gctgctcaaccagaagagccacgacaagagtctgagcctgtctctgagtcggcggatcct
gtttcagctgctgcgagtcctgctggagaggctgaagcagatgatggcgacggagaaaac
tgctccatctgttttgagccctggacctcggcaggtgaccaccgcttggccgctcttcgc
tgcggtcacctcttcggcttcatctgtatttcacgctggttgacgagtggaggaaataaa
tgtccacagtgcaataaaccagccaaacgtggtcatatcatctttctttatgcacggaaa
ctgaaagccgtggacaatgcggaggaagtgcgattgaagagtcgtttagagctggagcag
gggtcgcggagaatggagcagctggaagtcgctcagtgtcgtcaacagatgcaactcatg
gcagatgaaaatgtgcgactgcgcaaagaggtcgaggagttgcggaggtggaaagctcag
gcggcgttcagctcctctcagggaccgtctcactcgtcgtcccaaaggcaggactcgtcc
agcgggggacattatgtcttctctaaagctgtgctggtgtctcaaacaggaggcagtagg
gttttgtcctactgtgagcctctcggctgcctgctggcatcacagccttctccacaagca
acatttctgccaggcttcggtgtgaagaagatcagcactgcgactctcaaacctagtcag
tatgttcccattcattccaaacagatcagaggtctggccttcagccgacaacaggacggc
cttctgctgtctgcagccctcgacaacacaatcaaactcaccagcctgatgacgaacaca
gtagttcaggcctacaacacgggcagacctgtgtggagctgctcctggtgccatgataac
aacaactacatttacgccggtctcgccaacggctctgtgctggtgtacgacacgcgggac
accagcacttacgttcaggagctggcgccgctgcgctccagctgtccagtggtgtctctg
tcctacatcccgcgtgctgcatctagcacgttcccgtgtggcggcctgatcgctggcacg
ctggagggcggctgtttctgggagcacgtggagggaaccacatacacgccccacatcctg
cctctagagtccggcaactgcacagacatacaggtggagccggacagcagacactgtctc
gtcacgtacagaccaggtcgtgcaaacccgtcactgcgttgtgttttaatggagctcagc
cggacgcctcagacagacagcaaccagcagcccgtctgctcctgctctccggtccagacc
ttcaccgctggatcctcctgcaagttgctcacaaagaacgctgtgtttaagagtccggca
ggagagggagccacactagtgtgtgctggagacgaggccacaaactccaccatggtttgg
gatgccggcaccggtgctctgcttcagaagatgcctgcggatctccccgtgctggacatc
tgtccgtttgaggtcaaccagagcagttatctggcctctctgaccgagaaattgctgaag
gtctataaatgggagtga
DBGET
integrated database retrieval system
