Labeo rohita (rohu): 127156291
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Entry
127156291 CDS
T09007
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127156291 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127156291 (lamb4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
dsDNA_bind
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
127156291
NCBI-ProteinID:
XP_050955002
LinkDB
All DBs
Position
25:complement(7500032..7535878)
Genome browser
AA seq
1829 aa
AA seq
DB search
MLIRLKTSAFLLLLIAAPVRLQDECVGNSCYPNLGDLMVGRAAQLTASSTCGLHRPQNYC
ILGHLENERKCFICDSRSPYNLHHNSNSHRIENIITTFQPERKMSWWQSENGVHEVSIQL
DLESMFQFSHLILTFKSFRPAAMLVERSKDFGKTWKVFRYFAEDCANSFPGISEGPADSL
DDLICDSRYSGTEPSTDGEVVLKALDPSFDIHDPYDPTVQELITLTNLRVNLTRLITLGD
TLLTRRRRNPQDKYYYALYEMVVRGSCFCNGHASQCIPVDGTRGDTFSEPGMVHGRCVCQ
HNTAGYNCERCQDFYHDAPWRPAGKTDSDVCRRCNCHGHSEKCHFDLARYLATGGVSGGV
CDDCRNNRVGSQCELCGPYYYQDPQRSVDDPNACIPCECNPDGSVDRGLCDPVSGQCVCK
QNVEGERCDRCKFGFYGFSWDDPNGCQLCRCNFMGTISTGNPCDQTTGTCICEPFAFGPQ
CDQCLPGYWGLGNTVYGCLPCDCDIGGALRTKCSSVDGQCECRPNMVGHKCSEPAPGYFL
APLDFYIYEAEHAAPLVEISPFIQAPPLVYPLEQIPVRPTKLPLCPFVSKPSPVPYKQTE
PPVVKPSPTPYNPHVTLPICEHYYRQRGYDFKISNGRVVVVKREKRRTRRRRQGQRTIPF
EPGSPLQIILRQHAPNQPITWTGPGFVRVQDGAGLRFNVSNIPATLDYYVVVRYEPESTD
DWTAIVNVVSFGSRDRHCPYDPSDKMFTLPGSGRTATLDLPVCLSDGNKYHLDVTFRKNP
SADPQTSSYILIDSLGLIPKVDTLSNFCSQSYLAQLQQYSCIELGAQAGQHILPEVCEKL
IGSMSAFIHNGALSCSCHRVGAYGSSCSKFGGQCQCKPNVIGRCCDSCASLTYGLGPNGC
SQCNCDPSGSTAELCDQTTGQCSCREGVTGRQCDKCYPGYYGFPLCRRCQCNGLADICDP
VTGNCLDCREHSMGLHCERCKDGYVGDPVSGQPCEPCLCPDANGSGRFFAISCNKDPYSG
APYCECLPGHTGLHCDSCAPGYYGDLRLPDSRCEECCCNNNIDPRDGEACDAVTGECLRC
LHNTEGPRCQSCKRGYYGNAFAQDCKECSCDRRGTDDTKCPAGSPCFCDQETGQCPCRTG
VKGTLCNECEDGYWNLDGESGCQLCNCDPEHALNYICDKITGQCLCQPEYGGRKCDECGP
NHFGNPDIQCMSCDCNLEGTIYPACDPYTGECLCKPGVTGLFCDDCAPGHETNFPACEPC
HDCYHLWQKIVSDVRLAIERTETMMPCPEDDRPISELQHLKTLLEKLQSLANLTAKDELE
KLKELLARIRNETETIDPNIIIIDPTVLLNTDIDNIHLEFNRLLKNLREKTNEIPVTDSK
AINDILNKIKKLYDEFTDSEKKVEAAKKVQEASRKTRENATLELAKCRIGEMDKLERKVK
ALSVANLNEKVCGAPGDAECEKAKCGGASCGKCGGPACTGSLPISLEAFKLADMTEKNIT
DLRNKLKEADAKLMSTSKMTNSIKDQAEDLMNKMNQTKTKYEKEKIDTKNLIEKLKNYLR
DEMVRPEDIEKLANAVLSIQLPKSPDEIKDMIEGIKRILANITDFEDDLEHLEKQARIAE
GMKERAKEILNRTKAINVSEIEKALNDTAKLNDKIFNYLDEAGENNEIIRENINETEPKL
KNIEDSLNTTRAKKLLDEIKALKDKTEMNRAQGKEAKDAANAALDSAKDAKKDLEELKEQ
FEKLKRNSTNQNLNEEANERLKNITMEAETLAKNVEDKMKKIEDLEKMILDAAKRKEERM
RDLEALQKEADDLRNFIVDKVDKYNLCST
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgctgatccgattgaagacatcagcattcctgctcctcttgatagctgctccagtccgc
cttcaggacgaatgtgtggggaattcatgttatcctaacctcggtgacctcatggtgggt
cgtgccgcccagctcacggcttcctccacctgtggactgcacagaccacaaaactattgc
atcctgggacacctagagaatgagcgcaagtgcttcatctgtgactccaggagcccctac
aatctccaccataattctaacagccaccgcattgagaacatcatcaccaccttccaacct
gaacgcaagatgagttggtggcagtcggagaatggtgtgcatgaagtcagcattcagttg
gatctggaatcaatgtttcagtttagccatctgatattgacgttcaagagtttccggcct
gctgccatgttggttgagaggtcaaaagacttcgggaaaacctggaaggtttttcgttac
tttgcggaggactgcgccaactcattccccggtatctctgaggggccagcagatagtctt
gatgaccttatctgcgacagtcgctactctgggacagagccgtccaccgatggagaggtg
gtgttgaaagccctggatcccagttttgacatccatgatccatacgaccctactgtacaa
gagttgatcaccctgacgaacctgcgagtaaacctcacccgtttgatcacgctgggcgat
acgttgctcacgcgacggaggaggaacccacaggataaatactattatgccctctatgag
atggtggttcgagggagctgtttctgcaatggccatgccagtcagtgcattcctgtggac
ggcacacgtggagataccttcagtgagcctggcatggtgcatggtagatgtgtttgccaa
cacaacaccgcagggtacaactgtgagcgctgtcaagacttctaccatgatgccccctgg
aggccagctggaaaaacagactcggatgtttgcagaaggtgtaactgtcatggtcattcg
gagaagtgtcactttgacttagcacgctatctggccactggtggggttagtggtggtgtg
tgtgatgactgcaggaacaaccgtgttggatcccagtgtgagctgtgtgggccatattac
taccaggaccctcaacgctctgtggacgaccccaatgcttgtataccttgcgaatgcaat
cctgatggctcagtggaccgtggtctgtgcgatccagtgtctggccagtgcgtatgtaaa
caaaacgttgaaggagagcgttgtgaccgctgcaagtttgggttctacgggttcagctgg
gatgatcctaatggctgtcagttgtgtaggtgtaattttatgggaactataagcactggc
aacccttgtgatcagacaacgggaacatgcatctgcgagccatttgcttttggcccacag
tgtgaccagtgtctgccaggttactggggtctgggaaacacagtctatggctgcttaccc
tgcgactgtgacattggaggcgcattgagaactaaatgttcctcagtggatggccaatgt
gaatgcaggcctaacatggtaggccacaaatgtagtgagccggcccctggatatttcctg
gctccacttgatttctatatctatgaggctgaacatgcagcacctctggtggaaatctct
ccatttatacaagcccctccattggtgtaccccctagaacagatacctgtacgaccaacc
aagctccctctctgtccctttgtttcgaaaccctccccagtaccttataaacaaaccgaa
cccccagtggtgaagccatctccaaccccatacaacccccatgtcacactacccatctgt
gagcactactacagacagaggggttatgacttcaagatcagtaatggcagggttgtggtg
gtcaaacgtgagaaacgaagaactcgaagacgaagacaaggccagaggacaatccccttt
gaaccaggctcacctcttcagatcatcctgcgacagcatgcaccaaatcaacccatcact
tggactggaccgggttttgtgcgagttcaggatggggctggacttaggtttaatgtcagc
aatataccagctactcttgactactatgtagttgtccgctatgaaccagagtccaccgat
gattggacagctatcgtgaatgttgtatcatttggatcaagagatagacattgtccatat
gacccgtctgacaaaatgtttactcttccaggctctggaaggacagccactctggatctt
ccagtatgcctcagtgatggtaataaataccatctggatgtcacttttagaaagaatccc
agtgccgaccctcagaccagctcatacatcttgattgactctctgggcctcattcccaaa
gtggacaccctgtcaaacttctgctcgcagtcatatctagcacagttacagcaatacagc
tgtattgagttgggcgcacaggcaggacagcacatccttcctgaagtatgtgaaaagctt
attggaagtatgtcagctttcattcacaacggtgcactgtcttgcagctgtcatcgtgtt
ggagcgtatggctcatcttgcagtaaattcggtggacagtgtcaatgcaaacccaacgtt
attggccgttgctgtgattcctgtgcttctctgacatatgggcttggacccaatggctgc
tcgcaatgtaactgtgatccgtccggctctaccgctgagctgtgtgaccagacaactggt
cagtgctcatgtcgggaaggagtaactggtcgtcaatgtgataaatgttatcctggttac
tacgggtttcccctgtgcagacgttgccaatgcaacgggttggctgacatctgtgacccc
gtaactggaaactgtttggactgcagggaacactccatgggactccactgtgaaaggtgt
aaggatggttatgttggtgaccctgtctcagggcagccatgtgagccatgcttatgtcca
gatgcgaatggaagtgggcgtttctttgccatttcctgcaataaggatccatactctgga
gctccatactgtgaatgtctgcctggacatacaggcctacactgtgactcctgtgctcct
ggttattatggtgacctaaggttgccagacagccgatgtgaagaatgttgttgcaacaat
aacatcgatcctcgtgatggtgaggcatgcgatgctgtaactggtgaatgtttgcgctgc
ttacacaacacagaggggccgcgctgtcagagctgcaaacgtggatactatggcaatgct
ttcgctcaagactgcaaagagtgctcttgtgaccggaggggcacagatgacacaaagtgt
ccagctggaagtccctgcttctgtgaccaggaaactggccagtgcccgtgtcgcacaggt
gtcaagggaaccctctgtaatgagtgtgaggatggatactggaacctggatggagaatct
gggtgccagctctgtaactgtgacccagaacatgctctcaactacatctgtgacaagatc
acaggccagtgtttgtgccagccagagtatggaggcagaaaatgtgacgagtgtgggccg
aatcactttggaaaccccgatatacagtgcatgtcttgtgactgtaacttggagggcacc
atttatccagcttgtgacccttacactggtgagtgtttgtgtaagccaggggtgacgggc
cttttctgtgacgactgcgccccgggccatgaaacaaactttcctgcctgtgaaccctgc
catgactgctaccacctctggcagaaaattgtctcagatgttagactagctattgagagg
acagaaactatgatgccgtgtcctgaagacgatcggcctatatcagaactacaacactta
aagactttgttggagaagctgcagagtctggctaacttgaccgccaaggatgagcttgag
aagctaaaggagctcttggcacgtattaggaatgaaacggagactattgacccaaacata
atcattattgatccaactgtactgctcaacactgacatcgacaatatccatcttgagttc
aatagactgttgaagaatctcagggagaagacaaacgagattccagtgacagactcaaaa
gctattaatgatattttgaataagatcaaaaagctctatgacgaattcactgacagtgag
aagaaagtggaagcagctaaaaaggtccaagaagcctccaggaagacaagagagaatgct
acactggaacttgcaaagtgtcgcataggagaaatggataagctggagaggaaagtaaaa
gctctgagtgttgccaacctcaacgaaaaggtctgtggggctccaggcgatgcagaatgt
gagaaggcaaaatgtggtggagcttcatgtgggaaatgtggggggccggcctgtacaggg
agtttacccatcagcctcgaagccttcaaactggcagatatgactgagaagaacataact
gatctgcgcaataaactcaaggaagctgatgctaagctcatgagcacctcaaaaatgact
aattcaatcaaagatcaagctgaggacctgatgaataaaatgaaccagactaagaccaaa
tatgagaaggaaaagattgacaccaagaacctcatagagaagctcaagaactacttgaga
gatgagatggtgaggccagaggacattgagaaactggccaatgctgtgttgtccattcag
ctgcccaagtcccctgatgagatcaaggacatgatagagggcatcaagaggatcctggca
aacatcaccgacttcgaggatgatctagagcacttggaaaaacaagccagaattgctgaa
ggcatgaaggagagggccaaagaaatcttgaacagaaccaaggctatcaatgtgagcgag
atagagaaagcactcaatgatacagcaaagctcaatgacaagatattcaattatctggac
gaggccggagaaaacaatgagattatcagggagaacattaatgagactgaacctaaacta
aaaaatatagaggatagtttgaatacaactcgtgccaaaaagttactggatgaaatcaag
gccttgaaggataagacggagatgaacagagctcaggggaaggaggccaaagatgctgcc
aatgcagcgctcgacagtgccaaagacgccaaaaaggatcttgaggaactgaaagagcag
tttgaaaaattaaaacggaatagcacaaaccagaaccttaatgaagaggctaacgaacgt
ctgaagaacatcacaatggaggcagaaacgctggctaaaaatgtggaagataaaatgaag
aaaattgaagacttggagaaaatgattctggatgcagctaaaagaaaagaagaaaggatg
agagatttggaggcactccagaaggaggcagatgacttgaggaactttattgttgacaaa
gtggataaatacaatctgtgctccacttaa
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integrated database retrieval system