KEGG   Labeo rohita (rohu): 127156291
Entry
127156291         CDS       T09007                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
  KO
K06245  laminin, beta 4
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04510  Focal adhesion
lroh04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127156291 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127156291 (lamb4)
SSDB
Motif
Pfam: Laminin_EGF Laminin_N LAMININ_IV_B dsDNA_bind F5_F8_type_C BNR_6
Other DBs
NCBI-GeneID: 127156291
NCBI-ProteinID: XP_050955002
LinkDB
Position
25:complement(7500032..7535878)
AA seq 1829 aa
MLIRLKTSAFLLLLIAAPVRLQDECVGNSCYPNLGDLMVGRAAQLTASSTCGLHRPQNYC
ILGHLENERKCFICDSRSPYNLHHNSNSHRIENIITTFQPERKMSWWQSENGVHEVSIQL
DLESMFQFSHLILTFKSFRPAAMLVERSKDFGKTWKVFRYFAEDCANSFPGISEGPADSL
DDLICDSRYSGTEPSTDGEVVLKALDPSFDIHDPYDPTVQELITLTNLRVNLTRLITLGD
TLLTRRRRNPQDKYYYALYEMVVRGSCFCNGHASQCIPVDGTRGDTFSEPGMVHGRCVCQ
HNTAGYNCERCQDFYHDAPWRPAGKTDSDVCRRCNCHGHSEKCHFDLARYLATGGVSGGV
CDDCRNNRVGSQCELCGPYYYQDPQRSVDDPNACIPCECNPDGSVDRGLCDPVSGQCVCK
QNVEGERCDRCKFGFYGFSWDDPNGCQLCRCNFMGTISTGNPCDQTTGTCICEPFAFGPQ
CDQCLPGYWGLGNTVYGCLPCDCDIGGALRTKCSSVDGQCECRPNMVGHKCSEPAPGYFL
APLDFYIYEAEHAAPLVEISPFIQAPPLVYPLEQIPVRPTKLPLCPFVSKPSPVPYKQTE
PPVVKPSPTPYNPHVTLPICEHYYRQRGYDFKISNGRVVVVKREKRRTRRRRQGQRTIPF
EPGSPLQIILRQHAPNQPITWTGPGFVRVQDGAGLRFNVSNIPATLDYYVVVRYEPESTD
DWTAIVNVVSFGSRDRHCPYDPSDKMFTLPGSGRTATLDLPVCLSDGNKYHLDVTFRKNP
SADPQTSSYILIDSLGLIPKVDTLSNFCSQSYLAQLQQYSCIELGAQAGQHILPEVCEKL
IGSMSAFIHNGALSCSCHRVGAYGSSCSKFGGQCQCKPNVIGRCCDSCASLTYGLGPNGC
SQCNCDPSGSTAELCDQTTGQCSCREGVTGRQCDKCYPGYYGFPLCRRCQCNGLADICDP
VTGNCLDCREHSMGLHCERCKDGYVGDPVSGQPCEPCLCPDANGSGRFFAISCNKDPYSG
APYCECLPGHTGLHCDSCAPGYYGDLRLPDSRCEECCCNNNIDPRDGEACDAVTGECLRC
LHNTEGPRCQSCKRGYYGNAFAQDCKECSCDRRGTDDTKCPAGSPCFCDQETGQCPCRTG
VKGTLCNECEDGYWNLDGESGCQLCNCDPEHALNYICDKITGQCLCQPEYGGRKCDECGP
NHFGNPDIQCMSCDCNLEGTIYPACDPYTGECLCKPGVTGLFCDDCAPGHETNFPACEPC
HDCYHLWQKIVSDVRLAIERTETMMPCPEDDRPISELQHLKTLLEKLQSLANLTAKDELE
KLKELLARIRNETETIDPNIIIIDPTVLLNTDIDNIHLEFNRLLKNLREKTNEIPVTDSK
AINDILNKIKKLYDEFTDSEKKVEAAKKVQEASRKTRENATLELAKCRIGEMDKLERKVK
ALSVANLNEKVCGAPGDAECEKAKCGGASCGKCGGPACTGSLPISLEAFKLADMTEKNIT
DLRNKLKEADAKLMSTSKMTNSIKDQAEDLMNKMNQTKTKYEKEKIDTKNLIEKLKNYLR
DEMVRPEDIEKLANAVLSIQLPKSPDEIKDMIEGIKRILANITDFEDDLEHLEKQARIAE
GMKERAKEILNRTKAINVSEIEKALNDTAKLNDKIFNYLDEAGENNEIIRENINETEPKL
KNIEDSLNTTRAKKLLDEIKALKDKTEMNRAQGKEAKDAANAALDSAKDAKKDLEELKEQ
FEKLKRNSTNQNLNEEANERLKNITMEAETLAKNVEDKMKKIEDLEKMILDAAKRKEERM
RDLEALQKEADDLRNFIVDKVDKYNLCST
NT seq 5490 nt   +upstreamnt  +downstreamnt
atgctgatccgattgaagacatcagcattcctgctcctcttgatagctgctccagtccgc
cttcaggacgaatgtgtggggaattcatgttatcctaacctcggtgacctcatggtgggt
cgtgccgcccagctcacggcttcctccacctgtggactgcacagaccacaaaactattgc
atcctgggacacctagagaatgagcgcaagtgcttcatctgtgactccaggagcccctac
aatctccaccataattctaacagccaccgcattgagaacatcatcaccaccttccaacct
gaacgcaagatgagttggtggcagtcggagaatggtgtgcatgaagtcagcattcagttg
gatctggaatcaatgtttcagtttagccatctgatattgacgttcaagagtttccggcct
gctgccatgttggttgagaggtcaaaagacttcgggaaaacctggaaggtttttcgttac
tttgcggaggactgcgccaactcattccccggtatctctgaggggccagcagatagtctt
gatgaccttatctgcgacagtcgctactctgggacagagccgtccaccgatggagaggtg
gtgttgaaagccctggatcccagttttgacatccatgatccatacgaccctactgtacaa
gagttgatcaccctgacgaacctgcgagtaaacctcacccgtttgatcacgctgggcgat
acgttgctcacgcgacggaggaggaacccacaggataaatactattatgccctctatgag
atggtggttcgagggagctgtttctgcaatggccatgccagtcagtgcattcctgtggac
ggcacacgtggagataccttcagtgagcctggcatggtgcatggtagatgtgtttgccaa
cacaacaccgcagggtacaactgtgagcgctgtcaagacttctaccatgatgccccctgg
aggccagctggaaaaacagactcggatgtttgcagaaggtgtaactgtcatggtcattcg
gagaagtgtcactttgacttagcacgctatctggccactggtggggttagtggtggtgtg
tgtgatgactgcaggaacaaccgtgttggatcccagtgtgagctgtgtgggccatattac
taccaggaccctcaacgctctgtggacgaccccaatgcttgtataccttgcgaatgcaat
cctgatggctcagtggaccgtggtctgtgcgatccagtgtctggccagtgcgtatgtaaa
caaaacgttgaaggagagcgttgtgaccgctgcaagtttgggttctacgggttcagctgg
gatgatcctaatggctgtcagttgtgtaggtgtaattttatgggaactataagcactggc
aacccttgtgatcagacaacgggaacatgcatctgcgagccatttgcttttggcccacag
tgtgaccagtgtctgccaggttactggggtctgggaaacacagtctatggctgcttaccc
tgcgactgtgacattggaggcgcattgagaactaaatgttcctcagtggatggccaatgt
gaatgcaggcctaacatggtaggccacaaatgtagtgagccggcccctggatatttcctg
gctccacttgatttctatatctatgaggctgaacatgcagcacctctggtggaaatctct
ccatttatacaagcccctccattggtgtaccccctagaacagatacctgtacgaccaacc
aagctccctctctgtccctttgtttcgaaaccctccccagtaccttataaacaaaccgaa
cccccagtggtgaagccatctccaaccccatacaacccccatgtcacactacccatctgt
gagcactactacagacagaggggttatgacttcaagatcagtaatggcagggttgtggtg
gtcaaacgtgagaaacgaagaactcgaagacgaagacaaggccagaggacaatccccttt
gaaccaggctcacctcttcagatcatcctgcgacagcatgcaccaaatcaacccatcact
tggactggaccgggttttgtgcgagttcaggatggggctggacttaggtttaatgtcagc
aatataccagctactcttgactactatgtagttgtccgctatgaaccagagtccaccgat
gattggacagctatcgtgaatgttgtatcatttggatcaagagatagacattgtccatat
gacccgtctgacaaaatgtttactcttccaggctctggaaggacagccactctggatctt
ccagtatgcctcagtgatggtaataaataccatctggatgtcacttttagaaagaatccc
agtgccgaccctcagaccagctcatacatcttgattgactctctgggcctcattcccaaa
gtggacaccctgtcaaacttctgctcgcagtcatatctagcacagttacagcaatacagc
tgtattgagttgggcgcacaggcaggacagcacatccttcctgaagtatgtgaaaagctt
attggaagtatgtcagctttcattcacaacggtgcactgtcttgcagctgtcatcgtgtt
ggagcgtatggctcatcttgcagtaaattcggtggacagtgtcaatgcaaacccaacgtt
attggccgttgctgtgattcctgtgcttctctgacatatgggcttggacccaatggctgc
tcgcaatgtaactgtgatccgtccggctctaccgctgagctgtgtgaccagacaactggt
cagtgctcatgtcgggaaggagtaactggtcgtcaatgtgataaatgttatcctggttac
tacgggtttcccctgtgcagacgttgccaatgcaacgggttggctgacatctgtgacccc
gtaactggaaactgtttggactgcagggaacactccatgggactccactgtgaaaggtgt
aaggatggttatgttggtgaccctgtctcagggcagccatgtgagccatgcttatgtcca
gatgcgaatggaagtgggcgtttctttgccatttcctgcaataaggatccatactctgga
gctccatactgtgaatgtctgcctggacatacaggcctacactgtgactcctgtgctcct
ggttattatggtgacctaaggttgccagacagccgatgtgaagaatgttgttgcaacaat
aacatcgatcctcgtgatggtgaggcatgcgatgctgtaactggtgaatgtttgcgctgc
ttacacaacacagaggggccgcgctgtcagagctgcaaacgtggatactatggcaatgct
ttcgctcaagactgcaaagagtgctcttgtgaccggaggggcacagatgacacaaagtgt
ccagctggaagtccctgcttctgtgaccaggaaactggccagtgcccgtgtcgcacaggt
gtcaagggaaccctctgtaatgagtgtgaggatggatactggaacctggatggagaatct
gggtgccagctctgtaactgtgacccagaacatgctctcaactacatctgtgacaagatc
acaggccagtgtttgtgccagccagagtatggaggcagaaaatgtgacgagtgtgggccg
aatcactttggaaaccccgatatacagtgcatgtcttgtgactgtaacttggagggcacc
atttatccagcttgtgacccttacactggtgagtgtttgtgtaagccaggggtgacgggc
cttttctgtgacgactgcgccccgggccatgaaacaaactttcctgcctgtgaaccctgc
catgactgctaccacctctggcagaaaattgtctcagatgttagactagctattgagagg
acagaaactatgatgccgtgtcctgaagacgatcggcctatatcagaactacaacactta
aagactttgttggagaagctgcagagtctggctaacttgaccgccaaggatgagcttgag
aagctaaaggagctcttggcacgtattaggaatgaaacggagactattgacccaaacata
atcattattgatccaactgtactgctcaacactgacatcgacaatatccatcttgagttc
aatagactgttgaagaatctcagggagaagacaaacgagattccagtgacagactcaaaa
gctattaatgatattttgaataagatcaaaaagctctatgacgaattcactgacagtgag
aagaaagtggaagcagctaaaaaggtccaagaagcctccaggaagacaagagagaatgct
acactggaacttgcaaagtgtcgcataggagaaatggataagctggagaggaaagtaaaa
gctctgagtgttgccaacctcaacgaaaaggtctgtggggctccaggcgatgcagaatgt
gagaaggcaaaatgtggtggagcttcatgtgggaaatgtggggggccggcctgtacaggg
agtttacccatcagcctcgaagccttcaaactggcagatatgactgagaagaacataact
gatctgcgcaataaactcaaggaagctgatgctaagctcatgagcacctcaaaaatgact
aattcaatcaaagatcaagctgaggacctgatgaataaaatgaaccagactaagaccaaa
tatgagaaggaaaagattgacaccaagaacctcatagagaagctcaagaactacttgaga
gatgagatggtgaggccagaggacattgagaaactggccaatgctgtgttgtccattcag
ctgcccaagtcccctgatgagatcaaggacatgatagagggcatcaagaggatcctggca
aacatcaccgacttcgaggatgatctagagcacttggaaaaacaagccagaattgctgaa
ggcatgaaggagagggccaaagaaatcttgaacagaaccaaggctatcaatgtgagcgag
atagagaaagcactcaatgatacagcaaagctcaatgacaagatattcaattatctggac
gaggccggagaaaacaatgagattatcagggagaacattaatgagactgaacctaaacta
aaaaatatagaggatagtttgaatacaactcgtgccaaaaagttactggatgaaatcaag
gccttgaaggataagacggagatgaacagagctcaggggaaggaggccaaagatgctgcc
aatgcagcgctcgacagtgccaaagacgccaaaaaggatcttgaggaactgaaagagcag
tttgaaaaattaaaacggaatagcacaaaccagaaccttaatgaagaggctaacgaacgt
ctgaagaacatcacaatggaggcagaaacgctggctaaaaatgtggaagataaaatgaag
aaaattgaagacttggagaaaatgattctggatgcagctaaaagaaaagaagaaaggatg
agagatttggaggcactccagaaggaggcagatgacttgaggaactttattgttgacaaa
gtggataaatacaatctgtgctccacttaa

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