Labeo rohita (rohu): 127156337
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Entry
127156337 CDS
T09007
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127156337 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127156337 (myo5c)
04131 Membrane trafficking [BR:
lroh04131
]
127156337 (myo5c)
03029 Mitochondrial biogenesis [BR:
lroh03029
]
127156337 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127156337 (myo5c)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127156337 (myo5c)
mRNA cycle factors
P-body specific factors
127156337 (myo5c)
Membrane trafficking [BR:
lroh04131
]
Others
Actin-binding proteins
Myosins
127156337 (myo5c)
Mitochondrial biogenesis [BR:
lroh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127156337 (myo5c)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
127156337 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Csm1_N
AAA_22
nSTAND3
AAA_16
AvrM_N
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
127156337
NCBI-ProteinID:
XP_050955059
LinkDB
All DBs
Position
25:complement(24500805..24534380)
Genome browser
AA seq
1745 aa
AA seq
DB search
MALSELYTKYNRVWIPDAEHVWKSAEILTDFKPGDTELEIQLEDGTELKYPLEGGDKLPP
LRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIILVAVNPYKQLPIYGD
AVIHAYSGQNMGDLDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFA
VVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDKKYQIIGANMRT
YLLEKSRVVFQSENERNYHIFYQLCACANQPEFKNLRLLGADKFNYTCLSGETEIEGVDD
WADMAETRRTFGLLGLKDSFQADVFKVLAAILHLGNVKIKENGSEKSSIGSRDPHLSIFC
ELMGVSMDNMCRWLCHRRIVLSAETVVKPQPKERAINARDALAKHIYAHLFDWVIQKINQ
ALMVPGKQHSFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDKNWLQKLYNFLGSNPLFEKPR
MSNDSFMIQHFADKVEYQCKGFLEKNRDTLYEELVDIMRTSQFAVLADFFKEEERNSGHK
NIKVTPAHPRVKASNKQLRTTVGDKFRSSLYLLMETLNATTPHYVRCIKPNEEKLAFEYD
SKRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSQSELKLGEKKQTCKTVLQ
RLIPDSNQYKFGRTKIFFRAGQVAYLEKLRLDYLRAACVTIQKHVRGWRQRRRFLHMRQA
AITIQQYVRGKKQIRCTITALALKQGWAAMVIQRHCRGYLVRRIYQLVLSATVTIQAYTR
GWMARKHYRKMLAEHKALVLQKYARAWLVRRRFQTMRRLVINVQLSYRVQQLRKKIEEQN
KENLGLMERLAILSNARAQGLEKIQALEAELGKLTNEMSALEERERTNSEQASQKITLLQ
SDKEKLTEAKKALEQKLKDTSLQLQDQFEDIKRKLMEDLERQERLRKVAEHNSELQKEDS
DKEIVVLKEESRRLREERIRLQTQVEEDKKTNAELQEQVLQLTKHVKVIPDLRKEINSLQ
MQRVEADKTMRAQKLQARAKMSLITRQLLGEAKEENLIQRLNEEALENDDGADLLTAFDA
MEKAAKVVETQLREQKDTYESQVEALVFKNEHLNKENEQLQALFQEKNDVNQSIGQEVAR
LTAENMVIPELKQQVSELSRHKQEIETQLQEQSAEMSAKIKELTNELQLAVEEEQSQRRH
LEEKITESESRREEMERQMADLQEENEQLQKAQLSESEAKNKLRQETSRLTAENMDFEEQ
LDMKDRLIKRLQDQIKALQTHAEANQKEAPAVPKEYLGMLEYKKEDESRLIRTLVLELKP
RSVGVLIIPGLAAHLLFMCVRHADYLNDGNKLKSLMNGIISGIKEVTTNHQESFETLSFW
LSNTYHFLNCLKQYSGDEEFMKHNTPRQNKNCLRNFDLSEHRQILSDLAINIYHQFISVM
EDALFPMIIPAMLEHESLQGISSMKPTGFRKRSSSMYEDDGDQSRSEPFSVTSILQQLDA
FHSSMAQHGMESQLQGQVIRQLFFLIGSTSVNSILLRKDLCSCRKGMQIRCNISYLEEWL
REKDLQSSCAMETLGPLSQVAWILQVNKTTDEDAAQIKQRCSELSPVQIVKILNSYTPID
DFEKRVAPSFVRKVQALLQEREGSSQLMMDSQYRFQVTFPFCSSPQALELLQVPSSLHLG
FVTRI
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtcggagttgtatacaaagtataacagggtgtggatccctgacgcggaacat
gtttggaaatctgcggagattctgacagatttcaagcctggtgatactgagctggaaatt
cagctggaggatgggacggagctgaagtatcctctggaagggggtgacaagttgccaccc
cttcgtaacccagacatcctggtgggtgagaatgacctcacggccctcagttaccttcat
gaaccggccgtgctccacaacctcaaagtcagatttgttgagtccaaaatcatctacaca
tattgtggaattatcctcgtggcagtcaacccatacaagcagcttcccatctatggagat
gcagtcatccatgcttactctggtcaaaacatgggcgacctggaccctcatatatttgct
gtggctgaagaggcctacaaacaaatggccaggaataacaagaatcagtccatcattgtg
agcggtgagtctggagctggaaaaactgtatctgctcgctatgctatgaggtactttgct
gtggttagcaaatctggcagcaaaactcgggtggaagacaaagttttggcgtccaaccca
atcactgaggccattggaaatgcaaaaacaaccagaaatgacaacagtagtcgattcggg
aagtacactgagatcagctttgacaaaaaataccaaatcattggtgctaacatgaggaca
taccttctggaaaagtcaagggtggtttttcagtcggagaatgagagaaattatcacatc
ttctaccagttgtgtgcatgtgcaaatcagccggagtttaaaaacttaagactgttgggc
gcagacaagtttaactacacttgtttgagtggtgagacagagatcgagggtgtggacgac
tgggctgacatggcagaaacacgcagaacctttggtctactaggtcttaaggacagtttt
caagctgacgtgtttaaggtgctcgctgcaattctgcatctgggaaatgtaaaaatcaag
gaaaatggctctgagaaatcatccattggttccagagaccctcacttatccatattctgt
gagctgatgggtgtcagcatggacaacatgtgccgctggctgtgtcacagacggatagtc
ctgtcagcagagacagtggtgaaaccacagcccaaggaacgtgccatcaacgcccgtgat
gcccttgccaaacacatctacgcccatcttttcgactgggtgatccagaagatcaaccag
gcacttatggtgcctgggaagcagcattcatttattggggtgttggatatttatggattt
gagacctttgacattaacagtttcgagcagttctgcatcaactatgccaatgagaagctg
cagcagcagttcaacctgcacgtatttaaactagagcaggaggagtacatgaaagaagac
attccatggacgctgatcgatttttacgacaatcagcccgttattgatctcatcgaggcc
aagatgggcattctggaccttttggatgaggagtgtctgttcccacagggcactgataaa
aactggctgcaaaagctgtacaattttctaggctcaaatcctctgtttgagaaaccacga
atgtctaatgactcttttatgatccagcattttgctgataaggtagaataccagtgcaaa
ggttttttggagaagaacagagacacgctttatgaagagctggtggacatcatgcgtact
agtcagtttgctgtcttggcagatttttttaaagaggaggaacgaaattctgggcataaa
aatattaaggttacaccggcacatcccagagtcaaagcttcaaacaagcagctgagaacc
actgtaggagacaagtttcgaagttccttgtatctgttaatggagacgctgaatgctact
acacctcattacgtgcgctgtattaaacccaatgaggagaaactggcttttgaatatgac
tcaaagcgtgtggtgcagcagctgagggcctgtggtgtgctggagaccatccgtatcagt
gcacagagttacccatccaggtggacgtatatagagttttacagccgttacagtatcttg
atgagccagtcggagctgaagctgggagagaagaaacagacgtgcaagacggttttgcag
agactcattcctgattccaaccagtacaagttcggtcggactaagatcttcttccgggcg
ggacaggtggcgtacctggagaagctgcgtttggattatcttcgtgcagcttgtgtgacc
atccagaagcacgtgaggggctggagacagagacgcaggttcctgcacatgagacaagct
gccatcactatccaacagtacgtgcgtggaaagaaacagatcaggtgcaccataacagct
ctggcgctgaagcagggctgggccgctatggtgatccagagacactgtcgtgggtatctg
gtgcggaggatttaccagctcgtcctgagtgccacagtcaccatacaagcgtacaccaga
ggatggatggcccgcaagcactacagaaagatgttggcagagcacaaggctctggttctg
cagaaatacgcccgagcttggctggtgcgtcggcgctttcaaaccatgcgacggctggtc
atcaacgtgcagctgtcgtaccgtgtccagcagctgcgcaagaaaatagaagagcagaat
aaagagaacctaggactcatggaaagactcgccattttgtctaatgcacgtgctcaagga
ctagaaaagattcaggctctggaggcggagcttggaaagctaaccaatgagatgtcagct
ttagaggagagggagagaacaaattctgaacaggccagtcagaaaatcactctgcttcag
agtgacaaagagaaacttactgaggcgaaaaaagctttggagcagaaactgaaagacacg
agtctgcagttgcaagatcaatttgaggatataaagagaaaactgatggaagatttagaa
agacaggagagactcagaaaggtggcggagcacaacagtgaactccagaaggaagactcg
gataaagagatcgtagtactgaaagaggaaagccgtagactgagagaggagcgaataagg
ctgcaaacgcaagtggaggaggacaagaagaccaatgcagaactgcaggaacaagtgctg
cagctcaccaagcacgtcaaggtcataccagatttacggaaagaaatcaacagcctacag
atgcagcgagtcgaagctgataaaaccatgagagctcagaaactacaagccagagctaag
atgagtttaatcacaaggcagctgctcggtgaagctaaagaggaaaatctcatccagaga
ctaaatgaagaagccttagagaatgatgatggagctgatcttctcactgcgtttgatgcc
atggaaaaagctgctaaggtggtagaaactcagctgcgggagcagaaagacacttatgag
agtcaggtagaagctctggtcttcaaaaacgaacatctgaacaaagagaacgaacagctt
caagctctctttcaggagaagaatgacgtcaaccaaagcatcggacaggaagtggctcgc
ctcactgccgagaacatggtgattccagaactgaagcagcaggtgtcagaattgagccgt
cacaaacaagagattgagacccagttgcaagagcagagcgctgagatgagcgccaaaata
aaggagttaacaaatgagcttcagcttgctgtcgaagaggagcaatcgcagcgcaggcac
ctggaggaaaagattacagagagcgagagtagaagagaagagatggaaagacagatggct
gacctccaggaggagaacgagcagctacagaaagcccagctctcggagagcgaagccaag
aacaaactcagacaggagacatcacgcctcacagcggagaatatggacttcgaggagcag
ctagacatgaaggacagactgataaaacgcctccaagaccaaatcaaagctcttcaaact
catgcggaagccaatcagaaagaggcaccggccgtgcccaaagagtacttgggcatgttg
gagtacaagaaggaggatgaaagcaggctgatccggacgcttgtgttggagctgaaacct
cgcagtgtaggtgtgctaattatccccggtctggctgcacatctcctcttcatgtgtgtg
agacacgctgattacctcaacgatggaaacaagctcaagtctctaatgaacggtatcatc
tcaggcatcaaagaggtcaccacgaaccaccaggagagttttgaaactctgtccttctgg
ctctcaaacacatatcacttcctcaactgtctcaaacagtacagcggggatgaggagttc
atgaagcacaacactcctcgtcagaacaaaaactgtctgagaaacttcgacctgtcagag
caccggcagattctcagcgacctcgccatcaacatctaccatcagtttatcagcgtgatg
gaggacgcgctctttcccatgatcatccctgcaatgttggagcacgagagtctccaggga
atctccagcatgaagcccaccggtttccgcaagcgctcgagcagcatgtatgaggatgac
ggagaccaaagcaggtcggagccgttcagcgtgacctccatcctccagcagctcgacgcg
ttccacagcagcatggcgcagcatggcatggagtcgcagctgcagggtcaggtcataaga
cagctgtttttccttatcggatccacatctgtgaacagcattttgcttcgcaaggacctg
tgctcctgccgcaagggcatgcagatcaggtgcaacatcagttatctagaggagtggctg
cgtgagaaggatctgcaaagcagctgtgccatggaaacactagggccgctctctcaggtc
gcatggattctacaagtcaacaagaccacagatgaagacgcagcccagatcaagcagaga
tgctccgagctctcgcccgtgcagattgtgaagattcttaactcctacacacccatcgat
gacttcgaaaagcgtgtcgctccgtcgtttgtccgcaaagttcaggcgctgctgcaggag
cgcgaggggtcgtctcagctgatgatggattcacagtatcgtttccaggtcacttttccc
ttctgctcctcaccacaagcactagagctcctacaggtgcccagcagccttcacctgggc
ttcgtcactcgcatttga
DBGET
integrated database retrieval system
