Labeo rohita (rohu): 127156345
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Entry
127156345 CDS
T09007
Symbol
cdhr5b
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127156345 (cdhr5b)
Cell adhesion molecules [BR:
lroh04515
]
Cadherins
Cadherin related
127156345 (cdhr5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Mucin
DUF6039
Motif
Other DBs
NCBI-GeneID:
127156345
NCBI-ProteinID:
XP_050955077
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Position
25:complement(24548210..24562260)
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AA seq
719 aa
AA seq
DB search
MDLRPKGSAAVFILLGIFALSRYSEAQNLCSTPGNIPVIFISENNAPGAVVTTLTAQDGV
NAAITSQNPVGLFSLNGYDLIADTMLDYETFDPSTPYDVNIECTKTGFTSTKLNVKIAVE
DVNDNPPAFSQSQFTLNVDELSKVGTSVGLITATDPDKSDRLYYRMDPEGEFGLESNFNP
NILVREHLDYDKIKQVTVTLYAQDTPLASIAEASYTATTTVVVNIIDIDNRPPWFQPCTE
HDFGTSKVCVNSGYEGTVNLNEASTDPLVLKPGPLYAIDGDKGRNEPIRYEFLTGNQDGI
FVLNTVTGSITVPNPVTLAGPFVLTVMAYQMNNPDQFATTTVILKVVESSNFPPTFEKPS
YKGFISEDAGVDSMVLESKTSTKPLRVKATDKDFSDGYNPNLRFEVVDGSDFSITSEGFI
LMAKEVSPGTLNLEMRVVDTTNDESSTATLAIEVTPGVPTTTPATTTMTSSIKTTETPVS
TTKTKPTGTTETATATTTTMLPPDSVTTTGGQQVNAGSGEFSSAHMAALGGSLAVVIVIC
LVCIALLMHRIKDHNTDWKKISEAGVFRSKLDGGSKEGVQYSNEGFQHDGDSGSVNSLAA
DLENKLESGLKPQEKAITSVTLQTTSSTPPDSSSLAGSETTDGEKEVKPILTKERRNEEG
YKAVWFKEDIDPNTKEDVVIIPNAGEADEDHEEDDDTEDEDNLRTDMDSDDEEGKTSDL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaggcctaaaggatctgccgccgttttcattttgctgggtatttttgcactc
agcaggtacagtgaagctcaaaatctttgctcgactccgggtaatataccggtaattttt
atttcggaaaacaacgctcctggtgccgtagttacaacactcaccgctcaggatggggta
aatgctgccatcactagtcaaaatccagtgggtctctttagcctcaatggatacgatctt
attgctgatactatgctggattatgagacatttgacccgagcactccttatgacgtgaat
attgagtgtacaaaaactggctttacctctaccaaactgaatgtgaaaatagccgttgag
gatgtaaatgataatccaccagcattcagtcagagtcaattcacactaaacgttgatgag
ctgtcaaaagtgggtaccagtgttggcctaatcacagcaaccgatcctgataaaagtgat
agactttactaccgaatggatcctgagggagaatttggcctggagtccaatttcaatccc
aacattctggtgagagaacatctggattatgacaaaattaaacaagtcacagtgacgcta
tatgcgcaggacacaccgcttgcatctatagctgaagcctcctacactgctacaaccaca
gttgtagtcaatatcatagacattgacaatcgtccgccgtggttccagccctgtacagaa
catgactttggcacaagcaaagtatgcgtgaactctggttatgaagggactgtcaacttg
aatgaggcatcgacagatcctttggtcttgaagccaggtccactctacgccattgatggt
gacaaaggcaggaatgagcccattcgttatgaatttcttacaggaaatcaggatggtata
tttgtcctcaatactgtcaccgggagcatcacagtgccaaacccagtaactctagcagga
ccgtttgtccttacagtcatggcatatcagatgaataaccctgatcagtttgccaccact
acagtcatcctgaaggtggtggaatctagcaatttccctccgacttttgagaagcccagt
tataaaggctttatctcagaggatgcgggtgtggacagcatggtgctggagagcaaaacg
tccaccaaacccctcagagtaaaggctacagacaaagacttttctgatgggtataatcct
aaccttagatttgaggttgtagacggctccgacttctcaattacttcagagggtttcata
ctaatggcgaaggaggtttctccaggcactctaaatttagaaatgagggtggttgacaca
accaacgatgaatcaagcaccgcaactctagcaattgaggtcacaccaggggttcccact
accactcctgccacaactaccatgacttcttccattaaaacaacagaaacaccagttagc
accactaaaacaaagccaacaggcaccactgaaaccgccacggccaccaccaccaccatg
ttgcccccagattctgtcacaactacagggggacagcaggtgaacgcaggttcaggtgag
ttcagttcagcccatatggcggctttagggggctctttggccgtggttatcgttatctgc
ttggtttgcattgcactattgatgcaccgcatcaaggaccataacaccgactggaagaag
atttcggaggctggagtcttccgtagcaaacttgatggaggctctaaagagggtgtgcag
tacagcaatgagggtttccagcacgatggtgattctggaagtgtgaacagcttagctgca
gacctggagaacaaactggagtctgggctgaagccgcaggagaaggcgattaccagcgtc
actctccaaaccaccagcagcactccacccgactccagcagcctggctggttcagaaacc
accgacggcgaaaaggaagtcaaacccatcctgaccaaagaacggcgcaatgaggaggga
tacaaagcggtttggtttaaagaagatatcgatcccaacaccaaagaggatgtggtcatc
attcccaacgctggcgaagcggatgaagaccacgaggaagatgatgacactgaggatgag
gacaacctaagaactgatatggattcggatgacgaggaagggaaaacgtcagatttgtag
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