Labeo rohita (rohu): 127156388
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Entry
127156388 CDS
T09007
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127156388 (lingo1a)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
127156388 (lingo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
Ig_C17orf99
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
127156388
NCBI-ProteinID:
XP_050955175
LinkDB
All DBs
Position
25:complement(22632594..22740441)
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AA seq
642 aa
AA seq
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MWAVLVFWPWAELLLTWRSEAESVTGRMVAGEVSGHSFLVACWQPILILMLGTVLSGSAT
GCPSRCECNAQERSVLCHRKKLMSVPEGIPSETRLLDLSKNRIKTINPDEFSAFPQLEEL
ELNENTISTIEPGAFNNLYGLQSLGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVILLD
YMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTL
RLRNLNINSIRDYSFKRLYRLKVLEIANWPYLDTMTTNCLYGLNLTSLTITNANLTSIPY
LALRHLVYLRFLNMSYNPIQMIEGNRLHDLLRLQEFHLVGGRLTMIEPYSFRGLNYLKVL
NVTSNSLTTLEESVFHSVGNLETLALYDNPLACDCRLLWVFRRRWRLNFNRQQPTCSSPE
FVQGKEFKDFPDVLQPNYFTCRKSRIRDRKPQQKFVDEGTTIHFVCQADGDPTPVIMWLS
PQKQFITTKTIGRLTVFPDGTLEVRYAQIQDNGTYMCIASNAGGNDTALAHLHVHSYSPD
WPNQPNKTLAFISNQPNDNGANGTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLF
LWSRGKGNSKHNIEIEYVPRKSDAGMSSGGADAPRKFNMKMI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcggtgcttgtattctggccgtgggcggagcttctgttaacatggagatctgag
gcagagagtgtaaccggtaggatggtagcaggggaagtgagtgggcacagcttcctggtg
gcatgctggcagcccattctaatcttaatgctgggcacagtgctgtctggctctgccaca
ggctgcccatcgcgatgcgagtgcaatgctcaggagcgttcggtcttgtgccaccgcaag
aagctgatgtccgttccagagggaatcccgtcggaaacacgactactggacctcagcaag
aatcgaatcaaaaccatcaacccagatgagttctccgccttcccgcagctggaagagctg
gagctcaatgaaaacaccatttcgaccatcgagcctggggcttttaacaatctctacggc
ctgcagagtctgggactgcgcagcaacaagctgaagctcatccagttgggagtgttcacg
ggcctcagtaacctaacaaagctggacatcagtgaaaacaagatcgtaattctgctggac
tacatgttccaggatctctacaacctgcgctctctggaggttggggataatgaccttgtc
ttcatatcccacagggcgtttcacggcctcagcagcctggagcagctcacgctagaaaag
tgcaacctgacctctgtcccgacagaggccttcacgcacctgcacagcttggttacgctg
cgcttgcgaaacctcaacatcaacagcatcagagactacagcttcaaacggctctaccgt
ctcaaagtgctggagatcgccaactggccctacctggatactatgaccaccaactgcttg
tacggattgaatcttacctccctaacgatcactaatgcaaacctgacatcaattccgtac
ttggccttgcggcatctggtttatcttcgtttcctcaacatgtcctacaatcccatccag
atgatcgaaggcaaccggctgcatgacctgctcagactgcaagagttccacctggtgggc
ggtcgactgacaatgatcgaaccctattccttcagaggactgaactacctgaaagtcctc
aatgtgaccagcaactcccttaccaccctggaggagtctgtattccattcagtggggaat
ctggagaccctcgcattgtacgacaacccgctggcttgtgactgccgcctgctttgggtt
ttccgtcggcgctggaggctgaacttcaaccgccagcagccaacttgctcctcacctgag
ttcgtccagggaaaagagttcaaggacttccctgatgttctgcagcccaattacttcacc
tgtcgcaagtctaggatccgagatcggaaaccccagcagaagttcgtcgacgaaggcact
accatccacttcgtttgtcaagcagatggagacccgacacctgtcatcatgtggctctct
ccacaaaaacaattcatcaccacgaaaacaataggacggcttactgttttcccagacggc
accttggaggtgcgctacgctcagattcaggacaatgggacctacatgtgcattgctagc
aatgccggtggaaacgacaccgctctggcccacctacatgtccacagttactcaccagac
tggcccaatcaacccaacaaaaccttggcatttatctccaaccaacccaacgacaatgga
gccaacggaacgagagcaacagtcccgttcccatttgatataaagacgctaatcatcgcc
accaccatgggcttcatctcgtttttgggtgtggttctgttctgcctggttctgctcttt
ctttggagcagaggcaaaggcaacagcaaacacaacattgagatagaatacgtcccgcgc
aaatcggacgctgggatgagcagcggcggcgccgatgcccctcggaaatttaacatgaaa
atgatctaa
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