Labeo rohita (rohu): 127156413
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Entry
127156413 CDS
T09007
Symbol
myo5ab
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127156413 (myo5ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127156413 (myo5ab)
04131 Membrane trafficking [BR:
lroh04131
]
127156413 (myo5ab)
03029 Mitochondrial biogenesis [BR:
lroh03029
]
127156413 (myo5ab)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127156413 (myo5ab)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127156413 (myo5ab)
mRNA cycle factors
P-body specific factors
127156413 (myo5ab)
Membrane trafficking [BR:
lroh04131
]
Others
Actin-binding proteins
Myosins
127156413 (myo5ab)
Mitochondrial biogenesis [BR:
lroh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127156413 (myo5ab)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
127156413 (myo5ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
AAA_16
nSTAND3
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
127156413
NCBI-ProteinID:
XP_050955213
LinkDB
All DBs
Position
25:22397330..22424922
Genome browser
AA seq
1801 aa
AA seq
DB search
MAAPELYSKFARVWIPDTTEVWRSAELTKDYKPGDTVLHLQLEDETEFEYKLDPKTGLLP
PLRNPDILVGENDLTALSYLHEPAVLHNLRVRFTDSKLIYTYCGIILVAINPYESLPIYG
SDIINAYSGQNMGDMDPHIFAVSEEAFKQMARDEKNQSIIVSGESGAGKTVSAKYTMRYF
ATVSGSSDEASVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFDRKHQIIGANMR
TYLLEKSRVVFQASEERNYHIFYQLCACAHLPEFEPLKLGSADDFPYTNQGRSPIIEGVN
DLKEMEATRKAFSLLGITEAHQMGLFQILSAILHLGNVEVKERGSSSCAISDESGHLAVF
CDLTEVSHKSMAHWLCHKKLKTATETLNKPVTQLEAINGRDALAKHIYAKLFSWIVGQVN
KALSTSSKPHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGLLDLLDEECTMPRGSDESWAQKLYNTHLKKSSHFEK
PRMSNKAFIILHFADKVEYQCDGFLEKNKDTVNEEQINVLKASKFALLVELFQDEETSAA
PSTAPPSGRAKVGRSTQSFREHKKSVGLQFRNSLHLLMDTLNATTPHYVRCIKPNDVKAP
FMMDPHRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMRQKEILSDRKLTCQS
VLERLVQNKDKYQFGKTKIFFRAGQVAYLEKLRADKLRTACIHIQKTIRCWLARKKYLRI
RQATITLQKYTRGHQARCLCNTLRRTRAAVIFQKYTRMWAARRHFLRQKAAAVLIQRLLR
GYTARLEYKRLVCEHKALLIQRWVRGFLARWRYRRIKRAVVYLQCCVRRMLARRELKKLK
IEARSVEHYKKLNVGMENKIMQLQRKLDEQHKENRELSEQIRQIESHSAVELEKLHLQLT
TLQEAEEEAHQRGDLVISLKEELEMVRQELKKNKEMVAELNEKNTLLKSEKDEMNRLIQE
QEQQIKEKSESTHEEATEHLQAQLNEERFRYQNLLTEHLKLEERYADLRSEKEAVEELSK
PGHNRADSGYSSSQSESVHSSVLTGSEVSSLEKEDAGQTAADVSLLLKLQRRVAELEKEK
MDLQSEMDTKEEQLQLERTKELEDCQKVLGAERDYEALKRQELESDNKKLKKDLQELRQS
LTKGSGSKVASPGGQAYNVLLEQLNSTTEELEMRKEEVLILRSQLVNHETFKHKETGTEG
DSGDSSRSPTLDLRELNEDGELWMAYESLKETNRILESQLQTQGQSHEKEMEDLRAELQR
LKAELIQEQQMLSDSLELPHDARIQASLQHEISRLTQQNMDLLEQMGKQDKMIRKLKKHL
KIYVKKFGEAEGVHIEQSSPENIVGESGRMVSIVRKERDFQGMLEYRREDESKLFKILIT
ELKPRGVAVNLVPGLPAYILFMCLRHADYANDDQRVSNLLNTSINAIKNVFKKRGDFETI
SFWLANTCRFLHCLKQYSGEEAYTKYNTPRQNEHCLTNFDLSEYRQVLSDLAIQIYQQLI
RVIENILHPMIAPAMLEQETIQGVMGVKPTGMRKRTSSFHEESSHSLESILKQLDVFYYT
LLQHGNDTELVRQVIKQQFYVICSVTLNNLLLRKDMCSWSKGLQIRYNVCQLEEWLLDKD
LQGSGARESLEPLIQAAQLLQIKKKSQDDAEAICTMCTALTTEQIVKILSLYTPVNEFEE
RVSISFIKSVQTLLKDRKESSQLLMDAKIIFPVTFPFNPSTLALETIQIPNSLNLNFLTR
V
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccggagctctactcgaagtttgctcgagtttggatcccagacaccacagag
gtgtggagatcagcagagctcaccaaagactacaagcccggagacactgtcctacatcta
cagctggaggatgagacggagttcgagtacaagttggaccccaaaactggtcttctgcct
cctcttcgtaacccggacatcctggtgggcgagaatgacctcacggctctcagttacctc
catgaaccggccgtgctgcacaatctccgggtccgattcacagactccaaactcatctac
acctactgcggaatcatcctggttgccatcaatccatatgaaagtctcccaatctatggc
tcagacattatcaatgcttacagtgggcagaacatgggtgatatggaccctcatatcttt
gccgtgtcagaagaggcctttaaacagatggctagagatgagaagaatcagtccatcatc
gtaagtggagaatctggtgcaggaaagaccgtttctgccaaatacaccatgcgttacttt
gccacggtcagcggctcctctgatgaggccagcgtggaggaaaaagtgttggcgtccagc
cccatcatggaggctattggaaacgccaagacgacgagaaacgacaacagcagtcgcttt
ggaaagtacattgagattggatttgacaggaaacaccagatcattggagccaacatgagg
acgtatcttctggaaaagtctagagtggtgtttcaggcgagtgaggagagaaactatcac
atcttctatcagctctgtgcttgtgcccatttacctgaatttgaacctctcaagttaggt
agcgctgatgactttccctacactaaccaaggcagaagtcccattattgagggagtaaat
gacctgaaggagatggaggccacaaggaaagctttttcactgctgggaataactgaggca
caccaaatgggtttattccaaatcctgtcagccattcttcatctggggaatgtggaagtg
aaagagagaggatcatctagttgtgccatctctgacgaaagcggccacctggcagtgttt
tgtgacctcacagaggtgtcacacaagtccatggctcactggttgtgtcataaaaaacta
aaaactgccacagaaaccctaaacaagcctgttacccaactagaagccataaacggccgt
gacgctcttgcgaaacacatctacgccaagctcttctcatggatcgtcggccaggtcaac
aaggccctaagcacttcctccaaaccccactcgttcatcggtgtcctagacatctatggg
tttgagacgttcgaggtgaacagctttgagcagttctgcatcaactacgccaacgagaag
ctccagcagcagtttaacatgcacgtgtttaaactggagcaggaggagtacatgaaggag
cagataccatggacgctcattgatttctacgacaaccagccgtgcatcaacctgatcgag
gccaagatgggcttactagatcttttagatgaagaatgcactatgccaagaggttcagat
gaatcgtgggcgcaaaagctttacaacactcacctaaagaaaagctctcactttgagaag
ccacgcatgtctaacaaagccttcatcatattgcactttgcagacaaggttgaataccag
tgtgatggatttctggagaaaaataaagacacagtcaatgaagaacaaattaacgtgctg
aaggctagtaagtttgccttgctggttgagcttttccaggatgaggaaacatctgcagct
ccgagcaccgcaccaccatctggtcgtgccaaggttgggcggtccacccagtcttttagg
gagcacaagaaatcagttggactgcagttccggaactctctgcacctgcttatggataca
ctgaatgccaccaccccacactatgtgcgctgcatcaagccaaatgacgttaaagccccc
ttcatgatggaccctcatcgagccgttcagcagctcagagcgtgtggagtcctcgagacc
attcgtatctcagccgcaggcttcccttccaggtggacttatcaagagttcttcagccgc
tatcgtgttctaatgaggcagaaagaaatcctctcagacaggaagttgacctgccagagt
gtcctagaaaggcttgtgcagaacaaggataaataccagtttggaaaaacaaagatcttc
ttccgggctggacaggtggcttacctagaaaagctgagggctgataaacttcgcacggcc
tgcatccacatccaaaaaaccatccggtgctggctcgcccgcaagaaatatctgcgtatt
cgccaagcgaccattactttgcaaaaatacacaagaggacaccaggctcgatgcttgtgc
aatacactgagaagaacacgggccgcagtgatctttcagaagtacacacgcatgtgggca
gccagacgacatttcctgcgccagaaagcagcagcggttctcattcagaggttattacgt
ggctatacagccagactggagtacaaacggttggtgtgtgagcacaaggctttactgatc
cagcgctgggtgcgtggctttctggcccgctggcgttaccgtcgcatcaagcgggctgtg
gtgtatctgcaatgttgtgtgcgtaggatgctggcccggcgagagctcaagaaactcaag
attgaagccagatcggttgagcattacaagaagctcaatgtaggcatggagaacaagatc
atgcagctgcagaggaaactggatgagcagcataaggagaaccgagaactttctgagcag
ataaggcaaattgagagccacagtgctgttgaattggagaagttgcacctgcagctcacg
actcttcaagaggcagaagaggaggcccatcagcgtggagacctggtgatatcattaaag
gaggagctggaaatggtccgtcaggagctgaagaagaataaagagatggtggctgagctg
aatgagaagaacacactactgaagagtgagaaagatgagatgaacagactgatccaggaa
caggagcagcagataaaagaaaagtcagagtcgacccatgaggaggccacagagcacttg
caagcacagctgaatgaggaacgcttccgttaccagaaccttctgaccgagcacctgaag
ctggaggagcgctatgctgatctgagatcagaaaaagaggcggttgaagagctctccaaa
cctggtcacaacagagctgactctggctacagcagcagccaatcagagagcgtccacagc
tctgtgctcacagggtcagaggtcagctcgctagaaaaagaggatgctgggcagacggca
gctgatgtgtccctgctgctgaagctccaaagaagagtggctgagctggagaaggagaaa
atggacctgcagagtgagatggacaccaaagaagagcagctacaactggaacgaactaaa
gaactggaagattgtcagaaagtgttaggggctgagagagactatgaagctctgaagcgt
caggagctggaatctgacaataagaagctcaagaaagatctacaggagctccgtcagtcc
ctcactaaagggtcggggtcaaaggtggcgtcccctggaggtcaggcatataacgtgctc
ctcgaacagctcaactccaccactgaagagcttgaaatgcgcaaggaggaggtgctcatt
ttgcgatctcaactagtcaaccacgagacatttaaacataaggaaacaggaactgaagga
gattccggtgactcaagcagatcccccacactggaccttcgtgagcttaatgaggatgga
gaactctggatggcttatgagagcctgaaggaaactaacaggattctggagtcacagttg
cagactcagggacagtcccatgaaaaggagatggaagatttgagggcggagcttcagcgg
ttaaaggcggagcttattcaggagcaacaaatgctgtcggacagcttggagcttccacat
gatgctcgaatacaagcaagcctgcagcatgagatcagtcgcctcacgcaacaaaatatg
gacctcttggagcaaatggggaaacaggacaaaatgatccgcaaactaaagaaacacctg
aaaatatatgtgaaaaagtttggggaggctgaaggtgttcatatcgagcagtcctctcca
gagaacattgttggtgaaagcggtcgcatggtcagtattgttcgcaaagagagggatttc
cagggcatgctagaatacagaagagaagatgagagcaaactgttcaagatactcatcaca
gagctcaaacctcgaggtgtggcggtgaatttggtcccaggtctgcctgcttacattctc
ttcatgtgtctgcgacacgctgactacgccaacgatgaccagcgggtctccaacctactg
aacacctccatcaatgccatcaagaatgtatttaagaaacgaggagattttgaaaccatt
tccttctggttggcaaacacctgtcgtttcttacattgcttgaagcagtacagtggagaa
gaggcatacacaaagtacaacacgccccggcagaacgaacactgtctgacaaactttgat
ctgtcagagtaccggcaggttctgagtgatctggctattcagatctaccagcagctcatc
agggtcatagaaaacattttacaccccatgattgcaccagccatgttggagcaggagacc
attcagggtgtgatgggcgtgaagcccacaggaatgaggaagcgcacatccagtttccat
gaggagagctctcactcactagagtctattttgaaacagttggatgtgttttattacaca
ctgcttcagcatggcaatgacaccgagctcgtccgacaggtcatcaaacagcagttctac
gtcatctgctctgtcacactcaacaacttactgctccgcaaggacatgtgctcctggagt
aaaggcctgcagatcaggtataatgtatgtcaactggaggagtggttgctggataaagat
cttcagggcagtggagcgcgtgagtctctggagcctctgattcaggcggcccagcttctg
cagatcaaaaagaagagccaggacgatgcagaggccatttgcaccatgtgtacagctctc
accactgaacagattgtgaaaatcctcagcttgtacacaccagtcaatgagtttgaggag
agagtgtctatatcattcataaagtctgtacagactttattaaaggatcgtaaggagtct
tctcagttactaatggatgccaagatcatttttccagtcactttccccttcaacccttca
accctggccctcgagaccatccagatccccaacagcctcaacctgaacttcctgacacga
gtttaa
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integrated database retrieval system
