Labeo rohita (rohu): 127156422
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Entry
127156422 CDS
T09007
Symbol
poc1b
Name
(RefSeq) POC1 centriolar protein homolog B
KO
K16482
centriolar protein POC1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127156422 (poc1b)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127156422 (poc1b)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
127156422 (poc1b)
Cilium and associated proteins [BR:
lroh03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127156422 (poc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Tricorn_2nd
Beta-prop_DCAF12
RMC1_N
Beta-prop_NWD2_C
Beta-prop_Nup120_160
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
eIF2A
WD40_like
PEP5_VPS11_N
Beta-prop_WDR75_2nd
Beta-prop_ACSF4
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
127156422
NCBI-ProteinID:
XP_050955221
LinkDB
All DBs
Position
25:14373000..14425358
Genome browser
AA seq
487 aa
AA seq
DB search
MASVMEDPTLERHFKGHKDVVSCADFSPNNKQLATGSCDKNLMIWNLTPKARAFRFVGHT
DIITGVHFSPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVQFSSDGQRLVTA
SDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLVASCGDDRTVRLWDTSSRQCIN
IFTDYGGSATFVDFNSSGTCIASSGADNTLKIWDIRTNKLIQHYRVHSGGVNCFSFHPSG
NYLISGSSDTTMKILDLLEGRLIYTLHGHKGPVLAVAFSRDGDLFASGGADSQVLMWKTN
FDSLNYKDVLSRHSKRVTPDPPPHLMDIYPRSSHRHSAQNGTVEINPIVADTQSGDPQVV
EVGRVLFSTADVRSHDSATSSRDQPFSGPNRAHTRPREEEDEDQEERFASGMTTSREECL
GIPSSLTSTLENIVQQLDILTQTVAVLEERLTLTEDKLRTCLDNQVLLLQQTQQVDESDE
EAEGPSA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgtaatggaggatcccactcttgagagacattttaaaggtcacaaagatgtt
gtttcctgcgccgacttcagccccaataataaacagcttgctactgggtcctgtgacaag
aaccttatgatctggaacctcactcctaaagccagggcgttcaggtttgtgggtcacaca
gatatcattacaggtgtccatttttctccaagtggttccttggtggcatcttcatccaga
gaccagacagttcgactgtggacacccagcataaagggcgagtcgactgtgttcaaagcc
cacacagcgagtgttcgaagcgttcagttctccagcgatggccaaaggctggtcacggct
tcagatgacaagtctgtgaaagtgtggggtgtcgaacggaagaaattcctctactctctc
aaccggcacaccaactgggtgcgctgtgcgaggttttcaccagatggtcgtcttgttgct
tcctgtggagatgacaggacggttcgcctctgggatacatcctcacggcagtgcatcaac
attttcacagactatggagggtcagcaacatttgtggacttcaattccagtggcacatgc
attgcgtcatcaggagcggacaacacattaaaaatctgggatattcgtacaaacaagttg
atacaacattacagagttcatagtggtggggtcaactgcttttccttccatccatctgga
aactatctgatcagtggttcgagcgacactacaatgaagatcttggacctcctggagggg
aggctcatttacacccttcacggccacaagggtccagtattggctgttgcgttttctcga
gacggagatctgtttgcttcaggaggtgctgattctcaggttctcatgtggaagaccaac
tttgattcgctgaattacaaagatgtgttgagcaggcatagcaaacgagtcactccagat
ccccctccacacctgatggacatctaccctcgatcatctcaccgacacagtgctcagaat
ggcacggtagagattaatcccattgttgctgatactcagtctggtgaccctcaggtggtt
gaagtgggacgtgttcttttctccacagcggatgttagaagccatgacagtgcaacaagc
agcagagatcagcccttctcaggtccaaatcgggctcatacgcgacccagagaagaggag
gatgaagaccaagaagaaaggtttgccagcggtatgacaacatctagagaagagtgcttg
ggtatcccatcaagccttactagcactctggagaacattgtgcagcagttggacatcctg
acccagaccgttgccgtccttgaggagcgccttaccttgaccgaagacaaactgaggaca
tgcctggacaaccaggtcctgcttctgcaacagacgcaacaagtggacgaatctgatgag
gaagccgagggaccatctgcgtga
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