Labeo rohita (rohu): 127156433
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Entry
127156433 CDS
T09007
Symbol
cald1b
Name
(RefSeq) caldesmon 1b
KO
K12327
caldesmon
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
127156433 (cald1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127156433 (cald1b)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
127156433 (cald1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
127156433
NCBI-ProteinID:
XP_050955241
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All DBs
Position
25:complement(13127255..13167592)
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AA seq
565 aa
AA seq
DB search
MDEDFDFERRRELRRQKREEMQREAEKMNSHDDEEEAARERRRRARQERLRNMENEESSN
TTTETNSTETSSLITSSAPTEEDEQALLERLAKREERRQKRMKEALERQKEDDPTITDET
VTTDTTTTTTEDEPSHRNSEQESSQNDVSSTETKEKEMEEKKEEENIEESKVEETITKKE
DPAPVTEAEEPKESSEKDDKPEEEDKPQRSQLREQESTEEKPKEPAVPNEVVEEKPKPSF
VRDKLKVSTKPQDVADSTAKAKKPEKTLSPTSLRSPETEKQDPIAKLEAERKLQELKRRR
NETDSEVLEKMKQKQQTAEAELEELKKKREERRKILEEEEKQKKQQLAEKKAKEEEERRK
MKEEIERRRAEAAEKKKQQEESKEGSKAPFIAPKGASAKIGEKAEFLNKSALKSPVKTSH
TPLVCKIGNRLEQYTSAVQTKEVTKSPKSPVDVPGAEGMRSIKSMWEKGNVVNPTQSPAS
PPAVTKETAGLNVGVAGRINSWKTKTPEPKTPEAKPAPEPEKPPAKTEQKPAEVTKPRGP
WETKGSTPPKVFAAKSKFVTNGTRK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggactttgattttgagcgtcgcagagagttacggagacaaaagcgagaagag
atgcagcgggaggcagagaagatgaactctcacgatgatgaggaggaggcagcccgggaa
cgtcggagacgagcccgtcaggaacgtctgcgcaatatggagaatgaagagtcgagtaat
actacaacagaaacgaacagtacagagacgtcctcattgatcactagctctgcaccgact
gaggaggatgagcaggctctcttagaaaggcttgccaagagagaagagcggagacagaaa
aggatgaaggaagctttggagagacagaaggaagatgatcctaccatcactgatgaaact
gtcaccaccgacaccaccaccaccaccacagaggacgagccaagtcatagaaacagcgaa
caagagtcctctcaaaatgatgtttcttcaacagaaaccaaggaaaaggaaatggaagag
aaaaaagaagaggaaaatatagaggaaagcaaagttgaggagacaattacaaaaaaggag
gatccggcaccagtcacagaggcagaggaacctaaagaatcttctgagaaggacgacaaa
ccagaagaggaagataaaccacagaggtcccaactcagagaacaggaatccacagaggaa
aaacccaaagaaccagctgtaccaaatgaggttgtagaggaaaagccgaaaccttccttt
gtacgggacaaactgaaagtgtcaacaaagccgcaagatgtagctgacagcaccgccaaa
gccaagaaaccagagaagacactaagtcccaccagcttgcgttctcctgaaacagagaag
caagatcccatcgccaagctggaagcagaacgcaagctgcaggagctgaagcgcaggcgg
aacgagacggacagcgaggtgctggagaagatgaagcagaagcagcaaactgcagaggcc
gagctggaggagctgaagaagaagagggaggaaaggaggaagattctggaggaggaggag
aagcagaagaaacagcagttggcagaaaagaaagccaaagaggaggaagaaaggaggaag
atgaaggaagagattgagcgaaggagagcagaagcagctgagaaaaaaaaacaacaggag
gagtcgaaagaagggagcaaagcaccattcattgctccgaagggcgcctccgcaaagatt
ggagagaaagcagaatttctgaacaaatctgctctgaaaagtccagtgaagacgtcacac
actccattagtttgcaagattggaaacagactagagcaatacacttctgctgttcagacc
aaagaagtgaccaagtcaccaaaatctcctgtggacgtacctggggctgaagggatgcgg
agcatcaagagtatgtgggagaaggggaatgtggtcaatcccacccagagtcctgcaagc
cccccagcagtcaccaaggaaacagctggtctgaacgtcggtgtggctggtcgcattaac
agctggaaaaccaagactccagagcccaaaactcctgaagccaaaccagctcctgaacca
gaaaaaccacctgccaaaacggagcaaaagccagctgaggtcactaaaccacgtggccca
tgggaaacaaagggctccacacctcccaaggtgttcgcagccaagagtaaattcgtcaca
aacggaacaagaaaatga
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