Labeo rohita (rohu): 127156465
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Entry
127156465 CDS
T09007
Symbol
cpeb1a
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 1a isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04114
Oocyte meiosis
lroh04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
127156465 (cpeb1a)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
127156465 (cpeb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127156465 (cpeb1a)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127156465 (cpeb1a)
Factors involved in mRNA localization
Trans-acting binding proteins
127156465 (cpeb1a)
mRNA cycle factors
P-body specific factors
127156465 (cpeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEBP1_N
RRM_7
CEBP_ZZ
RRM_1
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
127156465
NCBI-ProteinID:
XP_050955287
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All DBs
Position
25:23439306..23453494
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AA seq
534 aa
AA seq
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MDFWRREEKHCSDAYGDPGADGVFGPLTGANPQNVWKHFPDGSGTACSPLVSRMLFAPEQ
QDPLAAVPSVDELSLGLLSLSFPCWNQQPWSRPESQQATQPCSQTPALDLLGASEGSDSG
QQHAFQTHESASGDPLEHFSSLMAALEPHSLLHSGSSSPVNSENSAISSGSDHLVSLRVS
PPLPLMLPGLQAEGVKLDTDARLEQNPLNAFTNASSARAEGSVVGCWSTGPVWPGWDALG
LKKPTFCIEREAKLHKQAAAVNEATYTWEGRLPPRHYKNPVYSCKVFLGGVPWDITEASL
LNTFSVFGPLKVEWPGKDGKHPRCPPQGYVYLLFDWEKSVKTLLQACTQHRLQSDDYLEF
YYKLSSRRIHSKDVQVIPWVISDSNFIRCPSQRLCRSKTVFVGALHGMLNAEGLAHIMDE
LFGGVMYAGIDTDKHKYPIGSGRVTFRSQRSYLKAVTAAFVQIKTCKFTKKVQIDPYLDD
SMCQICNSQPGPFFCRAQACFKYYCRSCWHWRHSLDVLSSHQPLMRNQKGLNPK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggatttctggaggagagaggaaaaacattgcagtgatgcttatggagatcctggagct
gacggggtctttgggccgctcacaggagccaatccgcaaaatgtttggaaacacttccca
gatggttcaggcacagcctgctctccgctggttagcagaatgctgttcgctccagagcag
caggatcctctggctgccgtgcccagtgttgatgagctcagtctgggcctgctgtctctg
agcttcccctgctggaaccagcagccctggagccgcccagagtcccagcaggcgacccaa
ccctgctcccaaacgcccgcattggatctcttgggtgcttcagaaggcagtgattcaggt
cagcagcacgctttccagacccatgagtctgcatctggagatccactggagcacttctcc
agcctcatggcggcactcgaacctcactctctgctgcactcgggatccagcagccccgtc
aactcggagaacagcgccatctcgtcaggatccgaccacctggtctctctcagagtttct
cctccattgcccctgatgctgcctggactgcaggcagagggtgtgaaactggacacggat
gcccgtttggagcagaaccctctaaacgccttcacgaatgcttccagtgcacgggccgag
gggtcagtggttgggtgctggtccacaggtcccgtctggcccggctgggacgctttgggc
ttgaagaaacccacgttctgcatcgagagggaggcgaaactgcataaacaagctgcagct
gtaaatgaagccacttacacctgggaaggacgacttcctccacgccactacaaaaaccct
gtttactcctgtaaagtgtttctgggaggagtgccatgggacatcacagaggcgagtctg
ttgaacacatttagtgttttcggtccattgaaagtcgagtggcctggtaaagatggtaaa
catccacgctgtcctccgcaaggttacgtgtatctgctatttgactgggagaagtcagtg
aagacgctcctgcaggcctgtactcaacaccgcctgcagtctgacgattatctcgagttc
tactacaaactgtccagcaggcgaatccacagcaaagatgtgcaggtcattccatgggtg
atctcagacagcaatttcatccgctgtccctctcaacgcctctgccgcagtaagacggtg
ttcgtgggcgctctgcatgggatgctaaatgcagagggtctggcccacatcatggacgag
ctctttggaggggtcatgtacgcaggcatcgacacagacaagcacaaatatcccataggc
tccggcagagtgacgttcaggagtcagaggagctacttgaaagccgtgactgcagcgttt
gtgcagattaaaacctgcaagtttaccaagaaggtccagattgacccgtatctggatgac
tccatgtgccaaatctgtaacagtcagcccggcccgttcttctgtagggctcaggcctgt
ttcaaatactactgtcggtcatgttggcattggcggcactctctggacgtgttgagcagc
caccagccactcatgcgcaaccagaagggcctgaaccccaaataa
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