Labeo rohita (rohu): 127156483
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Entry
127156483 CDS
T09007
Symbol
shank2b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2b
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
lroh
Labeo rohita (rohu)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SAM_2
Ank_3
Ank_5
SH3_2
PDZ
SH3_9
FERM_f0
PDZ_6
SH3_1
SAM_4
CUB_M02D8_5_3rd
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
127156483
NCBI-ProteinID:
XP_050955323
LinkDB
All DBs
Position
25:complement(17122832..17244979)
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AA seq
1833 aa
AA seq
DB search
MPRSPMSSEEEMAQSFSDSVSSESDSSRDEPPRLDRPTSARLDNSLRDTMLICVVIPDLQ
QSKSMRFSPDATVWVAKQQILCTLTQSLRDVLNYGLFQPAVDGRESGFLEEERPLKDYPF
STNKGVPTLEFRYKSRVYQQPHVNEKQIEKLHTQVNLRKFMDYIQHHQVDKVSKMLERGL
DPNYHDPETGETPLTLAAHLDNMVEIIVTLKNGGAHLDFRSRDGMTALHKAARAKNQTAL
KTMLDLGASPDYKDRQGLTPLYHTVTVGGDPSCCEVLLRAHASVGCHDENGWHEIHQACR
YGHIQHLEHLLFYGADMHVENASGNTALHICALYKQEKCARVLLVRGANKDVKNYRGQTP
FQVAIIAGNFELAEFIKNHKDADIVPFREAPAGTGRSRPLQQTPPQHQGRSTLAAPRVLL
RSNSDNNLNVNKLPLDRSRSPSPAASPLRSLSPRHPQQMQNSPNGTVKTMARGGRSARSR
SPSLGRLGEGDTRRQTPQRHSSPRANRDAYSGMDTPGSKRKLYSAVPGRHYVVVKSYQPQ
GEGEIALYKNDRVKVLSIGEGGFWEGSARGNVGWFPAECVEEIPSKPNEDRPYARADRSE
RRKLFRHYTVGSYDSFDASSDCVINEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPA
FPALQYLESVDEGGVAWKAGLRTGDFLIEVNQDNVVKVGHKQVVNMIRHGGNHLIIKVVT
VSRNLDPDDTARKKAPPPPRRAPSTALSMRSKSMTSELEDLVDKATLRKKKDDQLSDNEG
LKKRIVFQVTLNKVDEVVPPQKPVWDNSNADVRVATVKPRPTSKCFAVSPEMNSLCNSQD
TAVDSPQQPGSPRGPFLGVPKGTIRRQTSIGVTEEEKQFLTPPMLKFTRSLSMPDTSEDI
PPPPAISPPSPPHNNAPVPAGRGYGTIRPGFTSQSPNANSTAPDRGEGAGWRDQGMYYRD
SPEQYDSEGYNHSPTAQQSLHMRRAQVPENPYSDVGKMGQAGLFVPNKPARRKGMLVKQS
NVEDSPEKTCSIPIPTIIIKEPSTSSSGKSSQGSSMEIETTTPDHPGQLRPEDGLNPASP
FAAAIAGAVRDREKRLDAHRNSPSFKSTDAGDEDVVPTPAPRLRHSKSIDEGMFSSDERL
RRLMAPPSSLLSIPRGGGNVTDFNSPEPTMVRELLNTRTGHSPISLPAHKTYSSGSGNYV
HPVTGKPLDPNSPLALALAARDRAMREQSQPLPLKSDPSKLDLNKPLFIDTKLRPNVEVG
FSSTATMGRPRGGLRRQMTESKYETESKYQLDLGKPEKRPEEKKNMLIDIVDTSQQKSAG
LLMVHTTDGAKSEDNSLSEGDRDEAVSPDNTPGELRDPNQPAPTNPPAPKALSAAPHGKT
IITVSSVDEPVKLPFGIPPPPLASVDIDEEFVFAEPLPPPLEFANSFDIPEDQAGTIAEL
LKQKTNGTKGPSLAPYYPPLGGGNSEIKRPTVLTNCTPPSFPPGPLEPYEQITDSGIEVD
SRSSGDPQLETTSTISTVSSISTLSSEGGETLDTCTVYADGQAFLVDRSQILSKPKPKPA
IKSNALYKDALPEENVSSFRMPSSVPPPPPGSIPPEPLKTPTQRTSKLWGDPPEMKGPHG
PEANSVLQHVNKDKAPKPGEALDSPTGSRTHFGTRNQDGVSLISGTQQNTTVTFTAQPGP
NVPAPSPCRQAESLPPHHHTPSPIMSPPDSGLSCASSLPTSATSPTMTDVFGLPTPPLSL
GTGRSRSPSPLTLIQAASNKPFATKPVLMWSKQDVADWLESLNLGEHRDAFMDNDIEGSH
LPNLQKEDLIDLGVTRVGHRMNIERALKVLLDR
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggagccccatgtctagcgaggaggaaatggctcagagtttttcggactcggtc
agttcggaatcagacagctcccgagatgagcctcccaggctggatcgacctaccagtgcc
cgactggacaacagcctgcgagacacaatgctcatctgtgtggtcatccctgacctgcag
cagtctaaatccatgaggttcagtcctgatgccacagtatgggttgctaagcagcagatc
ctgtgtacactcacacagagtctgagagatgtgctcaactacgggctcttccagccagcg
gtggacgggagggagagtggtttcctggaggaagaacggcccttgaaagactatccgttc
tccaccaataaaggcgttccaacccttgagttccgctacaagagcagagtgtaccagcag
ccacacgtcaacgaaaagcaaatcgaaaaactccacacgcaggtcaacctgaggaagttt
atggactatatccagcatcatcaggtggacaaagtctccaagatgttggaaagagggttg
gaccccaactatcatgaccctgaaactggtgagacaccactaacccttgcggcccacctg
gacaatatggtggagattatagttacactgaagaatggcggagctcatttagatttccgc
tctcgggatgggatgactgccctgcacaaagcagccagggcaaagaaccagacagctctt
aagacgatgttggatttgggagcgtctccagactataaggaccggcagggcttgactcca
ctctaccatacagtaactgtagggggagacccgagctgctgcgaggtcctgctgcgtgcc
catgccagcgtgggatgccatgatgagaacggctggcacgagatccaccaggcttgtcga
tatgggcacatccaacatctggagcatctcctgttctatggagctgacatgcatgtggaa
aatgcatctgggaatacggctcttcatatctgtgctctgtacaaacaggaaaagtgcgcc
agggttcttctggttcgcggagccaacaaagacgtcaagaactatcgaggacaaacgccc
ttccaggtggcaataattgctggaaattttgagcttgcggaattcataaagaatcacaaa
gacgctgatatagtgcctttccgggaggcaccggcaggcacgggtcggagcaggccgctg
cagcaaacgccgccgcagcaccagggtaggagcactcttgccgccccacgcgtgctgctc
cgctccaacagcgacaacaacctgaacgtcaacaagctaccgctggaccgctctcgctcg
ccctctcctgccgcctcccccctgcgcagcctctcgccccgccacccccagcagatgcag
aacagccccaatggcacggtgaagaccatggcccgggggggacgctccgcccgaagccgt
tccccttccctgggccggctaggggaaggagacacccggagacagacccctcagcgccac
agcagtccccgtgccaacagggatgcctactccggcatggacactccagggtccaaacgc
aagctgtacagtgccgtgccaggaagacactatgtggtggtcaagtcttaccaaccacag
ggcgagggagaaatcgcattgtataagaacgacagagtcaaagttctcagtattggagaa
ggaggattctgggaaggcagtgcccgagggaatgtaggctggttcccagcagaatgcgtg
gaagagatcccaagcaaacccaacgaggacaggccatatgcccgggcagaccgatcggag
agaaggaagctctttcgacactacactgtgggatcttatgacagttttgatgcatcaagc
gactgcgttatcaacgaaaagacggtcgtgctgcagaagaaggataacgagggattcggg
ttcgtgttgagaggggcgaaagctgatactcccattgaggagttcactccgaccccggca
ttccctgctttgcagtatctggagtctgtggacgagggaggggtggcatggaaagctggc
ttgaggactggagacttcctcatcgaggtgaaccaggacaatgtcgtcaaagtgggccac
aaacaagtggtcaacatgattcgtcacggcggcaaccacttaattatcaaagtggtgacg
gtcagtcgaaatcttgaccctgatgacacggctcgaaagaaagcgccaccaccacctcgg
agggctccctccacagccttgtccatgcgttcaaaatctatgacctcagagctagaagac
ctagtggataaagccactttgaggaaaaagaaggatgatcagctttcagataatgagggt
ctgaagaagaggattgtatttcaagtcacactaaataaagtggatgaggtcgtgcctccc
cagaaacccgtgtgggacaactcaaatgcagacgtgagggtggcgacagtcaaaccacgt
ccgactagcaagtgttttgctgtcagccctgaaatgaattctctctgcaatagtcaggat
acagcagtagactcgccacaacagccagggagtcctagaggccctttcctgggtgtacca
aagggaaccataaggaggcaaacatctataggagtaaccgaagaagagaagcagttcctt
actcctccaatgttgaaatttacaagaagcctttcaatgcctgacacatcagaggatatt
ccaccaccaccagccatctctcctccatctccacctcataataatgctcctgtcccagct
ggtcgaggatatggcaccatcagaccaggctttacttcacagagtcctaatgcaaacagc
acagccccagacagaggtgaaggtgctgggtggagagatcagggcatgtattacagagac
agtcctgagcagtatgattccgaggggtacaatcacagcccaactgcccaacagagtctt
catatgcgccgtgcccaagttcctgagaacccttactcagatgtgggaaaaatgggtcaa
gctggactgtttgtccccaacaagcctgccagaaggaagggaatgcttgtcaagcagtcc
aacgtagaagacagtcctgagaaaacctgctccatcccaattccgaccataataatcaaa
gagccctccaccagcagcagcggaaagagcagtcaagggagcagcatggaaattgagacg
accacaccggatcacccgggacaactgcgtcctgaagatggcttgaatccagccagtccc
tttgcagctgccattgctggtgcagttagagacagggagaagaggcttgatgctcatcgc
aactccccatcttttaagtccacagatgcaggtgatgaggacgtggtgcctacaccagcc
ccacgtctccgacactccaagtctatcgacgagggcatgtttagcagcgatgagcggctg
cgtaggctcatggcacctccctcatcactacttagcatccctagaggtggaggtaacgtg
acggacttcaacagccctgagcccaccatggtaagggaactgttgaacacccgtacagga
cacagcccgatcagtctgcctgctcataagacctacagctcaggaagtgggaattacgtt
cacccagtaacaggcaagccactagatcccaattcaccattagctttagcgttagctgct
agagaccgagccatgagggagcaatcacagcctcttccgctaaagagcgacccatccaaa
cttgatctcaataaaccgctttttatcgacaccaagcttagaccaaatgtggaggttggc
ttctcaagtaccgctaccatgggccgtccccgcggtggcctgcggaggcagatgacggag
tccaaatatgagactgaatccaagtatcagctcgatctgggcaagcctgagaagaggcct
gaggagaagaagaacatgctgattgacattgtggacacttctcagcagaagtcagctggt
ctgctgatggtacacaccacagatggggcaaaatcggaggataacagcttgtcagagggc
gacagggacgaggcagtaagtcccgacaacacccctggggagcttcgcgaccccaaccag
ccagctcccaccaaccccccagctcccaaggcgctatcagctgctccacatggcaagacc
atcataactgttagctcagtggatgagcctgtcaagctgcccttcggcatccctccgccg
cccttggcctctgtcgacatcgatgaagagtttgtgtttgctgaacccctaccaccccca
ctggagtttgccaacagttttgacattcctgaagaccaggcggggactatagctgaattg
ctcaaacagaagacgaatggtacaaaagggccttctcttgcgccctactatcccccatta
ggtggtgggaattctgaaatcaaaagaccaacggtcctcacaaactgcacacctcccagt
ttccctccagggccgctagagccctatgaacaaatcactgactcgggcattgaggtagac
agccggagcagcggtgacccccaactggagaccaccagcaccatctctactgtgtccagc
atctccacattgtcttctgaaggaggcgagactctggacacatgcaccgtctatgcagat
ggacaagcctttctggtggacagatcgcagatcctgtccaaaccaaaacccaaacctgcc
atcaagagcaatgcactttacaaggacgctttgcctgaggagaacgtgagctcttttaga
atgccctcctctgtcccacctccgccccctggatcaattccaccagaacccttgaaaacc
ccaacgcaacgaacctcaaagctgtggggggaccctccggaaatgaaaggaccccatggc
cctgaagccaattcagttctgcagcatgtgaacaaggacaaagcaccaaagccaggggaa
gcattagactctccgaccggatccaggactcacttcggaacgagaaatcaggatggtgta
tccctcatctcaggtacacagcagaacaccaccgttaccttcactgcccagcctggcccc
aacgtgcctgccccgtcaccgtgccgacaggccgagagcctgcctccccaccaccacacc
ccgagccctatcatgtccccgccagactctggcctcagctgtgcctcttcccttccgacc
tcggccacttcccccaccatgacggacgtatttggtctgcccacaccgcccctcagcctg
ggcacagggcgtagccgttccccttccccgctcacccttatccaggccgcatcgaacaaa
ccctttgccaccaaacccgtcctcatgtggagcaagcaggacgtggccgactggctcgag
agcctgaacctgggcgagcacagggatgcctttatggacaatgatatcgagggcagccac
ttgcccaacctgcaaaaggaggatctgatcgacttgggcgtgactcgtgtgggtcacaga
atgaacatcgagcgagcgctgaaagtcctcttggacagatga
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integrated database retrieval system
