Labeo rohita (rohu): 127156495
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Entry
127156495 CDS
T09007
Symbol
ckap5
Name
(RefSeq) LOW QUALITY PROTEIN: cytoskeleton-associated protein 5
KO
K16803
cytoskeleton-associated protein 5
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127156495 (ckap5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127156495 (ckap5)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127156495 (ckap5)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
XMAP215
127156495 (ckap5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XMAP215_CLASP_TOG
CLASP_N
CEP104-like_TOG
HEAT
HEAT_EF3_N
TOR1L1_N
Cnd1
HEAT_ECM29
TAN
Htt_N-HEAT_1
Spectrin_2
ParcG
DUF1071
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
127156495
NCBI-ProteinID:
XP_050955337
LinkDB
All DBs
Position
25:17487900..17518602
Genome browser
AA seq
2009 aa
AA seq
DB search
MGDDSEWMKLPIDQKCEHKIWKARLNGYEEALKLFQRIEDEKSPEWGKYLGLIKKFVTES
NAVAQLKGLEAALAFIENAHVAGKTTGEVVSGVVCKVFNQPKARAKELGTDICLMYIEIE
KAEVVQDELIKGLDNKNPKIVVACIETLRKALCEFGSKIITLKPVVKVLPKLFESREKAV
RDEAKLLAVEIYRWIRDALRTPLQNINSVQLKELEEEWVKLPTAAPKQTRFLRSQQDLKA
KFEQQQAAGDEADGDDDDDAADAPQVDPYELLEAVEILSKLPKDFYEKIEAKKWQERKEA
LEAVEALAKNPKLEAGDYGDLVRALKKVIGKDANVMLVAMAAKCLAGLAAGLRKKFGTYA
GHVVPTILEKFKEKKPQVVQALQEAIDAVFLTTTLQNISEDVLAVMDNKNPSIKQQASLF
LARSFRHCTLSTLPKSVLKPFCAAFLKQVNDSAPEVRDAAFEALGTAMKVIGEKAVNPFL
ADVDKLKLDKIKECADKVELVGKKGGGGGGGGGEKKEKPAAKAPPPVEAPAKPSGPPKKA
PPAKAAGPPKKGKPASAPSAKSKKAPDTKDIVETELSPEVCEEKAAAVLPASCMQLLDSA
NWKERLASMEEFQRAVEQMDKSEMPCQALVKMLAKKPGWKETNFQVMQMKLHIVGLIAQK
GSFSKTSALVVLDGLVDKIGDVKCGSNAKEALTAIGEACSLPWTAEQVVSMAFAQKNPKN
QAETLNWLANAMKEFGFAGINVKAFINNVKTALGATNPAVRTSAIALLGVMYLYMGAPLR
MFFEDEKPALLSQIDAEFEKMQGQSPPAPTRGTKKAGADEEGDAAEEEEVDGGAGDIMDL
LPRTDISNKITSHMVSSISDKNWKIRKEGLDEVAAVISEAKFIQANIGELPMALKGRLND
SNKLLVQQTLNILQQIATAMGPSLKQHVKNLGIPIITVLGDSKPNVRAAALTTLNAWVEQ
TGMKEWLEGEDLSEELKKENPFLRQELLGWLSEKLPTLRTVPADLMLCVPNLYTCLEDRS
GDVRKKAQDALPTFMMHLGYEKMTKATSKLKPASKDQVVGMLEKARAVMPAKPAAPAKAA
ASKPASSAPAAKPAAAPARNQSPSEDFSEPEPKPDTKKAKPAGPAAKKGVVGKKPPVKAG
AKDEEDKSGPIFIFVPNGKEQRIKEEKTLKILKWNFITPRDEYVEQLKAQMSTCLAKWLQ
DELFHFDFQRHVKAIGTMIERMEQECEAVIGCLDLILKWFTLRFFDTNTSVLMKALEFLK
LLFTMLSRKNYQLSDYEASSFIPYLILKVGESKDVVRKDVRAILTMLCKVYAASKVFPFL
MEGTKSKNSKQRSECLDELGCLIENFGMNVCQPTPAKALKEIAVHIGDRDTTVRNAALNT
VVAAYNACGDQVFKLIGNLSEKEMSMLEERIKRSAKKTPAASAKQERPQREHPTNPNATF
LRKPAQEEVPNKLKQARAQNAHLEQSAPSIPKEFQLDLDVFENNHTCASDIPDLVQHKLD
DVLEPVMIPERKIRSVSPHFDDIHNSTASTINFVISQVASGDINTSIQALAQIDEVLRQA
DKAEAMSGHIDQFLIATFMQLRLIYNTHMADDRLDKEDIFKLYSCIIGNMLSLFSMESLA
REASMGVLKDLMHGLITLMLDSRVEDIEDGQQLIRSVNLLVVRVLEKSDQTNILSALLVL
LQDSLISTAGSPMFSELVMKCLWRMIRFLPQTINSINLDRILLDVHNFMKVFPKEKLKQL
KSDVPHRTLKTLLHTLCKLTGAKILDHMSMIENRNESELEAHLRRVVKHSANLSGFKSDK
STEKGALRSDDKVIKAKVSDILSEIFKKIGSKENTKEGLTELYEYKQKYSDADLEPFLRN
TSQFFQSYVERGLRMIESEREGKGRIQTSTVIPQHSTDSYLPSSSTVPISSNGEDLNAAA
YYERLKILRQRRGLENSTPEEDRPPLSSLRPSVASSTDMLHSKLSQLKESREHFQQDQSH
SHSPTRSSSPASNLDDLKKRLERIKSNRQ
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgacagtgaatggatgaagttacccatcgaccagaaatgtgaacacaagatt
tggaaagcgagattaaatggatacgaggaagcgttgaagctcttccagaggatagaagat
gagaagagcccagaatggggcaaataccttggacttatcaagaaatttgtaacagaatca
aatgccgtagcccaactcaaaggactggaggcagcgcttgcttttatcgagaatgcacac
gtggctggcaagacaacaggggaagtggtttctggagtggtctgcaaagtcttcaaccag
cctaaagcgcgagccaaggagctgggcacagatatctgcctcatgtacatagagattgag
aaagcagaggtggtccaggatgagctgatcaaaggactggataacaaaaaccccaagatt
gttgttgcttgcattgagactctaaggaaagcactttgtgaatttggatcgaagatcata
actctcaagcctgtggtgaaagtgttgccaaaactgtttgagtctcgagaaaaggcagtt
cgagacgaggccaaattgctggcggtggagatctatagatggatccgagatgctctgcga
actccacttcagaatatcaactctgtacagttgaaagagttggaggaagaatgggtgaaa
ctgccaactgcagctcctaagcagaccaggttcttgcgctctcagcaagacctcaaggcc
aagtttgagcaacagcaggctgcaggagatgaggcggacggagacgacgatgatgatgct
gctgacgctcctcaggtggatccttatgaacttttggaagccgttgagatcctgtctaaa
cttcctaaagacttctatgagaaaattgaagcgaaaaaatggcaggagaggaaggaagct
ttggaggcagtggaggctttggctaagaacccaaaactggaagctggagactatggggac
ttggttcgggcgctaaaaaaggtgattgggaaagatgccaatgtgatgttagtggccatg
gcagccaaatgcttggctggactggcagcaggattgaggaagaagtttgggacatatgca
ggtcatgtggtgccaaccatcttggagaagttcaaggagaagaaacctcaggtggttcag
gccttgcaagaggccattgatgcagtcttccttactacaaccttgcaaaacatcagtgag
gatgttctggcagtgatggacaacaagaatccctctatcaagcaacaggcttcactgttc
ctcgccagaagcttccgtcactgcaccctgagcacattgccaaaaagcgttttgaagccc
ttctgtgcagcattcctcaagcaagtgaatgattctgctccagaagtcagagatgctgct
tttgaggctttggggacggccatgaaggtgatcggggagaaagcggtcaacccattcctg
gctgatgttgacaaactcaagttggacaagattaaagaatgtgctgataaagtcgagctt
gttggtaagaaaggaggcggcggaggtggtggtggaggagagaagaaagagaaacctgct
gcaaaagcacctccacctgttgaagcacctgccaaaccatcagggcctcctaagaaagct
cctcctgcaaaggctgcaggacctcccaagaaaggcaaacctgcctcagctccgagtgca
aagtccaagaaagctccagacacaaaggatattgttgaaacagagttatctccggaagtg
tgcgaggagaaagctgccgctgtgctcccagcctcctgtatgcagctgctggacagcgct
aattggaaggagagacttgctagcatggaggagtttcagagggctgtggagcagatggac
aaatctgaaatgccatgccaggctttagtcaagatgctggctaagaaacctggatggaaa
gagaccaactttcaggtcatgcaaatgaagctccacattgtgggtttaatcgcacaaaag
ggatcattctcaaagacatccgcactggtggttttggatggtctggttgataagattgga
gatgtgaagtgtggaagtaacgctaaagaggctctcactgcgatcggagaggcctgttct
ctgccgtggactgctgaacaggttgtctcaatggctttcgctcagaaaaatcctaaaaac
caagcagagacattgaactggttggccaatgccatgaaggagtttggatttgcaggaata
aatgtcaaggcgttcatcaacaacgtcaaaaccgctctgggtgccacaaatcctgctgtg
aggacatcagcaatcgctttgttgggagtcatgtatctgtacatgggcgctcccctgcga
atgttctttgaagatgaaaaaccagccctcctttcacaaattgatgctgagtttgaaaag
atgcagggtcagtctcctcccgcccccacccgtggcaccaaaaaagcaggagcggatgag
gagggagatgctgctgaagaggaggaggtggacggtggagctggagacatcatggacctg
ttgcccagaactgatatcagtaataaaatcacgtcacacatggtgtccagtatcagcgac
aagaactggaagatcaggaaggaggggcttgatgaggtggcagccgtcatttctgaggcc
aaattcatccaggctaacatcggcgagctgccgatggcactgaagggccgtctcaacgat
tccaacaaactactggtccagcagactctaaatattctgcagcagatagccactgccatg
ggtccatctctcaagcagcacgtcaagaacctgggaattccaatcattactgttcttggt
gacagcaagcctaatgtccgtgctgctgccttgacaacactgaacgcatgggtggagcag
actggaatgaaggagtggcttgaaggagaggacctgtcagaggagctcaagaaggaaaac
cccttcctcagacaggagctgctgggatggctttctgagaagctgcccacgctccgtacg
gtgcctgcggacctcatgctgtgtgtgcctaacctgtacacctgcctggaggaccgaagc
ggagacgtgcgcaagaaagctcaagatgcacttcctaccttcatgatgcacctgggctac
gagaagatgaccaaggctaccagcaaactgaagccggcctcaaaggaccaggtggttggc
atgctggagaaggccagggccgtgatgccagccaagcctgcagctcctgccaaagctgca
gcttccaaacccgcctccagcgcccctgctgccaaaccagccgcagctccagccaggaac
caaagtcccagtgaagatttcagtgaaccagaacccaaaccagacactaagaaagctaaa
ccagcaggtcctgcggctaaaaagggtgttgtgggtaagaaacctccagttaaggctggt
gcaaaggatgaagaggacaaatctggtcccatcttcatctttgttcccaatgggaaagag
cagaggatcaaggaagagaagacactgaagattctcaagtggaacttcatcactcctcgt
gatgagtacgtggagcagctgaaggctcaaatgtccacatgtctggccaagtggctccaa
gatgaacttttccactttgactttcagcgccacgtaaaagctattggaaccatgattgag
cgcatggagcaagagtgtgaagctgtgattggctgtctagatctgatattgaagtggttc
accttgcgattctttgacacaaacaccagtgtgttgatgaaggccttggagttcctcaag
ctgctcttcaccatgctgagcaggaagaactaccagctcagtgactacgaggcctcatct
ttcatcccctacctgatcctcaaggttggagagtcgaaagatgtggtgcgtaaagacgtc
agagctattctgacaatgctgtgtaaagtctacgcagccagtaaagtcttccccttcctt
atggaagggaccaaatcaaagaactcaaagcagagatctgaatgtcttgatgagctcggc
tgcctgattgagaacttcggtatgaatgtgtgccagccgactccagccaaggctctcaaa
gaaatcgctgttcacattggagaccgtgacactacagtccgcaacgctgcgcttaacaca
gtcgtggctgcctacaacgcctgtggagatcaagtcttcaagctcattggcaatctgtct
gagaaagaaatgagcatgctggaagagcgaatcaaacgttcggccaagaagacgcccgca
gcctccgccaaacaggagcgacctcagagagagcatcctaccaatcccaacgcaaccttc
ctgcgcaagcctgctcaagaggaagtgcccaacaagctcaaacaagctcgggcgcagaac
gctcacttggagcagtcggctccgtccatcccaaaagagtttcagctggatctcgacgtg
ttcgagaacaaccacacatgtgccagcgatatccctgacctggtgcagcacaaactggac
gacgttttggagccggtcatgattcctgagcgcaagattcgttcggtctctcctcatttt
gatgacattcacaacagcactgcctccaccatcaactttgtcatctcccaggtggccagt
ggggacattaacaccagtatccaggccttggcacagattgatgaggtcttgaggcaggca
gacaaagcggaagcaatgtccggacacatcgaccagttcctcatcgccaccttcatgcag
ctgcggctaatttacaacacacacatggctgacgatcggctggacaaggaggacatcttc
aaactctacagctgcatcataggaaacatgctttctttgttctcgatggagagtctggcg
cgggaggcctccatgggcgtcctgaaggacctgatgcacggtctgatcacgttgatgttg
gactccagagtggaggacatcgaggatggacagcagctcattcgctccgtcaacctgctt
gtggttcgagtgctggagaaatccgatcagactaacatcctaagtgctttgctggtgctg
ctgcaggacagtcttatcagcaccgccggctcccccatgttctctgaacttgtcatgaag
tgtctatggagaatgatccgtttcctgccgcagaccatcaacagtattaatctggaccgc
atcctgctggacgtgcacaacttcatgaaggttttccctaaagaaaagctcaaacagctg
aagagtgacgttccccaccggacgctaaagacgctgctgcacacactctgcaagctcact
ggcgccaagatattagatcacatgtccatgattgagaaccgcaatgagtctgaactagag
gcacatctaaggcgggtggtcaagcattcggcaaacctctccggattcaagtccgacaag
agcacagaaaagggcgccctcagatcggatgacaaagtgatcaaagccaaagtgagcgac
atcctgtctgagatcttcaaaaagatcggctccaaggagaatactaaagagggtctgacg
gagctgtatgaatacaagcagaagtactctgacgcagaccttgagcccttcttgaggaac
acgtcccagttcttccagagttacgtggagcgaggactccgcatgattgagtcagagcgt
gaaggaaaaggcagaatccagacctccacagtaatccctcagcacagcacagactcgtat
ttgccgagctccagcaccgtgcccatcagcagtaatggagaagatctgaacgctgccgcc
tactacgagagactgaagatcttgcggcaacggcgcggccttgagaactcaacgccggag
gaagaccgacctcctctcagctccctgagaccgtcggtggcctcctccacagacatgctc
cacagcaaactgtcccagctgaaggagtcccgcgagcacttccagcaggaccagtcccac
tcccacagccccacccgctcctcctcccccgcctccaacctcgacgacctcaagaagagg
ctggagaggataaagagcaaccgccagtag
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integrated database retrieval system
