Labeo rohita (rohu): 127156512
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Entry
127156512 CDS
T09007
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127156512
04121 Ubiquitin system [BR:
lroh04121
]
127156512
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127156512
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127156512
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
zf-BED
Motif
Other DBs
NCBI-GeneID:
127156512
NCBI-ProteinID:
XP_050955354
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All DBs
Position
25:complement(29247850..29250197)
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AA seq
566 aa
AA seq
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MECHKVVATKHGNTTNLSDHLKRHHKALYDEYKAKSGCQPKQTNICDAFASVTPYQKGSQ
RQKEITDAITFHIAKDMLPLNTVAKEGFKKMIRTLDRRYVIPSRTYFSQVAIKELYEKCK
SKIEAELSHVEYYATTTDLWSSRTTEPYMSLTVHFITEDFELKSRCLQTAFFPESHTAEN
IAEALREAVSAWGLDETRQVCITTDNAANMVKAADLNKWTRLQCFGHRLHLAIENAVKKD
GRIDRAIGVCKKLVSHFSHSWKASDALAKVQKELSLPSHCLISECQTRWGSRQMMISRIL
EQQQALTQVLSADKKLRHLIPTWQDIDVLESVSKSLGPMLDFTDALSGDEYVSVSFVKPV
LQLFNTSLLEMREEDTDLTKNIKKKMLDYLNEKYEDDDTQKLLDMASFLDPRFKMDFISA
DKKTQVKATVASQMMECQEKSSCSTDVEPNVTSATQAKKAKKSLGSFFKQRETEAKGDSS
LTLKDALEAELNTYLLTPPIDKEEDPLAWWKVHKLSFPHLARLARKYLCIPATSSPSERL
FSTSGNIVTCHLSLVSSLQRLIDLCS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtcataaagttgtggccacaaaacatggaaacacaaccaatttgtctgatcac
ttaaaacggcaccacaaagctctttacgacgaatacaaagccaaatctggatgtcaacca
aaacaaacaaatatttgtgatgcatttgccagtgtgacaccttaccagaaaggttctcaa
cgacaaaaagaaataacagacgcaataacttttcatatcgctaaagatatgttgccatta
aataccgtcgccaaagagggatttaagaaaatgatccgaacgcttgacaggcggtatgtt
ataccatcccgcacatatttttcccaagttgcgataaaagagctgtatgaaaaatgcaaa
tctaagattgaagcagaactgtcgcacgtggaatactatgcaactacaacagacttgtgg
tccagcaggacaacggagccctacatgagtctgacggtccatttcatcacagaggacttc
gagctaaaaagtcgctgtttgcagacggcatttttcccggaaagtcatacagccgagaat
attgcagaggccctgagagaagcggtgtccgcttggggtttagatgagacacgtcaagtc
tgtataacaacagataatgcagcgaacatggtcaaagctgccgatctgaacaagtggacc
aggctacagtgcttcggccacagactgcatcttgcaattgaaaatgcagtgaaaaaggat
ggccgcattgatcgtgctataggagtctgcaagaagctggtgagccacttctctcacagc
tggaaggccagcgacgccctagcaaaagtccagaaggaactcagtctaccatcacattgt
ctcatctcagaatgccaaacaagatggggttccagacagatgatgatcagcaggatatta
gagcagcagcaggctttaactcaggtcctgtctgcagacaagaagctgcggcatctaatt
ccaacctggcaagatatagatgtgctggaatctgtaagcaagtcactgggcccaatgctg
gatttcactgatgcactttcaggggatgaatacgtcagtgtctcctttgtaaagccagtt
cttcagctcttcaacacttcactactggaaatgcgagaagaagacacagacctgaccaag
aacataaaaaagaagatgctggactacctcaatgagaaatacgaagatgatgatactcag
aagctgctagatatggcatcttttttggacccccggttcaagatggacttcatcagtgca
gacaagaagacccaagttaaggccacagtggcatcacagatgatggaatgccaggagaaa
tcaagctgcagcactgatgtggagcccaacgttaccagtgcaacccaggcaaagaaagca
aagaagtcactgggaagcttctttaaacagagagaaactgaagcaaagggtgattcctct
ctgaccctaaaggatgctttggaagcagagttaaacacttacctgctaacacctccaata
gacaaagaggaggatccacttgcatggtggaaagtacacaaactaagctttcctcatctc
gccagacttgcccgcaaatacctgtgtattcctgcgacaagctcgccgtcagagagactt
tttagtactagtggcaacatcgtcacttgccacttgtcacttgtctcaagcctgcaaagg
ttgatagacttgtgttcttag
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