Labeo rohita (rohu): 127156549
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Entry
127156549 CDS
T09007
Symbol
rpgrip1l
Name
(RefSeq) protein fantom
KO
K16550
protein fantom
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lroh01009
]
127156549 (rpgrip1l)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127156549 (rpgrip1l)
Protein phosphatases and associated proteins [BR:
lroh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127156549 (rpgrip1l)
Cilium and associated proteins [BR:
lroh03037
]
Primary cilia and associated proteins
MKS complex
127156549 (rpgrip1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
Motif
Other DBs
NCBI-GeneID:
127156549
NCBI-ProteinID:
XP_050955431
LinkDB
All DBs
Position
25:1117254..1147073
Genome browser
AA seq
1272 aa
AA seq
DB search
MMFARADETAGDIPVKDITLNPNGATLPEALLSQNIRERQNVSKFSREELEDKFLRLQDE
NLTLKQHTCKQEDKIRRMATKLIRLVKDRKQSEGGRVVGGRDVEMEEMMEELQEKVQELE
KQNEGLKRRLLAAKQQLQVQNRRHTPYSHIQPRINSGLRRLRDDMPMTSSRPHTPKTGIR
HVEGDMSAKPPQGLLPRYGHSLLDEARAEIRNLENVIESQQVQMEEMERSAEMLRDQLKR
KEREFDESLLQMREHQASGQRLTIKDNVEMIKLQKLLSEKANTLTVLEGRFLQQQESMKT
LKASHDAALVKVDEVSRQLKEERLKSLQLETQIQTRALDQRHSQELQERIQDLEKERDLL
KENCDKLVKSAFDVSQEHKWKTREQQLKLQVAQLETALKSDLADKNQILDKIKAERDLNE
KLVQENKELQLRYLEQKQQLDEIKERMKFFTKESEIDAAELSEALMLIKVRRSQKSGELG
FLEKVEEDVKVDVERSFRELQATHAETIQELEKTRNMLIIQHKINKDYQAEVEAVTRTMD
DLKLEYELKSEKLAQLLDMRAAKIKKLEAQLKDIAYGTKTHVFRPDVTSDDVTDEFDETL
SLARGENLLEIHLGKAQFSPEAVEYLKDKDLSTFCTYAFYDFELQSTPVVRGVRPAYSLT
SQYLVRVDDLFLNYLHTSSVTVEVQLAEGLSFRTVAAGQLRLKQLLERDGKVFGTIQLVG
VTDEIQVFGTLEYWLKLRVPMEQAIRLYKERVKALGYLNTSMRDSQALSVPVPSSSSLMD
GDLNELNVTIHSCCSLKSRGLHTQPSPYVIYKLYDFPDHDTPVISSTNEPQFEDHMIFPV
AMNSDFDAFLRSEALVLYVFDDLDVENQLYLGKAKVPLVSLAHDKKITGMFELTDPAGLP
SGQISVTLKWKFTYLPPTTSTITTQQTKITGRTTPERQTSQDKEKTQTETQQMIKHPPLI
PQPTVSETPMPKPRQRTLPKSTTKRVSFVDVTELEKQMEQTAASDEGDNEEPKSSVIPAP
KTVIVMEAGEATAVSEEEDEEESHFSEGQVITASSQSDESEISEELQEPLTDVQGEDDDS
DDCIVPAQSSQQKKQPSECIRVEIVSLSLKPGSRVAEDSGIVRLFVEYCFLGLPSVETPL
SLKKPLPGHSVSYNFSNVIHVDKESNQPRRQTLRAVLEGRNRQLEHLKFTVVSDPPEEEE
QDEECEDVGVAYLRIVDIMEKRRDMKDVSLNIVDVQDSSEVIGHLVVTVEALEALTSILK
DPERDRPLTTLA
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttgctcgtgctgatgagacagctggtgatattcctgtgaaagacatcactctc
aacccaaatggagccacattgcctgaggctttgctgtctcagaatatcagagagaggcag
aatgtgtccaagttcagcagggaggagctggaggacaaatttctacggctgcaggatgaa
aacctcacacttaaacaacatacatgcaaacaagaagacaagatccgcaggatggctacc
aagttgattcgtctggtgaaggaccgtaagcagagtgaggggggtcgagtagtgggtggt
cgggatgttgagatggaggagatgatggaggagctgcaggagaaggttcaggagctggag
aaacagaacgaagggctcaagcggcgactgttagcagccaaacagcagctgcaggtgcaa
aaccgccggcacactccctacagtcacatccaaccgcgcatcaactccggcctccgcaga
ctcagagacgatatgcccatgacatcatctcgaccgcacactcccaaaacaggtatcagg
catgttgaaggggacatgagtgcaaaaccaccccaaggtttgttgccccgctatggacac
agtctgctggatgaggcccgtgctgaaatccgcaacctagagaatgtgattgagagccag
caagttcagatggaggagatggagagatcagcagagatgctgagagatcaactgaagagg
aaagagagagagtttgatgaatcactccttcagatgagagagcatcaggccagcggacag
aggttaactataaaggataatgtggagatgatcaaactgcagaagctgttatctgagaaa
gcaaacacactcacagtgctggagggccgatttctacaacaacaggagagtatgaagact
ctgaaggctagtcatgatgcagcactggtgaaggtggacgaagtgagcagacagctgaag
gaggagagactgaagagtttacagctggagacacagattcagaccagagctctggaccag
agacactcacaagagttacaagagagaatccaagatttggaaaaggagagagacttgctc
aaggaaaactgtgataaattagtgaaaagtgcgtttgatgtgagtcaggagcacaaatgg
aagacgagagaacagcagctcaaactacaggtcgcccagctggagacggctttaaaatcc
gacctcgctgataaaaaccaaatcctggataagatcaaggcagagagagatttaaatgaa
aagctggtgcaagaaaacaaggagcttcagctgcgttaccttgagcagaaacaacaactg
gatgaaattaaagagcgcatgaagttctttaccaaggaaagtgaaatagatgcagctgaa
ctcagtgaagccctcatgcttataaaggttcgtaggagtcagaagagtggagagcttgga
tttctggagaaggttgaggaagatgtgaaagtagatgtggagcgatctttcagggaactg
caggccactcatgctgagaccattcaagagctggagaagaccaggaacatgctcatcatc
caacacaagatcaataaagactatcaggcagaggttgaagcagtcactcgcacgatggac
gatctgaaacttgaatatgagctgaagtcggagaagctggctcagctactggacatgaga
gctgccaagataaagaaacttgaagcccagctgaaagacattgcatatggaaccaagacc
catgtattcagacctgatgtgaccagtgatgacgttacagatgagtttgatgaaaccctt
agcttggctcgaggcgagaaccttctggaaattcacttggggaaagcacagttctctcct
gaagctgtagaatatctgaaggacaaagatctgtccactttctgcacatacgccttctac
gactttgagctgcagtctacacctgtggttcgaggggtccgtccagcgtatagtctcacg
tctcagtatcttgtgagggtggacgatctcttcttgaactatctccacaccagctcagtt
acggtggaggttcaactcgctgagggcttgagcttccgcacggtggctgctggtcagctc
aggttaaaacagctgctggaacgagatggaaaggtgtttggcaccattcagttagttggt
gttacagatgagatccaggtgtttggtactctggagtactggctcaaactcagggttcca
atggaacaagccattcgcctttataaggagagagtcaaagcgcttggttacctcaacaca
agcatgagggacagccaggctttatcggttcctgtccctagttcctcatcattgatggat
ggtgatctaaatgaactaaatgtcaccatacactcctgctgtagtcttaaatccagaggt
cttcacactcaacccagcccatatgtcatctacaaactctacgacttccctgaccatgac
acgccagtcatatcctccaccaatgagccgcagtttgaagatcacatgatcttcccagtg
gctatgaactctgattttgatgcgttccttaggtcagaggctctagtgttgtatgtgttt
gatgatttggatgttgagaaccagctgtacctggggaaggccaaagtaccacttgtgtcg
ctggcgcacgataaaaaaatcactggtatgtttgagcttacagaccctgcaggtctcccc
agcggccaaatcagtgtgactttgaaatggaagttcacataccttcctccaacaacctcg
actatcaccacacaacagaccaagatcaccggcagaacgacgccagagagacagacgtcc
caagacaaggagaaaacacagacagagacacaacagatgatcaaacatcctccactaata
cctcaacccactgtttctgagactccaatgcccaaacccaggcagcgaactttaccaaaa
tcaactactaaaagagtttcttttgtggatgttacagagcttgaaaaacagatggagcag
actgcagcctctgatgaaggtgataatgaagagccgaaatcatctgtgatccctgcacca
aagactgtcatagtgatggaagcaggagaggccactgcagtcagtgaggaagaggatgag
gaagagtctcatttctctgagggtcaggtgatcaccgccagctctcagtctgatgagtct
gagatttctgaggagctgcaagagccactaacagacgttcagggtgaggatgatgatagc
gatgactgcatcgttcctgctcagagctcacagcagaaaaaacagccgtccgagtgcatt
cgtgtggagatcgtttctctgagtctgaagccgggctcaagagtggcagaagacagtgga
atcgtccgactgtttgtggaatactgtttcctgggcctgccatcagttgagacaccgctg
tccctaaagaaacctcttcctggacacagcgtctcctacaacttcagcaatgtgatccat
gtggataaggaaagtaaccagcccagacggcaaactttgagggcggtgctggagggccgg
aacagacaactagaacacttaaagttcacggtggtgagcgaccctcctgaagaggaggag
caggacgaggaatgcgaggatgtgggcgtggcctacctgcgtattgttgatatcatggaa
aaacgcagagacatgaaggacgtcagcctcaacattgtggacgttcaggacagcagtgaa
gttattggccatctagttgtgaccgtcgaagctctggaggctctaacatccatcctgaaa
gatccagagcgtgatcgacctctaactacacttgcttaa
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