Labeo rohita (rohu): 127156710
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Entry
127156710 CDS
T09007
Symbol
abcc8
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127156710 (abcc8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127156710 (abcc8)
Transporters [BR:
lroh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
127156710 (abcc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
nSTAND1
AAA_23
DEAD
TMD0_ABC
Motif
Other DBs
NCBI-GeneID:
127156710
NCBI-ProteinID:
XP_050955688
LinkDB
All DBs
Position
25:complement(5810488..5892825)
Genome browser
AA seq
1594 aa
AA seq
DB search
MMITRYRPRPDTTMSLAFCGNDNNSAAYNVDAGVLNNGCFLDALTVVPHVFLLFITFPIL
FIGWGSQSSKVHIHHSTWLHFPGHNLRWILTFILLFIIVCEIAEGIVSDGFNQSVHLHLY
MPSCLAFMAAITSIIYYHNIETSNFPKLLMTLLIYWVLAFVSKTIKFAKYTEHGIGLRQL
RFGITGLLTLLYGLLLAVEINVILRRRYMCFAHPTEVKPPEDLQDLGVRFLQPFVNLLSK
STYWWMNTFITAAHRRPIDLKVIGKLPIAMRALTNYLKLREAFEAQKSPQGIQPQGSKWI
WTALRQAFGRPLLLSITYRFMADLLGFAGPLCISGIVHHLSKENHTIQPPVKHLGIYFIS
SQEFLANAYVLAVLLFFALLLQRTFLQASYYVAIETGINLRGAFQTKIFNKIMRLCTSNM
SMGGMTVGQICNLVAIDTNQLMWFFFLCPNLFAMPVQIIVGIILLYYLLGISALIGATVI
TLLAPVQYFVATKLSDAQKSTLEYSSERLKKTNELLRGIKLLKLYAWEHIFCSSVEETRG
KELTSLQTFALYTSISIFMNTAIPIAAVLVTFVAHVHLSDDADLSPAVAFASLSLFHILV
TPLFLLSSVVRSTVKALVSVQKLSEFFSCDEIGAEQEPRATVLPNSTNHNKYQALPLKVV
NRKRPVREDWNSFALQSEQEDEPLPVEDEDICIKITNGYFSWTDGTPTLSNVNIKIPFGQ
LTMIVGQVGCGKSSLLLAALGEMQKISGTVIWNRLPTLDAEGNESPTDAAADGDIRKRGA
VAYASQKPWLLNTTLAENITFEMPLIKQRYRTVIEACSLQPDIDILPQGDQTEIGERGII
LSGGQRQRIGVARALYQTTNVVFLDDPFSALDIHLSDHLMQEGILKLLREEKRTVVLVTH
KLQYLPHADWIIAMKDGSIQTEGTLKDIQNSQPELFEQWKTLMHRQDKEFEKETVDENMT
VLERKNLRRAMYSREALKTEEEEEEQSAESDEEDNLSRVMRHRATIPWRSCGTYLSSAGL
LLLLLLLLSQLLKHSLLVAIDYWLAHWTSKVITAKIDAAAHNCSLVQDVGFSHSSYLLVF
SLLCCLGIVLCLATSVAVEWTGLRVAKELHHNLLNNIILAPMRLFETTPLASILNRFSSD
TNTIDQHIPATLECLSRSTLLCVSALGVISYVTPVFLIVVAPLAIACYFIQKYFRVASKD
LQQLEDGTQLPLLSHFSETVEGLTTIRAFRYEPRFRQRLLEFTDANNMASLFLTAANRWL
EVRMEYIGACIVLIAAVASITNSLYNHLSTGLVGLGLTYALMVSNYLNWMVRNLADMEVQ
LGAVKKIKALLKTEPENYEGLLSASQVPEGWPQRGEIQIQNLSVRYDSTLKPVLKHVNAH
ISPGQKVGICGRTGSGKSSFSLAFFRMVDTFEGRIIIDDIDIAKLPLQTLRSRFSIILQD
PFLFSGTIRFNLDPEMKATDSMLWEALEIAQLKPVVKTLPGGLDAIITEGGENFSQGQRQ
LFCLARAFVRKSSILIMDEATASIDMATESILQKVVMTAFADRTVVTIAHRVHTILNADL
VIVMKRGVILEFDKPQVLLNQEDSVFASFVRADK
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcacacgctacagaccgagacccgataccaccatgtccttggcgttctgcggc
aacgacaacaactcggccgcgtacaacgtggatgctggtgtcctcaacaacggctgcttc
ctggacgccctcacggtggtgccgcatgtcttcctgcttttcatcacttttcctatcctc
ttcatcggttgggggagtcagagctccaaggtgcacatccatcacagcacttggctgcac
ttccctggacacaacctccgctggatcctcaccttcatcctgctcttcatcatcgtctgc
gaaatagccgaaggcattgtatccgacgggtttaatcagtcggtccacttgcacctttat
atgccatcatgtttggccttcatggctgccatcacatcaatcatctactaccacaacata
gagacctccaacttccccaaactactgatgactttgctcatttactgggttctggcgttt
gtctctaaaacgatcaagtttgccaagtacacagagcacggcatcgggctgagacagctg
cgcttcgggatcacaggcttactgaccctgctatatggcctgctgttggccgtggaaatc
aacgtcatcctgaggaggcgctatatgtgttttgcacaccccactgaagtgaagccccca
gaggatttacaggacctgggagttcggttcctgcagccgtttgtgaacctgctgtccaaa
agcacatactggtggatgaacacctttatcactgcagcacacagacgccccatcgatctg
aaggtcattggcaagctaccaatcgcaatgagagctctaactaactacctgaagctccgc
gaggcctttgaagcccagaagagtcctcaaggcattcagccgcaggggtccaagtggatc
tggacggctctgcgacaggcctttggaagacctcttctgctcagcattacctaccgtttc
atggcggatctgcttggctttgccggaccgctctgcatctcaggcatcgtgcaccacctc
agtaaagagaaccacaccattcagccaccggtgaagcatcttggaatctatttcatctcc
tctcaagagtttctcgctaatgcttacgtccttgccgtgctgctgttctttgctctgctc
ctccagaggactttcctccaggcctcctactatgttgccattgagactggaatcaacctg
agaggagcatttcagacaaagatcttcaataaaataatgcgtctctgcacctccaacatg
tccatggggggaatgacagtgggccagatctgcaacctcgtcgctatagataccaaccag
ctgatgtggttctttttcctgtgccccaacctgttcgcaatgccagttcagatcatagta
ggaatcatcctcctttactacctcctgggaataagtgccttgataggggccacggtcatc
accctcctggctccggtgcagtacttcgtggcgaccaagttatcagacgcacagaaaagc
acattggaatattccagcgaacggctgaagaagaccaatgaattgctgcggggcatcaag
ctcttgaagctgtacgcctgggagcacatcttctgctcgagcgtggaggagacccggggg
aaagaactcaccagcctgcagacctttgccctctacacctccatatccatattcatgaac
acagctattcccatcgcagcagtcctcgttacattcgtggctcatgttcatctgtcggat
gatgcagatctgtctccagctgtggccttcgcttctctctcgctcttccatatcctggtc
actcctctcttcctgctgtccagcgtcgtccgctccaccgtcaaagccctggttagtgtt
cagaagctcagcgagtttttctcctgtgatgagattggagctgaacaggagcccagagca
actgtcctgcccaattcaaccaatcacaacaagtatcaggctctgcctctgaaggtggtg
aaccgtaagcggccagtcagagaggactggaacagcttcgcccttcagagcgagcaggaa
gacgagccgctgccggtggaggatgaagatatctgcatcaagattacaaatggatatttc
agctggactgatggaaccccaacactgtccaatgtgaatattaagattccctttggtcag
ttaactatgattgtgggccaggtgggttgtgggaaatcatctctgttgttggctgctctg
ggcgagatgcagaagatttctggcactgttatatggaacagactgccaactctggatgca
gaaggaaatgaaagccccacagatgcagccgcagatggagatatcaggaaaagaggtgct
gtggcatacgcttcccagaagccctggctcctaaacaccacgctagcggagaacatcact
tttgagatgcctttaataaaacaaaggtacagaacggtaattgaagcatgttctctccag
ccggacattgacatcctgccccagggggaccagacggagatcggagagcggggcattatt
ctttctggaggccagaggcagcgaattggcgtcgctcgggctctttatcaaaccaccaat
gtggtgttcctggatgatccgttctcagcgctggacattcatctgagtgatcacctaatg
caggagggcattcttaaactattaagggaggagaagaggacagtggtgcttgtgacacac
aaactacagtatctcccacatgcagattggatcattgcaatgaaggatggcagcatacag
acagaagggacgttaaaggacatccagaattctcagcctgagctcttcgagcagtggaag
actctgatgcacagacaagacaaggaatttgagaaggagacagtagatgagaatatgacg
gtgctggaaagaaaaaacttgaggcgagccatgtactccagagaggctttgaagactgag
gaggaagaggaagaacagtctgcggagagcgatgaagaagataacctgtctcgagtgatg
aggcacagagccaccatcccatggagatcctgtgggacgtacctgagctcagcaggcctc
ctcctgcttctcctgctcctgctgtcccagctgctcaaacactctcttttggtggccatc
gactactggctcgctcactggacgtccaaagtcatcacagccaaaatcgatgcagctgca
cacaactgctccctagtgcaggatgttggttttagtcactcgtcatacctgctggtgttc
agtctgctgtgctgtctgggtatcgtactctgtctggccacatcagtggcggtggagtgg
acaggcctccgggtggcaaaagaactgcaccacaatctgctcaataatattatccttgcc
ccaatgagactctttgaaaccactcctttagcaagcatattaaaccgcttctcttctgat
accaatacgatagatcagcacattcccgccactctggagtgtttgagtcgctccacgctg
ctgtgtgtgtcagctctaggtgtgatctcgtacgtcacgccagttttcctcatcgtagtc
gcaccgctggccatcgcctgctatttcatccagaaatacttcagagtcgcatcaaaagat
ctccagcaattagaagacggcacacagcttcctctgctctcacatttctctgagacagta
gaggggctcacaaccatcagagcgttcaggtatgagcctagattcagacagagacttcta
gagttcacagatgccaataacatggcctctctcttcctcacagcggccaatcgctggctg
gaggttcgaatggagtacattggggcctgtattgtcttaatagcagctgtggcgtccatc
acaaactccttgtacaatcatctgtcaacggggctggtggggctgggactcacatatgcc
ctcatggtgtctaattatttaaactggatggtgcgtaatctggccgacatggaggtgcag
ttgggagctgtaaagaagataaaagctctgctgaagactgaacctgaaaactacgaaggt
ttgctgtcggcgtctcaggttcctgagggttggcctcagcggggcgagattcagatccag
aatctgagcgtgaggtacgacagcaccctgaagccggtcctcaaacatgtcaatgcccac
atcagcccaggacaaaaggttggaatctgtggcagaacaggaagtggcaagtcgtctttc
tcgctagccttcttccggatggtggacacatttgaagggcgaataatcatcgatgacatc
gatatagcaaagctgcctcttcagacactgaggtcgcgcttctctattattctgcaagat
cccttcttattcagcggaaccatccgttttaatctagatccagagatgaaggctacagac
agcatgctgtgggaggcgttagaaatcgcacaactcaaaccagtagttaaaaccctgcct
ggaggactagatgccataataactgaaggtggggagaacttcagccaggggcagcgtcag
ctgttctgtctggcgcgcgcattcgtgcggaagagcagtattctgattatggacgaggcc
actgcttccatagacatggctacggagagcattctacaaaaagttgttatgactgccttc
gccgacagaactgtggtcaccattgcccatcgtgtgcacaccatcctgaatgcagacctt
gtgattgtgatgaagagaggcgtcattctggagtttgacaagccacaggttctcctcaat
caagaggacagcgtgtttgcgtcgttcgtcagagccgataaataa
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integrated database retrieval system
