Labeo rohita (rohu): 127156745
Help
Entry
127156745 CDS
T09007
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127156745 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127156745 (cnot2)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127156745 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127156745 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
127156745
NCBI-ProteinID:
XP_050955735
LinkDB
All DBs
Position
25:11359919..11375515
Genome browser
AA seq
538 aa
AA seq
DB search
MHFKSTYSLGSCSAVVTNGMFGAQRKKYGMEAVESEFSDESIYYNQQSMFPHRPEKDMLP
SPSPSSQLSQLGASLYGPQSALGFSLRGMSNNNPQLNRSLTQGTQLPSHSTPTTGVPTMS
LHTPPSPNRGILPMNTRNMMSSQVGQGMGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQP
ARQPFTINSMSGFGMGRSQGFGMNSLSNNIFNGTDGSENVTGIDLSEFPALADRSRREGN
GNPTPLHNPLAGRAPYVGMVTKPSNEQSQDFSIHNEDFPALPGPNYKDPTLSTDESKSSL
NSSGKGSSSADGPKFPGDKTSSAQNNNQQKKGIQVLPDGKVTNIPSGMVTDQFGMIGLLT
FIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYL
TNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRA
PGMEPTLKTNTYERGTYYFFDCHNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcaaatcaacatatagccttgggtcttgttctgcagtggtgacaaacggaatg
ttcggtgcacagagaaagaagtatggaatggaggcggtcgaaagtgaattctcagatgag
agcatttactataaccagcagtcaatgttcccgcatcggccggagaaagacatgctgcca
tctccctcgccgtcaagtcaattgtcacaacttggtgcgagtttgtatggtccgcaaagt
gcactaggtttctcattaaggggcatgagcaacaacaaccctcaactgaaccggagttta
acacaaggcactcagttaccgagccatagcaccccaacgacaggcgtcccgacaatgtcc
ctccacacaccaccttcgccgaacaggggcatcctgcctatgaacaccaggaacatgatg
agttcgcaggtagggcagggcatgggcatgagcggcaggaccaacagtatgggcagctct
ggcttgggtagccccaaccgcagctcgcccagcattatctgcatgcccaagcagcagcca
gcacgccagccattcaccatcaacagtatgtcaggatttggaatgggccggagccagggg
tttggcatgaactccttatccaataacatcttcaacgggacagatgggagtgaaaatgtg
acaggaatagacctctcagaattcccagcacttgcagacagaagtcggagggagggaaac
ggcaacccaacaccgttgcataatccgctggctggaagggcaccctatgttggaatggtc
acaaagccatcgaacgaacagtcgcaggacttctccattcacaacgaagacttcccagcc
ctgcccgggcccaactacaaggacccgacattgagcacggatgaaagcaaatcaagcttg
aactcttcaggaaagggcagctcgagtgcggatggacccaagtttcccggcgacaagaca
tcatcagcacagaataacaaccagcaaaagaaggggatccaggtgttgcctgatggcaag
gtaacaaacattccctcaggaatggtgacggatcagtttgggatgattggactcctgaca
ttcatccgggcagctgagacggaccctggcatggttcacctagctttaggaagcgaccta
acaacgctaggactcaacctcaactctccagagaatctatatcctaagtttgcatctcct
tgggcttcagctccatgtcgaccacaagacattgacttccatgttccctcagagtactta
accaacattcacataagggacaagctggctgcaataaaactgggacgatacggtgaagac
ctgctgttttacctctactacatgaacggaggagacctcttacaactcctcgctgccgtt
gaactgttcaaccgggactggcggtaccataaagaggaaagggtttggattacaagagca
cctggcatggagcccacgctaaagaccaacacctacgagagaggaacatactacttcttt
gattgtcataactggaggaaggtcgctaaggagtttcatctggaatacgacaagctagag
gagcggcctcacgtgccaaccaccttcaattacaatccggcccagcaggccttctga
DBGET
integrated database retrieval system
