Labeo rohita (rohu): 127156757
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Entry
127156757 CDS
T09007
Symbol
hps5
Name
(RefSeq) Hermansky-Pudlak syndrome 5 protein
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127156757 (hps5)
Membrane trafficking [BR:
lroh04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
127156757 (hps5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_HPS5
TPR_HPS5
WD40_WDHD1_1st
PEP5_VPS11_N
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_ACSF4
Beta-prop_Vps41
WD40_CDC20-Fz
Beta-prop_IFT140_2nd
Beta-prop_RIG_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
Motif
Other DBs
NCBI-GeneID:
127156757
NCBI-ProteinID:
XP_050955755
LinkDB
All DBs
Position
25:25680407..25706264
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AA seq
1125 aa
AA seq
DB search
MIPVVPVEAGTHVLAEFDCLDPLLSALRLDSGRIKCTCLSVSRKWLALGTSAGGLHLIQR
DGWKQKLILTHKEGSVTQVSCCPHDEDFIAVATSQGLVVVWELHLERRGRPERVSVSWEH
RGQTVTSLCWDTVALRVFVGDIGGKVSCVRAGSSKLGKGSAFVIFPVQTITTVDSRVVQL
GYSDGHLVVSSLSRCYLCDTEREKFWRVGNKERDGEFGACFFLQGPAGQRGQALLYCARP
GSRIWEASFSGEVLSTHQFKQLLACPPLPLISYKDEPHFNPTQTSPQSLAFPRLLQFGDQ
NLLTWTDSAIYIFTPHSGQVLLWTEVKDVVEISVFRNELFCLHGDGRLSHLSLMSPERCV
ERLMKRENWTFAATVCCMFQHAIITSRARKSLPIDRLEQLKAQLNSASQQQLIGQLEEVI
SKLEPLDSACSSRRSSISSHESFNVLDCGIYRVISRRGSQSDDDASSLTNQSMLEEERLR
EFSFTEEEQVENDSQSVRGEGDRSDLSLQFLPLPFRSKPPRVALQAVRDSVSSFVKKTTE
KINTLQMNADLWPRPDLREGVQGEVTATVTPLPEEVEHELNAEQSSAESELQELRAATKK
AISQIQDPMVLLDPICLSNVLQEWAPVLERVLGPEDHTRLEEITTQEDKTLEEEELVSSM
SCCVVVQPDIYSPNLDESATLTEEEDLGESIPCSTAPVRAFPLLANHVELIQLFSPKPLP
PDLQADLSQLACLYLEMGCPGRGGVENVCVFLRRYFFLLDQERVRKMCMLRYREHREVMK
AYIAGMLEFTQASKVVEVIQKGDLLKSLRSLRELQPWNAPLLLSHLYRLYDKHGEVAVRA
YPQFYPTILPSDIMAMALPSHFLPYLDNLVQSRAEQQRLSFLGSLLQPETLRQDWLELAL
SHDAPQKDDTLTPDGQPRWRSHFFSWGYGRLLSLLIRLPADLASKQKMLEMCRTHGYWMG
YLYLCRELQRRPEAFSAICRLDDMTLLEGDDGIVPQSLDEWVLLLQLSQQISSSTEAPST
SALPSSPNGSCSDDTNGTSNSSPDLSDGSTDWNIRISPENIILHLVRVFGPDQALTALQE
RGIQVDLSSHSTLVCELLRMAEKRQRALIQTMLERCDRFLWSQHA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtggttcctgtggaggccggcactcatgtcctggcagagtttgactgtctg
gacccccttctttccgcactgcggctggattcgggacgaatcaaatgcacatgtctctcc
gtgtccaggaagtggctggctctgggcacgtctgccggaggccttcacctcattcagaga
gatggctggaagcagaaactcattctcacacacaaagaaggctcagtcacgcaggtctca
tgctgcccccatgatgaagactttatcgctgtagcaacaagtcagggtttggtggtggtg
tgggagctgcatttggagcggcgtggccgccctgagcgcgtctctgtgtcctgggagcac
cgtggacagacagtaacatctctgtgctgggacaccgtggcactaagagtgtttgtcgga
gatatcggagggaaagtgtcctgcgtccgggctgggtcatctaaactcgggaagggctct
gcgtttgtgatcttcccagttcagaccatcaccacagtggattcacgtgtcgttcagctg
ggctattcggacggacacctggtggtctcgtctctcagccgctgctacctgtgtgacaca
gagagggagaagttctggcgtgtgggtaataaagagcgagatggagagtttggggcatgt
tttttcctgcagggtcctgcgggtcagcgaggtcaggcgctgctgtactgcgcccggcct
ggctcccgcatatgggaggccagtttcagtggcgaggtcttgagcacacaccagttcaaa
cagctgctggcctgtccaccgctgcccctcatctcttacaaggatgagccacattttaac
cccacacagacgagtccacagtctctggctttcccaagactccttcagtttggtgatcaa
aaccttctcacctggaccgattcagccatctacatcttcacacctcacagtggtcaggtt
ctgctgtggacagaggttaaagatgtggtggagatttcagttttccgcaacgagctattt
tgtctacatggtgatggacgtttgtctcacctgtcgctgatgtcacctgagcgctgtgtg
gagcgtctgatgaagagggagaactggacgtttgccgccactgtctgctgcatgtttcag
cacgccattattacatccagggccaggaagtctctccccattgatcgcttggagcagctc
aaggctcagctaaactctgcctcccagcagcagctgattggtcagctggaggaagtgatc
agcaaattggagccactggactctgcctgcagcagccgcaggagcagcatttcctcacac
gagagcttcaacgttctggactgcggcatctaccgcgtcatcagccgaagaggcagccaa
tcagacgatgacgccagctccctcaccaaccaatcgatgctcgaggaggagcggctgaga
gagttcagtttcaccgaggaggagcaggtggagaatgactctcagtctgtacgtggagag
ggcgacaggtcagacctcagcttgcagtttctgccgctgcctttccgctcaaaaccccca
cgagtggccctgcaggctgttcgagacagtgtttcgagctttgtgaagaagaccaccgag
aagatcaacacgcttcagatgaacgcagacctgtggcctcggcctgacctcagggaaggg
gttcaaggggaggtcacggccacagtgacccctcttccagaagaagtcgagcatgaattg
aacgctgagcagtccagcgcggagtctgagctgcaggagttgagggccgccacaaagaaa
gccatctctcagatccaggaccccatggtgttactggaccccatctgcctaagtaatgta
cttcaagagtgggctccagttctggagagggtcctgggcccagaggatcacaccagactt
gaagaaataacaactcaagaggacaagaccctggaggaggaagaacttgtttcatcaatg
tcctgttgcgtcgtggttcagccagatatatactctcctaacctggatgaatccgcaacg
ctcactgaagaagaggaccttggcgaaagcatcccttgctccaccgccccagtcagagct
ttcccacttctggcgaaccatgttgaactaatacagctgttttcccccaaacctctgcct
cctgacctccaggctgacctctcgcagctggcctgtctttatctggagatgggctgtcct
ggtagaggaggggtggaaaacgtgtgtgttttcctgaggaggtacttcttcctgttagac
caggagagagtgaggaagatgtgtatgctgcgatacagagagcaccgcgaagtgatgaag
gcgtatattgctggcatgctggagtttactcaggccagtaaggtggtagaggtgattcag
aagggcgacctgctgaagtctctgcgcagtctaagagaacttcagccctggaacgcgcct
ctgctcctctcacacctgtacagactttatgataagcatggagaggtggctgttcgtgcc
tacccacagttctatcccacaatcctcccctctgacatcatggccatggctttacccagc
cacttcctgccttatctagacaatctggtccaatcacgagccgagcagcagcggttgtct
ttcttgggctctcttctccagccagaaactctgcgacaggattggctggaactggcacta
tcccatgatgccccacagaaggatgacacactcactcctgacggacagcccaggtggcgc
tctcacttcttcagctggggttatggacgtctgctgtctctgttgatccgtctgcctgct
gatctggcctccaaacagaagatgctggagatgtgcagaactcatgggtattggatgggt
tacctgtacctgtgcagagagctgcagcggcggcctgaggctttcagtgccatttgcaga
ctggacgacatgacacttctagagggagatgatggtattgtacctcagtctcttgatgag
tgggtgttgcttctccagctctcccagcaaatcagttcaagcaccgaagccccgtccact
tcagccctgcccagcagccccaatggatcttgttcagacgacactaacggcacgagcaat
agttctcccgacctatcagacggctcgactgactggaacattcgtatcagcccggagaac
atcatcctgcatcttgtgcgggttttcgggccagatcaggccctgacggccctccaggag
cgcgggatacaggtggatctcagttcacactccacgctggtctgcgagctgcttcgtatg
gctgagaagcggcaaagagcactaattcagaccatgttggagcgctgcgaccggtttctg
tggtctcaacacgcttag
DBGET
integrated database retrieval system
