Labeo rohita (rohu): 127156771
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Entry
127156771 CDS
T09007
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
127156771 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127156771 (fanci)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
127156771 (fanci)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
YGL041W_C
CSTF2_hinge
Motif
Other DBs
NCBI-GeneID:
127156771
NCBI-ProteinID:
XP_050955775
LinkDB
All DBs
Position
25:complement(21732331..21747953)
Genome browser
AA seq
1386 aa
AA seq
DB search
MSNMKVTVDKILSSSESDEVDELQKHLSLLSDDQLTTMLTNSALKGKDTGVLIKAIFKGS
PVSVSHGANRRLLVYKHCIPLCESGDLQTEVASDIIGLLMLETHSLPGQALATLASLYVD
AIKVGEMNSGRSLELFPTILTALAATEALAYGKGELSGDEYKKQLINSLCSSRWDPQCVI
HLTTMFRDVPLSAEELQFLIEKILRMFLKLDLQEIPPLVYQLLLLSAKGCKKLVLEGIIS
YFKKQDQLQKDEQRNGESKDVEVQTIPQDQLRHVEGTVILHIVFAIRLDHELGREFFKNL
KMAQSDPLCPFSIALLLSIARIQRYEEQVFEFLKGAITKNFKDDQIQHSSKFLQELLPQC
NSVSDMILDTVKNSVFGWDHVTQGLVQLGFILMDSFGPKAGAFGKVSSSEGTSTTAKTPN
QQACRLGGQVLLESFKMHEPIRGEILEQVLNRLVTKTALPVTHFIDLLSSIVMSAPMILL
ESSSKVTETFDQLSYLPLSTVQGLLKAVQPLLKVSMSMKDALILVLRKAMFSSNLDGRKS
AVAGFLLLLKNFRILGSLASSQASQAITSSQVQADVHSRYNTAANEAFCLEILSSLRRCL
NQQADVRLMLYEGFHDVLRRNSQLASSIMQTLLSQLKRYFEPEQDLLPPLKLDPCISAHG
DQVFIQEPLAHLLCCTVHCLLWNQNVRSGGNVSDDEDDEDEEGGVQSELHAILESITKRM
IKSELEDFELDKCAEFSTSSSVGVKNSIYAVLVMGLNEVLIEYNFITANYSKNHFEDILE
LFKRYHKVSEILRERAGKGRPMSSKTPRSLLSLGFISTLLTALFRDSTQSREECLSVLRT
SGDFLRYSVSVALQKIQQLEETGHTDGPEGQSPDKIFCHLCDITSVLMWRYTNVPSTVED
AGKKEKGQSVSLLCLEGLLRVFTTVLQRYPTRMSNFLSSLDVSGEGEAEGEKSDLTEQTA
FYIRQFQRALMNQLSGGEEEFNSKEAQLLVSILSVLSRQLSPSSQQFVQMITWTVKICKE
TNFEDISLTKGLLSLLFSLHVLYKSPVSLLWEMCQDIHSQLGDIDQDVEVEKQSHFAIIS
MKTAAAATLLVLSQVGKVLDEVDWLIAKKKGQISSDRTISGNTQQPLGQQDPIEKAVTIQ
LGTLLTALHELVQTALSTGPCTDTLMRELSRTYSILTTLSKYYIQLCTTQPGQLPARLEK
LVKLSGSHLTPQCYCFITYVQSGELMPGGPEKSKKKKKEDEAVAAASAKVLRETKAIPNL
IFNIEQYEKFLILLSKKSKVNLMQYMKLSTSRDFRINAATLEAALQEQEQEQQQDESQQV
CLYLNMHIVLWNWVLFIFNAVFISFRLKILSLQRKLKHQRKRGGSSEEKSFFTSICTFYT
PFISLI
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatatgaaggtcacggtggataagatcctatcatcatcggaaagtgatgaagta
gatgagctacaaaaacatctctctttgctgtctgatgatcagctcacaaccatgcttact
aatagtgctctgaaagggaaggacacaggcgtcttgatcaaagccatttttaaaggttca
ccggtaagtgtttcgcatggcgctaaccgtagactgcttgtgtacaagcactgtattcca
ctgtgtgaatctggagacctacagacggaagtggcatcagatatcattgggcttctgatg
ttagagacgcacagtctacctggtcaagctttagccacgttagcgtctctatatgtggat
gccatcaaagtaggtgagatgaatagtgggagatcgctggaacttttcccgacaatccta
acagcacttgctgccacagaagcattggcttatgggaaaggtgagctgagtggagatgaa
tacaagaaacagctgatcaacagtctttgctctagcagatgggatccacaatgtgtaata
caccttacaaccatgttcagggatgttcctttatctgcggaggagcttcagtttttgatt
gagaagattctacggatgttcctcaagttggatctacaggagattcctcctctggtctat
cagctgctgctgctgtccgccaaaggctgtaagaagttggttcttgagggaatcatcagc
tacttcaagaagcaagaccaacttcagaaagacgagcagagaaatggagagagtaaagat
gtggaggtgcagaccatcccacaggatcagctgcgtcatgtagagggaaccgtcatcctc
cacattgtctttgcaattcgtcttgaccatgagctcggcagggagttttttaaaaacctc
aagatggcccaaagtgatccgttgtgtcccttcagcattgctctgctgctctctatagct
cgcatacaacggtatgaagagcaggtatttgagttcctgaagggtgccatcactaagaac
ttcaaggatgatcagattcagcacagctctaagtttctgcaggaactgctgcctcagtgt
aacagcgtctccgatatgattttagacactgttaaaaacagtgtgtttgggtgggatcat
gtcactcaaggtctggtgcagctgggatttatacttatggactcatttgggcctaaagcc
ggagcgtttgggaaggtcagttcctcagaaggaacgtcaaccacagctaaaacgccaaac
cagcaagcatgtcgtcttggtggacaagttctccttgagagcttcaagatgcatgaacca
atcagaggcgagatcctagaacaagtcttgaaccggctggtgactaaaacggccttacct
gtcacccatttcattgaccttctttccagcattgtgatgtctgctcccatgatcctcttg
gaatcttcctctaaggtcactgaaacatttgaccagctctcctacttgcccctcagcact
gtacagggtctcctcaaagctgtgcagcctctgctcaaagtgagcatgtctatgaaagat
gccctcatcctggtcctccggaaagcaatgttctccagtaatttagatggcaggaagtca
gcagtggcaggtttcctgttgctactaaagaactttcgtattctggggagtttagcttcc
agccaggccagtcaggccattacatccagccaggttcaggcagacgttcattcgcgctat
aacactgctgctaatgaagccttctgtctggagatcttgagcagtctacgccgctgcctt
aaccagcaggctgatgtccggctcatgctttatgaaggtttccatgatgtccttcgtcgt
aactctcagctggcaagttccatcatgcagaccctcctatcacaattaaagcgatacttt
gaaccagagcaagatctgcttccgcctctgaagctggatccgtgtatcagcgcccatgga
gatcaggtcttcatccaggagcctctggcgcacttgctgtgctgtacggttcactgcctg
ctgtggaaccagaacgtacggtcaggtggcaatgtgagcgatgatgaagatgatgaagat
gaggaaggtggtgtccaaagtgagctgcacgctatattggaaagcataacgaagcgcatg
attaaaagcgaactggaggattttgagttggataagtgtgccgaattttcaacaagttcc
agtgttggagtgaagaacagcatctacgctgttctggtgatgggactgaatgaggttctc
attgagtataacttcatcactgccaattacagtaagaaccattttgaggacattctggag
ctgttcaagcgctatcataaggtgtctgagatcctgagggagcgagcagggaagggtcgc
cccatgtccagcaaaacccctcgcagtctgctgtctctaggcttcatctccacactgctc
actgctcttttcagagacagcactcagagccgtgaggagtgcctgtcagtgttgcgtacc
agcggagacttcctgcgctactctgtgagtgtggctctccagaagatccagcagctggag
gagacaggacacacagatgggccagagggccagagccctgataaaatcttctgccacctc
tgtgacatcaccagtgttcttatgtggcgctacaccaacgtgccgtcaaccgtggaggat
gctgggaagaaggagaagggccagagtgtgtcgttactatgtctggagggtctgctgcga
gtcttcaccacagtgctacagcgatacccaacacgcatgagcaacttcctgtcatctctc
gatgtttcaggggaaggagaggcagagggtgagaagtctgatctgacagagcaaacagct
ttctatatccgccagtttcagcgagcgctgatgaaccagctcagcgggggagaggaggag
ttcaacagtaaagaagctcagttattggtcagcatcctcagcgtactgtcacgccaactc
agtccttcctctcagcagtttgtgcaaatgatcacttggactgtgaaaatttgtaaggaa
accaacttcgaggacatctcactcactaagggcttgctgtccctgctgttcagcctgcat
gtcctgtataaaagcccagtgtctctgctctgggagatgtgccaggacatacacagccag
ctgggagacatcgaccaggacgtagaggtggagaaacaatctcattttgccatcataagc
atgaaaacggctgcagctgctacgcttctagtcttgtctcaggtcggaaaggtgttggat
gaagtcgactggttgatcgccaagaagaaaggccagataagctcagacagaacaatttca
ggaaatacccagcagccactgggccagcaggacccgattgagaaggctgtcacgattcag
ttaggcacgctgttaacggctctgcatgagctcgttcagaccgccctgtccacgggaccc
tgcacagacacactaatgagagagctcagtcgaacctacagcatcctgactacacttagc
aaatattatattcagctgtgtacgacccaacctggccagctgcctgcacgtttggagaaa
ttggtgaagctgtcagggtctcatcttactcctcagtgttattgtttcatcacgtatgtg
cagagtggagagctgatgccaggagggccggaaaagtcaaagaagaagaaaaaagaagat
gaggcggtagcagctgcttcagctaaagtccttcgtgagactaaagccatcccgaacctc
attttcaacattgaacagtatgagaaatttctcattcttctctccaagaaatccaaggtc
aatctgatgcaatacatgaagctgagcacttccagagacttcagaatcaatgctgccaca
ctggaagctgcgttgcaggaacaggaacaggaacagcagcaggatgaaagccaacaggtg
tgtctttatttaaacatgcacatagtgctgtggaactgggttctcttcatcttcaatgct
gtctttatttcttttagactgaagattctcagccttcagaggaaactcaagcaccaaaga
aaaagaggaggaagcagtgaagaaaagagcttttttacctctatctgcactttttacacc
ccattcatttcgctcatttaa
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