Labeo rohita (rohu): 127156785
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Entry
127156785 CDS
T09007
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
127156785 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127156785 (rag1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127156785 (rag1)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127156785 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_10
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
Fusion_F0
Zn_ribbon_6
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
127156785
NCBI-ProteinID:
XP_050955797
LinkDB
All DBs
Position
25:complement(21387781..21395705)
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AA seq
1065 aa
AA seq
DB search
MEKGRWSSEEAPRASMPDELSHPKFSEWKFKLFRVRSMEKAPLPNETPVEKENHQPEVAR
EVAGSPGSVMKLCFGGKSKENMESARGRVDLKLQEIDTHMNLLKSLCRLCGLSIRKAKGP
SHQVQGDLEESSRCALRRMGCKFLTWPEVIFKVFKVDVTTDMETVHPSLFCHRCWTAAMR
GGGFCSFTRTQILDWKPHSSNCNLCFPKKSSFQRIGRKRAKPFKSAHGLPKRIKRDSSES
SGGNKVRRQTTENTAGSGGKEWLKLSVQRGQWVKNITQCQRDHLSTKLIPPEVPADFLHA
VTCQVCDHLLSDPVQSPCRHLFCRVCILRYSRALGPNCPTCNQHINPSHLTRPAKFFLAT
LNSLPLLCPREECSSDWVRFDSFREHCLNHYLEKESQEEQTPSEQNIDGYLPVNKGGRPR
QHLLSLTRRAQKHRLRDLKNQVKAFAEKEEGGDVKSVCLTLFLLALRAGNEHKQADELEA
MMQGRGFGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRNAEKELLPG
FHQFEWQPALKNVSSSWDVGIIDGLSGWTTSVDDVPADTISRRFRYDVALASALKDLEED
IMEGLRERELDDSVCTSGFTVVVKESCDGMGDVSEKHGSGPALPEKAVRFSFTIMSISIR
VEGEDDGITIFQEQKPNSELSCRPLCLMFVDESDHETLTGILGPVIAERKAMTESRLILS
VGGLLRSFRFFFRGTGYDEKMVREMEGLEASGSTYICTLCDSTRAEASQNMVLHSITRSH
DENLERYEIWRTNPFSESADELRDRVKGVSAKPFMETQPTLDALHCDIGNATEFYKIFQD
EIGEVYQRSNPSREERRRWRSTLDKQLRKKLKLKPVMRMNGNYARRLMTREAVEVVCELV
PSEERREALRKLMDLYLQMKPVWRSTCPSRDCPDQLCQYSYNSQQFADLLSTTFKYRYDG
KITNYLHKTLAHVPEIVERDGSIGAWASEGNESGNKLFRRFRKMNARQSKTFELEDILKH
HWLYTSKYLQKFMEAHKNSAKAMQATFNPEETPDEVDVALEVPDF
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagggaggtggagttctgaagaggctcccagagcctctatgcctgacgaactg
tctcatcctaagttttccgaatggaagtttaaactctttcgggtcaggtccatggagaag
gcccctctgcctaacgaaacaccggtggagaaggaaaaccaccagcctgaggtagcaagg
gaagtggcaggctctccaggcagtgttatgaagctctgttttggagggaagagtaaggaa
aacatggagagtgctcgagggagagtggaccttaagctgcaagagattgatacgcatatg
aatcttctcaaatccctatgtcgcctttgtggcctttcgatacggaaggcgaaaggtccg
tcgcatcaagtccaaggagacttggaagagtctagccggtgtgccttgcgtaggatgggc
tgcaagtttctgacctggccagaggtgatctttaaggtctttaaagtggatgtgacaacc
gacatggagacggtgcatccgtctttgttttgtcacagatgctggaccgctgccatgagg
ggaggaggcttctgttctttcaccaggacccagatcctggactggaagccccactcctcc
aactgcaacctctgcttcccgaagaagagctcgtttcagagaataggaaggaagcgggcc
aaaccatttaaaagtgcacatggccttccaaagagaatcaaaagggactcctctgagtcc
tcagggggcaacaaagttcggagacagaccacagagaatactgcgggatcaggtgggaaa
gaatggctaaagctatcagttcagagaggacagtgggtaaagaatatcacacagtgccag
agggaccatctaagcactaagctcatcccccctgaagtcccagcagacttcctacatgct
gttacttgccaagtgtgtgatcacctgctttccgaccctgttcagtcaccgtgtagacac
ttgttctgccgggtctgcatcctaaggtacagtcgagctttgggcccaaactgtcccacc
tgtaaccaacatataaatccatcccacctgaccaggccagccaaattcttcctcgccacc
ctcaactctctccccctactttgccccagagaagaatgcagcagcgactgggtccgattt
gactcatttagagaacactgcctcaaccactaccttgaaaaagagtctcaggaagaacaa
acaccttcagagcagaatatcgatggttatttgccggtcaacaaaggtgggcgtcctcga
cagcacctgttgtcgctgacccgtcgggctcaaaagcaccggctgagagatttgaagaac
caggtgaaggcgtttgctgaaaaggaagaaggaggggatgtgaagtctgtctgtttgacg
ctcttccttctggcgttgagagctgggaatgaacacaaacaagcagatgaactggaagct
atgatgcaaggcagaggatttgggctgcatcccgcagtgtgtttggctataagggtaaac
accttccttagctgcagtcagtaccacaagatgtaccgcaccgtaaaggccactagtggc
cgccagatattccaacccctgcacactctacgcaatgctgagaaagagcttctccccggg
ttccaccaatttgaatggcagccagctttaaaaaacgtttccagctcctgggatgttggc
atcatcgacggcctctctggttggacgacctcagttgacgatgtccctgcggacaccatt
tccagaagattccgttacgacgtggcactggcttctgcattaaaagatctggaagaagac
ataatggaaggactaagagagagggaactggacgacagcgtgtgcacttctggtttcacc
gttgtggtaaaagaatcatgtgatggtatgggagatgtcagcgagaagcatggatcaggt
ccagcgcttcctgagaaggcagtgaggttttctttcacaatcatgtccatctccatccga
gttgagggtgaggatgatggcatcactatctttcaagaacaaaagccaaactctgagctg
tcctgcagacctttgtgcctcatgtttgtggacgagtccgaccacgagaccttgactggc
atcttgggacctgtgatagcagagcggaaagccatgacagaaagtcggcttattttatct
gtcggtggcctgctacgatctttcaggttcttcttccgaggcaccggctatgatgaaaag
atggttcgtgaaatggaaggcctagaagcttcaggctctacttatatatgcacgctctgc
gactcaacccgagcggaagcgtctcagaacatggtgctacattccatcacacgcagccac
gatgaaaatctcgagcgctacgagatctggaggacaaatcctttctcggagtccgccgat
gaactccgtgacagagtcaaaggtgtttccgccaagcctttcatggagacccaacctact
ctagatgccctgcactgcgacataggcaatgctactgaattctacaagatctttcaggat
gagattggcgaagtctaccagaggagcaatccgagtcgagaggaacgccgccgttggcgg
tcaaccctggacaagcagctaagaaagaagctgaaactcaagcctgtgatgaggatgaat
ggaaactacgctcgtcggctgatgacacgcgaagctgtggaggtggtctgcgagctggtt
ccttccgaggaacgccgtgaggcgctgcggaaactaatggacctctatctccagatgaag
cctgtttggcgttccacctgtccctcccgagactgtcctgaccagctctgtcagtacagc
tacaactctcagcaatttgctgatctcctttccaccacgtttaagtatcgctacgatgga
aaaatcaccaactacctccacaagactctggctcatgttcctgagatcgttgagagagac
ggctctattggagcatgggccagcgaaggcaacgaatctgggaacaagctgttcagacgt
tttcggaagatgaatgcaaggcagtccaaaacgttcgagcttgaagatatactgaaacac
cactggctgtacacctcgaagtaccttcagaagtttatggaggctcacaagaattcagcc
aaagcaatgcaagccacattcaacccagaagagaccccggatgaagttgatgtggctctt
gaagttccagatttttaa
DBGET
integrated database retrieval system
