Labeo rohita (rohu): 127156822
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Entry
127156822 CDS
T09007
Symbol
ireb2
Name
(RefSeq) iron-responsive element-binding protein 2
KO
K22416
iron-responsive element-binding protein 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127156822 (ireb2)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127156822 (ireb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
MATalpha_HMGbox
DUF807
Motif
Other DBs
NCBI-GeneID:
127156822
NCBI-ProteinID:
XP_050955863
LinkDB
All DBs
Position
25:23265286..23280230
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AA seq
977 aa
AA seq
DB search
MALALPQHEHPFGHLIDTLQSEQYEERRYFNPQKLSDARYEELPFCMRVLLESAIRKCDG
FYIKTDDVSSILDWQKQQNQAEVAFSPARVLLQDFTGIPAMVDLAAMRDALAKQGVDPNL
VNPRCPTDLIVDHSLQIDYSKCAIQSPPTPTDESHSAVRSPAGRPSPRGSSSSSGGHCAG
QRPGHRGSCSKPSCSDAPSGRSAAVQIENTPLLCPFHLQPVSEPETMIRNQEMELVRNKE
RLQFFKWCSKAFKNVNVVPPDINTVHQVNLEYLCQVVQEEKGFIFPDSVVGTDSHTTMIN
GLGILGWGVGGIESEAVMLGQPVSLTLPQVVGCKLVGTINPLATSIDIVLGITKHLRQAG
IGGKFVEFFGPGVQQLSAPDRTTIANMCPEYNATVSFFPVDDITLQHFKHTICSEEKLVV
LEDYLKAIKLFRSYGEQSEEPQYSEVIEMNLSSIVPHVSGPKRPQDRVAVTCMKEDFISC
LNEKVGFKGFHISKEKQATQVPFLHDGAEYNLAHGSVVIAAVISCTNNCNPSVMLAAGLL
AKKAVEAGLMVKPYIRTSLVPGSGTVTHYLNTSGVLPYLRKLGFEVVGYGCATCVGNTAP
LPESVVDAIKQGDLVACGVLSGNRHLEGRLCDCVRANYLASPPLVVAYAIAGTVSINLET
EPLGVNSDGKDVYLRDIWPSKEEVNHTEENIVIASMFKDLRSRMEKGSTFWNNIESVESA
LFPWDHKSTYIRCPSFFSKLSKEVCTPQSIEGAYPLLFLGDKVTTDHISPAGSIARVSAA
AKYLQSKRLTPREFNSYGARRGNDAVMTRGTFASIKLQNRLIGKTGPKTLYIPSGQTLDV
FEAAERYQRDGVPLIILAGKEYGSGSSRDWAAKGPYLLGVRAVIAESFEKIHRNHLVGMG
IAPLQFLPGQNADSLELCGKERFTINIPQELTPRQQLTVQTSTGKSFSVTAVFENDMDVA
FFRHGGILKYVARSLLP
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgctttacctcagcacgaacatccattcggccatttgattgacactctccag
agcgaacaatatgaagagcggcgatatttcaacccacagaagctgagcgatgccagatac
gaggaactgccgttctgtatgcgggttctcctggagtccgctatccggaagtgtgacggc
ttctacataaagactgacgatgtctccagtattttggactggcagaagcagcagaaccag
gctgaggttgcgttctcacccgccagggttctgctgcaggactttacaggaattcctgct
atggtggacctggcagccatgagagatgctttagctaaacagggggtcgatccaaacctg
gtgaaccctagatgccccacggacctcatcgtagatcattctctgcagattgactacagc
aaatgtgctatccagagccctccaacccccacggatgagagtcacagtgccgtcagatct
cctgccggccgaccatccccacgagggagcagcagcagcagcggtggtcactgtgcaggt
caacgaccgggtcatcggggcagctgcagtaaaccctcctgctccgacgctcccagtggc
agaagcgcagcagtacagatagagaacacgcctcttctctgccccttccacctgcagcct
gtttcagagcctgaaacgatgatcagaaaccaagagatggaactagtcagaaacaaagag
aggctgcaattctttaagtggtgttcaaaagcctttaaaaacgtcaacgtggttccgcca
gacatcaacacagtgcatcaggtgaatctagagtacctgtgtcaggtggtacaggaagaa
aaggggtttatttttcctgacagcgtggtgggaacagattcccacaccaccatgatcaac
ggcctcgggatcctaggctggggagttggaggtattgaatcagaggcagtcatgttaggt
cagccagtgtctttgactctgccacaggtcgtcggctgtaaactcgtggggaccatcaat
cctctcgccacgtcaattgatattgtgctgggcattactaagcatctgcgtcaggcagga
atcggcgggaagttcgttgagttctttgggcctggtgtacagcaactctcggctcccgat
cggaccaccatcgctaacatgtgccctgagtacaacgccaccgtgagcttctttcctgtg
gatgacatcactcttcagcactttaaacacaccatttgcagtgaggagaagcttgtggtt
ttagaagactatctgaaggctatcaaactcttcagaagctatggcgagcaatcagaagag
ccacagtattcagaggtcatcgagatgaacctgagctcaattgtgcctcatgtcagtgga
cccaaacggccacaggacagagtcgccgtgacttgcatgaaagaagactttatcagctgc
ctgaatgagaaggtgggtttcaagggcttccacatatccaaagagaaacaggcgactcag
gtgccgttcctgcacgatggggccgagtacaacctggcgcacggatctgtcgtcatcgct
gctgtcatcagctgcaccaacaactgcaacccgtccgtcatgctggccgcaggtctacta
gcgaagaaagccgttgaggctggtctgatggtaaaaccatatatcaggaccagtctagtg
cctggcagtggaaccgtcacacattatctgaacaccagtggagttctgccctacctcagg
aaactcgggtttgaggtggtgggttatggatgtgccacttgtgtgggcaatacagcacct
ttacctgagagtgtggtggacgccattaaacagggtgatttggtggcgtgtggcgtgctc
tccggaaacaggcatttagaaggacgcctgtgtgactgtgttcgtgcgaattatttggct
tctcctccactggtggtggcgtacgccatcgcaggcacagtcagcatcaacctggagaca
gaaccgctaggagtgaactcagatgggaaggatgtgtatctgcgggatatctggccgtcc
aaagaagaggtgaaccacacagaggagaacatcgtcatcgcctctatgttcaaagatctg
aggagtcgaatggagaaaggaagtacgttctggaacaatatagagtctgtcgaatctgcc
ctcttcccatgggatcacaaatccacctacattcgatgtccgtccttcttcagcaaactg
tctaaagaggtgtgcactcctcagtccattgagggtgcgtacccactcctctttctgggt
gataaagtgacaacagatcacatttctccagcgggaagcattgcaagagtcagcgctgcc
gccaaatacctacagagtaaacgtttgacccctcgcgaattcaattcctacggtgcacga
agaggaaacgatgctgtaatgactcgaggaacatttgccagcataaagctccaaaaccgc
ctcatcgggaaaaccggacccaaaacactgtacattccatcaggacagacgctggatgtg
tttgaagctgctgaacgctatcagagagatggagttcccctcatcatcctggcaggaaaa
gagtatggctctgggagctcacgcgactgggccgccaaaggaccttatttattgggggtc
cgtgcggtgatagcagagagctttgagaagattcataggaatcatttggtggggatggga
atcgctccgctgcagttcctgccgggacaaaacgccgactcactggaactgtgtggaaaa
gagcgattcaccatcaacatcccacaggagctcacacccagacaacagctcacagtacag
acgagcacagggaagagtttcagcgtcacggctgttttcgagaacgacatggatgtggca
tttttcagacacggaggcatcctgaagtacgtagctcgttctctgctgccgtaa
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