Labeo rohita (rohu): 127156916
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Entry
127156916 CDS
T09007
Symbol
lamb1a
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127156916 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127156916 (lamb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
ATG17_like
F5_F8_type_C
Laminin_I
Motif
Other DBs
NCBI-GeneID:
127156916
NCBI-ProteinID:
XP_050956028
LinkDB
All DBs
Position
25:complement(7457505..7499121)
Genome browser
AA seq
1785 aa
AA seq
DB search
MLLQLAALLILGAWALADVPELGDVCTEGSCYPATGDLLIGRAHQLSATSTCGLQKPEPF
CIVSHLQEEKKCFVCDSRETYDESMNQITSHRIENVVTTFAPNRLKTWWQSENGLENVTI
QLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAYDCESSFPFVSQGPMT
KVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITNLRVKFTKLHTL
GDNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPIDGAGEVVDGMVHGHCMCNHN
TMGLNCERCQDFYHDLPWRPAEGRNTNACKKCNCNHHSDSCHFDMAVYRASGNVSGGVCD
DCRHNTMGHNCEQCKPFFYQNPEKDIRDPNICEPCNCDPVGSLNGGVCDALTDVSVGLIA
GQCRCKPNVEGERCDQCKQGHYGLSDDPLGCQPCTCNALGTVPGGSPCDTDSGNCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAVNNNCSPETGQCQCREHMFGRRCDQVE
SGFYFIALDHYTYEAEDAKFGPGVTVVPRPQPQDRSPTWTGIGFVNVPEGAYLEFSIDNI
PHSMEYDIIIRYEPQLPEQWEEVLMTVIRPRVITADSRCANTMPDDDNQVVSLHPGSRYV
VLSRPVCFEEGLNYTVRLSLSLYSALSDVQSPYTLIDSIVLMPHCKNLDIFSGSGSEGGD
LVTNSAWETFQRYRCLENSQAVVKTPMTDICRNYIFSVSALLHQGVKACQCDPQGSLSTV
CDPSGGQCQCRPNVVGRNCDKCAPATFFFGPQGCRPCDCSPEGSIHSFCHEATGQCECIH
GAYGRQCDRCLPGYWGFPNCRPCTCNGHAEQCDPLTGQCLSCRDYTTGHNCERCLSGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFSGACYKSLDSNQVFCVCNQGYKGARCEECAPGYYG
NPHEVGGECRPCQCNSNIDMTDPESCDARTGTCLKCLYHTEGEDCNRCKLGYYGNALTQS
CRKCVCNHMGTVEETCPSPGNCNCDLNSGQCQCLPNVVGQHCDQCAPDTWNIASGKGCEA
CDCDLNHSFSSSCNEIMGQCSCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQQ
CNKVTGHCVCVEGVSGPRCDTCARGYTGKFPNCERCHQCFAEWDVIVGDLTNQTHRLVQK
VNTIKATGITGPYQTTINNIESSSNSIRNILAQNPATQPLTEIQGLLEQATALMAEMNTN
LNLTEETLSEISSDNNSTDTKLNSLKEEAQKLEQTVKELLEQVEFVKNSDIRGARASMNR
YYEQSQMAEIRANASTIDPDNLVNQSATLRTETEDLMNQTKEEFIQRQDEYSKKLDNLAG
QLETLDLSELSEKTCGSPAGSENCADSPCGGLSCVDGEGNRKCGGEGCEGLTTLAHNAWQ
KSKDFDLEIISAMEEVDKLSKMVSEAKVRADEAKLNAQEVLAKTNETKKRVDSSNEELRQ
LIKQIRDFLTQDGADLESIEVVANEVLQMQMPTTPAQLQNLTAEIRERVGSLTDVEDILN
QSAADILRAESLLEQARKARKEATDVKDTAEMVKEALQQAERAQSTVTEALKQASADIKG
TQDLLVTVESETSDSELKLSNATRRLLKLESDVALLKEKALNTSTSASSTEKEAESINEL
AEKLKKDLDSELKDKYSSVEELITQKAEGVAEAKKRAEKLQQEAKNLLLQASDKLQLLKN
LEKSYDENQKLLEDKANELVDLEKAVKELLQEISHKVTVYSTCLF
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacagctcgcagcccttttaattttaggggcatgggctctcgcagatgtgcct
gagctgggagatgtttgcacagagggaagctgttatcccgccacaggagatcttctcatt
ggaagagcgcaccaactctcggccacttccacatgcggtctccagaaacctgagcctttt
tgtatcgtcagtcatttgcaggaagagaagaagtgctttgtgtgcgattccagggaaacc
tacgacgagagcatgaaccaaataaccagccacagaatcgaaaatgtcgtgactacgttt
gccccgaaccgcctcaagacttggtggcagtcggaaaacggcctggagaacgtcacaatc
cagcttaaccttgaggcagagttccacttcacccacctcatcatgacctttaaaacgttc
agacctgctgcgatggtgatcgaacgttctgcggacttcgggaagacttggcaagtgtac
cgttacttcgcctatgactgcgagtcctccttccccttcgtctctcaaggacccatgacc
aaagtggacgacgttatctgcgattctcgctactccgacattgaaccctcaactgagggc
gaggtcatctttagggttttggatccggccttcaggattgatgatccctacagccccaga
atccaaaacatgttgaagatcactaatctgagggtgaagttcactaagctgcacactctc
ggggacaatcttctggactcacgtatagaaatcaaggagaagtactattacgcaatctac
gatatggtggtcagaggaaactgtttttgttatggtcacgcatctgaatgcgcccccatc
gatggagctggagaggtcgtggatggcatggtccatggccattgtatgtgtaatcataac
accatgggtctgaactgtgaacgctgtcaagacttttaccatgacctgccctggaggccc
gcagagggacgcaacaccaacgcctgtaaaaaatgcaactgcaaccatcactctgattcc
tgtcatttcgacatggctgtgtatcgggcctcgggtaacgtgagcggcggcgtatgtgac
gactgcaggcacaacaccatgggtcacaattgcgagcagtgcaagcctttcttctaccaa
aatccggagaaagacatccgcgaccccaacatctgcgagccctgtaactgcgatccggtc
ggctctctcaatggtggagtgtgtgatgcgctgacagacgtgtctgttgggctgatcgcg
ggtcaatgtcgctgtaagcctaatgtggagggtgaacgctgtgaccagtgcaaacaaggc
cattacggactcagcgacgaccctctgggatgccagccatgcacatgcaacgctttggga
acggttccaggtggaagtccatgcgatacagactcaggaaactgctactgtaaacgtctg
gttaccggaaggaactgtgaccagtgtctgcctcagcactggggtctcagtaacgacatg
gatggctgcagaccatgtgactgtgatcatggtggtgcagtcaacaacaattgctctcct
gaaaccggtcagtgtcagtgtcgcgagcacatgtttggcagacgctgcgaccaggtggaa
tctggtttttacttcatcgctctggaccattacacttatgaagcagaggacgccaagttc
ggacctggtgtgacggttgtcccaagaccccagcctcaagacagatcccctacttggaca
ggcattggttttgtgaacgttcctgaaggtgcctatcttgagttcagcatcgacaacatc
ccccactctatggagtatgacattatcatccgatatgaacctcagctgccagagcagtgg
gaagaagtgttgatgactgtcatcagacctcgcgtcattaccgccgacagccgctgtgca
aacacgatgcccgacgatgacaaccaggtggtgtctctgcatcccggatccaggtatgtg
gtgctgtctaggcctgtgtgttttgaagaaggcttgaactacaccgtgcgtttgagcctg
tctctctactcggctctcagcgatgtgcagtcaccgtacacactcatcgactcgatcgtc
ctcatgccacactgcaaaaacctggatattttctctggctctggatcagagggtggagac
ttggtgaccaacagcgcctgggaaaccttccagcgctaccgctgtttggagaacagccaa
gccgtggttaaaacccccatgactgatatctgcaggaattacatcttcagtgtgtcagct
cttctgcaccagggagttaaagcctgtcagtgtgacccgcaggggtctctcagcacggtt
tgtgacccaagcggtggccagtgccagtgtcgtcccaatgtggttggcaggaactgtgac
aaatgcgccccagcgaccttcttttttggcccgcaaggctgccggccatgtgattgcagt
cctgagggatccatccactctttctgtcacgaggccaccggtcagtgtgagtgtattcac
ggagcgtatgggcggcagtgcgaccgctgtctgcctggatactggggtttccctaactgt
cgcccctgcacttgcaatggccacgccgagcagtgcgacccgctcacgggtcagtgtctg
tcctgcagagactacactactggacacaactgcgagaggtgtttgagcggctattatggt
gaccctgtcctgggctctggagaccactgccgtccctgcatgtgtccggacggtcccggc
agcgggagacagttctctggcgcgtgttataagagcctcgactctaaccaggtgttctgt
gtctgcaaccagggatataaaggtgccaggtgtgaagaatgcgcccctggttattacgga
aacccacacgaggtgggcggagaatgccggccctgtcagtgcaacagcaacatcgacatg
acagacccggagtcctgcgacgcccgtacgggcacctgtctcaaatgcctgtaccacaca
gagggcgaggattgcaaccgctgcaagctgggctattacggcaatgcactaacccagagc
tgcagaaagtgtgtgtgtaatcatatgggcactgttgaggagacgtgcccctctccgggt
aactgcaactgtgacttaaacagcggccagtgccagtgtcttcccaacgtggtgggccag
cactgcgatcagtgcgcgccggacacctggaatatagctagcgggaaaggctgcgaggcc
tgcgactgcgatctcaaccattccttcagctcatcatgcaatgagattatgggccagtgc
tcttgtaaacccgggtttggcggcagaacctgccgagagtgtagagaactgttctggggg
aatcctgaggtcaaatgccacgcatgtgattgtgacccaagaggcatcgcggagcagcag
tgcaacaaggtcacaggtcactgcgtttgcgtggagggcgtttccgggccccgctgcgac
acttgcgctcgaggctacacaggcaagttcccaaattgcgagcgctgccaccagtgcttt
gccgaatgggatgtaattgtgggcgacctcaccaaccaaacccatagactggtccagaag
gtcaataccatcaaagccaccggcattacaggaccctaccagaccaccatcaataacatc
gaaagcagctccaactcaatccgcaacatcttagcccagaatccagccactcagcctcta
acggagatccagggacttcttgaacaagctactgccttgatggctgaaatgaacaccaac
cttaacctgacggaggagaccttgtccgagatctcatccgacaacaacagcacggatacc
aaactgaactccctcaaagaagaagcccagaaactagaacagacggtgaaagaacttctg
gaacaggtggagtttgtgaagaattcagacattcgaggggccagagccagcatgaatcga
tactacgagcagtcccagatggcggagatccgtgcgaatgcctccaccattgacccagac
aacctggtcaatcagtctgctaccctgcggacagaaacggaggacttgatgaaccagacc
aaagaagagttcattcaaaggcaagatgagtattcgaagaaactggataacctcgctgga
cagctggagactctggacctctctgaacttagcgagaagacatgtggcagtccagctggc
tcagagaactgtgccgactccccatgtggaggcctgagctgtgtggatggggaaggaaac
aggaagtgtggaggagagggatgtgaaggcctcaccacgttggcccacaatgcctggcag
aaatccaaagactttgacctagagattatcagtgctatggaggaagtggacaagctctcc
aaaatggtgtcagaggcaaaagtaagagcagatgaagcaaaacttaatgctcaagaagtg
cttgcaaaaaccaatgagactaaaaagcgcgtggacagcagcaacgaggagctacgccaa
ctcatcaaacagatccgagacttcctcactcaagacggagcggatctggaaagcatcgag
gttgtggccaatgaagttctgcagatgcagatgcccaccacaccagcccagctccagaac
ctgaccgcagagatcagggagcgcgtaggaagcttgacagacgtcgaggacatcctcaac
cagagtgccgctgacatcctgagagcagaaagcctgctggaacaagcccgcaaggccagg
aaggaggcaacggatgtaaaagacacagctgagatggtgaaggaggccttgcagcaggct
gagcgcgcacagagtacagtaaccgaggcattgaaacaggccagcgctgacatcaaggga
acacaagacttgctggtcacggtggaatccgagacgtctgattcggagctaaaactgagt
aacgccacccgaaggctcctgaagttagaaagcgacgtagctctgctaaaagaaaaggct
cttaacacctccaccagcgccagcagcacagaaaaagaggctgagagcatcaacgaactg
gctgagaagctcaaaaaggatctggattcagagctgaaagacaagtacagtagtgttgag
gagctgatcacgcagaaggctgaaggagtggccgaggccaagaaaagagcggagaaactc
caacaggaggctaaaaatctgctgctacaggccagcgacaaacttcagcttctaaaaaat
cttgagaagagctatgatgaaaatcagaagctgctggaggacaaagccaatgagctggtg
gatctggagaaggctgtgaaggaactgcttcaggagatcagtcacaaagtcaccgtctac
agcacatgtctgttttaa
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integrated database retrieval system
