KEGG   Labeo rohita (rohu): 127156916
Entry
127156916         CDS       T09007                                 
Symbol
lamb1a
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1a
  KO
K05636  laminin, beta 1
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04510  Focal adhesion
lroh04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127156916 (lamb1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127156916 (lamb1a)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 ATG17_like F5_F8_type_C Laminin_I
Other DBs
NCBI-GeneID: 127156916
NCBI-ProteinID: XP_050956028
LinkDB
Position
25:complement(7457505..7499121)
AA seq 1785 aa
MLLQLAALLILGAWALADVPELGDVCTEGSCYPATGDLLIGRAHQLSATSTCGLQKPEPF
CIVSHLQEEKKCFVCDSRETYDESMNQITSHRIENVVTTFAPNRLKTWWQSENGLENVTI
QLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAYDCESSFPFVSQGPMT
KVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITNLRVKFTKLHTL
GDNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPIDGAGEVVDGMVHGHCMCNHN
TMGLNCERCQDFYHDLPWRPAEGRNTNACKKCNCNHHSDSCHFDMAVYRASGNVSGGVCD
DCRHNTMGHNCEQCKPFFYQNPEKDIRDPNICEPCNCDPVGSLNGGVCDALTDVSVGLIA
GQCRCKPNVEGERCDQCKQGHYGLSDDPLGCQPCTCNALGTVPGGSPCDTDSGNCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAVNNNCSPETGQCQCREHMFGRRCDQVE
SGFYFIALDHYTYEAEDAKFGPGVTVVPRPQPQDRSPTWTGIGFVNVPEGAYLEFSIDNI
PHSMEYDIIIRYEPQLPEQWEEVLMTVIRPRVITADSRCANTMPDDDNQVVSLHPGSRYV
VLSRPVCFEEGLNYTVRLSLSLYSALSDVQSPYTLIDSIVLMPHCKNLDIFSGSGSEGGD
LVTNSAWETFQRYRCLENSQAVVKTPMTDICRNYIFSVSALLHQGVKACQCDPQGSLSTV
CDPSGGQCQCRPNVVGRNCDKCAPATFFFGPQGCRPCDCSPEGSIHSFCHEATGQCECIH
GAYGRQCDRCLPGYWGFPNCRPCTCNGHAEQCDPLTGQCLSCRDYTTGHNCERCLSGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFSGACYKSLDSNQVFCVCNQGYKGARCEECAPGYYG
NPHEVGGECRPCQCNSNIDMTDPESCDARTGTCLKCLYHTEGEDCNRCKLGYYGNALTQS
CRKCVCNHMGTVEETCPSPGNCNCDLNSGQCQCLPNVVGQHCDQCAPDTWNIASGKGCEA
CDCDLNHSFSSSCNEIMGQCSCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQQ
CNKVTGHCVCVEGVSGPRCDTCARGYTGKFPNCERCHQCFAEWDVIVGDLTNQTHRLVQK
VNTIKATGITGPYQTTINNIESSSNSIRNILAQNPATQPLTEIQGLLEQATALMAEMNTN
LNLTEETLSEISSDNNSTDTKLNSLKEEAQKLEQTVKELLEQVEFVKNSDIRGARASMNR
YYEQSQMAEIRANASTIDPDNLVNQSATLRTETEDLMNQTKEEFIQRQDEYSKKLDNLAG
QLETLDLSELSEKTCGSPAGSENCADSPCGGLSCVDGEGNRKCGGEGCEGLTTLAHNAWQ
KSKDFDLEIISAMEEVDKLSKMVSEAKVRADEAKLNAQEVLAKTNETKKRVDSSNEELRQ
LIKQIRDFLTQDGADLESIEVVANEVLQMQMPTTPAQLQNLTAEIRERVGSLTDVEDILN
QSAADILRAESLLEQARKARKEATDVKDTAEMVKEALQQAERAQSTVTEALKQASADIKG
TQDLLVTVESETSDSELKLSNATRRLLKLESDVALLKEKALNTSTSASSTEKEAESINEL
AEKLKKDLDSELKDKYSSVEELITQKAEGVAEAKKRAEKLQQEAKNLLLQASDKLQLLKN
LEKSYDENQKLLEDKANELVDLEKAVKELLQEISHKVTVYSTCLF
NT seq 5358 nt   +upstreamnt  +downstreamnt
atgctgttacagctcgcagcccttttaattttaggggcatgggctctcgcagatgtgcct
gagctgggagatgtttgcacagagggaagctgttatcccgccacaggagatcttctcatt
ggaagagcgcaccaactctcggccacttccacatgcggtctccagaaacctgagcctttt
tgtatcgtcagtcatttgcaggaagagaagaagtgctttgtgtgcgattccagggaaacc
tacgacgagagcatgaaccaaataaccagccacagaatcgaaaatgtcgtgactacgttt
gccccgaaccgcctcaagacttggtggcagtcggaaaacggcctggagaacgtcacaatc
cagcttaaccttgaggcagagttccacttcacccacctcatcatgacctttaaaacgttc
agacctgctgcgatggtgatcgaacgttctgcggacttcgggaagacttggcaagtgtac
cgttacttcgcctatgactgcgagtcctccttccccttcgtctctcaaggacccatgacc
aaagtggacgacgttatctgcgattctcgctactccgacattgaaccctcaactgagggc
gaggtcatctttagggttttggatccggccttcaggattgatgatccctacagccccaga
atccaaaacatgttgaagatcactaatctgagggtgaagttcactaagctgcacactctc
ggggacaatcttctggactcacgtatagaaatcaaggagaagtactattacgcaatctac
gatatggtggtcagaggaaactgtttttgttatggtcacgcatctgaatgcgcccccatc
gatggagctggagaggtcgtggatggcatggtccatggccattgtatgtgtaatcataac
accatgggtctgaactgtgaacgctgtcaagacttttaccatgacctgccctggaggccc
gcagagggacgcaacaccaacgcctgtaaaaaatgcaactgcaaccatcactctgattcc
tgtcatttcgacatggctgtgtatcgggcctcgggtaacgtgagcggcggcgtatgtgac
gactgcaggcacaacaccatgggtcacaattgcgagcagtgcaagcctttcttctaccaa
aatccggagaaagacatccgcgaccccaacatctgcgagccctgtaactgcgatccggtc
ggctctctcaatggtggagtgtgtgatgcgctgacagacgtgtctgttgggctgatcgcg
ggtcaatgtcgctgtaagcctaatgtggagggtgaacgctgtgaccagtgcaaacaaggc
cattacggactcagcgacgaccctctgggatgccagccatgcacatgcaacgctttggga
acggttccaggtggaagtccatgcgatacagactcaggaaactgctactgtaaacgtctg
gttaccggaaggaactgtgaccagtgtctgcctcagcactggggtctcagtaacgacatg
gatggctgcagaccatgtgactgtgatcatggtggtgcagtcaacaacaattgctctcct
gaaaccggtcagtgtcagtgtcgcgagcacatgtttggcagacgctgcgaccaggtggaa
tctggtttttacttcatcgctctggaccattacacttatgaagcagaggacgccaagttc
ggacctggtgtgacggttgtcccaagaccccagcctcaagacagatcccctacttggaca
ggcattggttttgtgaacgttcctgaaggtgcctatcttgagttcagcatcgacaacatc
ccccactctatggagtatgacattatcatccgatatgaacctcagctgccagagcagtgg
gaagaagtgttgatgactgtcatcagacctcgcgtcattaccgccgacagccgctgtgca
aacacgatgcccgacgatgacaaccaggtggtgtctctgcatcccggatccaggtatgtg
gtgctgtctaggcctgtgtgttttgaagaaggcttgaactacaccgtgcgtttgagcctg
tctctctactcggctctcagcgatgtgcagtcaccgtacacactcatcgactcgatcgtc
ctcatgccacactgcaaaaacctggatattttctctggctctggatcagagggtggagac
ttggtgaccaacagcgcctgggaaaccttccagcgctaccgctgtttggagaacagccaa
gccgtggttaaaacccccatgactgatatctgcaggaattacatcttcagtgtgtcagct
cttctgcaccagggagttaaagcctgtcagtgtgacccgcaggggtctctcagcacggtt
tgtgacccaagcggtggccagtgccagtgtcgtcccaatgtggttggcaggaactgtgac
aaatgcgccccagcgaccttcttttttggcccgcaaggctgccggccatgtgattgcagt
cctgagggatccatccactctttctgtcacgaggccaccggtcagtgtgagtgtattcac
ggagcgtatgggcggcagtgcgaccgctgtctgcctggatactggggtttccctaactgt
cgcccctgcacttgcaatggccacgccgagcagtgcgacccgctcacgggtcagtgtctg
tcctgcagagactacactactggacacaactgcgagaggtgtttgagcggctattatggt
gaccctgtcctgggctctggagaccactgccgtccctgcatgtgtccggacggtcccggc
agcgggagacagttctctggcgcgtgttataagagcctcgactctaaccaggtgttctgt
gtctgcaaccagggatataaaggtgccaggtgtgaagaatgcgcccctggttattacgga
aacccacacgaggtgggcggagaatgccggccctgtcagtgcaacagcaacatcgacatg
acagacccggagtcctgcgacgcccgtacgggcacctgtctcaaatgcctgtaccacaca
gagggcgaggattgcaaccgctgcaagctgggctattacggcaatgcactaacccagagc
tgcagaaagtgtgtgtgtaatcatatgggcactgttgaggagacgtgcccctctccgggt
aactgcaactgtgacttaaacagcggccagtgccagtgtcttcccaacgtggtgggccag
cactgcgatcagtgcgcgccggacacctggaatatagctagcgggaaaggctgcgaggcc
tgcgactgcgatctcaaccattccttcagctcatcatgcaatgagattatgggccagtgc
tcttgtaaacccgggtttggcggcagaacctgccgagagtgtagagaactgttctggggg
aatcctgaggtcaaatgccacgcatgtgattgtgacccaagaggcatcgcggagcagcag
tgcaacaaggtcacaggtcactgcgtttgcgtggagggcgtttccgggccccgctgcgac
acttgcgctcgaggctacacaggcaagttcccaaattgcgagcgctgccaccagtgcttt
gccgaatgggatgtaattgtgggcgacctcaccaaccaaacccatagactggtccagaag
gtcaataccatcaaagccaccggcattacaggaccctaccagaccaccatcaataacatc
gaaagcagctccaactcaatccgcaacatcttagcccagaatccagccactcagcctcta
acggagatccagggacttcttgaacaagctactgccttgatggctgaaatgaacaccaac
cttaacctgacggaggagaccttgtccgagatctcatccgacaacaacagcacggatacc
aaactgaactccctcaaagaagaagcccagaaactagaacagacggtgaaagaacttctg
gaacaggtggagtttgtgaagaattcagacattcgaggggccagagccagcatgaatcga
tactacgagcagtcccagatggcggagatccgtgcgaatgcctccaccattgacccagac
aacctggtcaatcagtctgctaccctgcggacagaaacggaggacttgatgaaccagacc
aaagaagagttcattcaaaggcaagatgagtattcgaagaaactggataacctcgctgga
cagctggagactctggacctctctgaacttagcgagaagacatgtggcagtccagctggc
tcagagaactgtgccgactccccatgtggaggcctgagctgtgtggatggggaaggaaac
aggaagtgtggaggagagggatgtgaaggcctcaccacgttggcccacaatgcctggcag
aaatccaaagactttgacctagagattatcagtgctatggaggaagtggacaagctctcc
aaaatggtgtcagaggcaaaagtaagagcagatgaagcaaaacttaatgctcaagaagtg
cttgcaaaaaccaatgagactaaaaagcgcgtggacagcagcaacgaggagctacgccaa
ctcatcaaacagatccgagacttcctcactcaagacggagcggatctggaaagcatcgag
gttgtggccaatgaagttctgcagatgcagatgcccaccacaccagcccagctccagaac
ctgaccgcagagatcagggagcgcgtaggaagcttgacagacgtcgaggacatcctcaac
cagagtgccgctgacatcctgagagcagaaagcctgctggaacaagcccgcaaggccagg
aaggaggcaacggatgtaaaagacacagctgagatggtgaaggaggccttgcagcaggct
gagcgcgcacagagtacagtaaccgaggcattgaaacaggccagcgctgacatcaaggga
acacaagacttgctggtcacggtggaatccgagacgtctgattcggagctaaaactgagt
aacgccacccgaaggctcctgaagttagaaagcgacgtagctctgctaaaagaaaaggct
cttaacacctccaccagcgccagcagcacagaaaaagaggctgagagcatcaacgaactg
gctgagaagctcaaaaaggatctggattcagagctgaaagacaagtacagtagtgttgag
gagctgatcacgcagaaggctgaaggagtggccgaggccaagaaaagagcggagaaactc
caacaggaggctaaaaatctgctgctacaggccagcgacaaacttcagcttctaaaaaat
cttgagaagagctatgatgaaaatcagaagctgctggaggacaaagccaatgagctggtg
gatctggagaaggctgtgaaggaactgcttcaggagatcagtcacaaagtcaccgtctac
agcacatgtctgttttaa

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