Labeo rohita (rohu): 127156925
Help
Entry
127156925 CDS
T09007
Symbol
washc4
Name
(RefSeq) LOW QUALITY PROTEIN: WASH complex subunit 4
KO
K18465
WASH complex subunit 7
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127156925 (washc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127156925 (washc4)
Membrane trafficking [BR:
lroh04131
]
Protein recycling
Others
WASH complex
127156925 (washc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WASH-4_N
WASH-7_mid
WASH-7_C
HTH_40
Motif
Other DBs
NCBI-GeneID:
127156925
NCBI-ProteinID:
XP_050956040
LinkDB
All DBs
Position
25:complement(11378176..11396398)
Genome browser
AA seq
1173 aa
AA seq
DB search
MAVDSLSPDWEFDRFDDGSQKIHTEVQVKNYEKFLEEYTAQLQGIEEALDDSIGDVWDFT
LDPITLKLLPYEQSSLLELIKTDNKVLNKVITVYAALCCEVKKLKYEAETKFYNGLLYYG
EGVSDTSMVEGESQIQMGRFISFLQELSCFVSRCFEVVVNMVHQLAALYNSNKSATKIIE
STGVHFQTVYEHLGELLVVLITLDEIMENHTTLKDHWKMYKRLLKSVHHNPAKFAIPEEK
LKPFEKLLLKLEGQLLDSMIFQACVEQRFDDPGEGVSVSXNSAFAEEFAYNIRTIFANVE
SKLGEPSEIDQRDKYTGVCGLFVLHFHIFRTVDKKIYKSLLDVCKKVPAVTLAANIIWFP
DTFLINKVPAAAKLMDKKSIQSIRSSRDAFLQQKAQTLMKDMQSYYIFVTSWMMKMESIL
SKEPKPDKLSEDLSNRCNIFVQGILYAYSISTIIKTTMNMYMSMQRPMTKTSVKALCRLV
ELLKAVEHTFHRRSLVVADSVSHITQQLQTQALASISTAKKRVISDKKYSEQRLDVLSAL
VLAENTLNGPSTKERRLIMSLALSVGTQMKTFKDEELLPLQLVLKKLDLISELRERVKVQ
CDCSFLYWHRTVFPIYLDDVYENAVDAARIHYMFSALRDCVPTMLHAKHMESCDQLLECY
DTEIMEILNEHLLDKLCKEIEKDLRLSVHTHLKLDDRNPFKVGMKDLAHFFSLKPIRFFN
RFIDIKAYVTHYLDKTFYNLTTVALHDWATYSEMRNLATQRYGLVMTEAHLPSQTLEQGL
DVLEIMRNIHVFVSRYLYNLNNQIFIERTSNNKHLNTINIRHIANSIRTHGTGIMNTTVN
FTYQFLRKKFYIFSQFMYDEHIKSRLIKDIRFFRETKDQTDQKYPFERAEKFNRGIRKLG
LTPDGQSYLDQFRQLISQIGNAMGYVRMIRSGGLHCCSSAIRFVPDLEDIVNFEELVKEE
GLSEETQKAASQLDCVLSDLTSNSAEGTEYFKMLVGVFAPEFRSIKNMHLRNFYMIVPPL
TVNFVEHSISCKEKLNKKNKVGAAFTDDGFAMGVAYILKLLDQYQEFDSLHWFQAVREKY
VKEMNAVVKEQNVQSTSQDEKLMQTMNLTQKRLDVYLQEFELLYFSLSSARIFFRADKTA
AEETQEKKDREEVAKTGPGSSSIEGSPGETSAK
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggattcgttatctcctgattgggagtttgaccgctttgatgatggatcgcaa
aaaattcacacagaagtgcaagttaaaaactatgagaagttcttagaggaatatacggct
cagctccagggtattgaagaagcgctggacgactctatcggagatgtatgggacttcact
ctggaccccatcactttgaagctcctgccgtatgaacagtcctcactgttggagctcatc
aagacagataataaggtgcttaataaagtcatcacagtgtatgcagctctttgctgtgaa
gttaaaaagctgaaatatgaggctgaaaccaagttctacaatggcttgttgtattatggt
gaaggagtgtcagacactagtatggtggagggagagtctcagattcagatggggcgcttc
atttcgttcttacaggagctatcctgctttgtgtcgcgctgctttgaggtggtggtcaac
atggtacaccagctggctgctttgtacaacagcaacaagagtgcgacaaaaatcattgag
tccacaggtgtacactttcagacggtgtacgagcatctgggagaacttctggtggtcctc
atcaccctggatgagatcatggaaaaccataccacgctgaaagatcactggaagatgtac
aaaaggttactgaaatctgtccatcataacccagctaagtttgccattccagaggagaaa
ctaaaaccctttgagaagctcttattgaagctggaggggcagctgttggacagcatgatt
tttcaggcttgtgtggagcagaggtttgatgacccaggagaaggtgtatccgtttctnaa
aacagtgcctttgcggaggagtttgcgtacaatatcagaaccatttttgccaacgttgaa
tctaagcttggagagccgtcagagattgatcagcgggataaatatacgggcgtatgtggc
ctctttgtgctgcacttccatatcttcaggactgtggacaagaagatctacaaatccctg
ttggatgtgtgtaaaaaggtccctgcagtgacattagcagcgaatataatctggtttcca
gacacatttctgataaacaaagtcccagcggcagctaaactgatggacaagaagagcatc
cagagcatccgcagcagcagagatgcattcctgcagcaaaaggcgcagacgcttatgaag
gacatgcagtcatactacatatttgtcacctcttggatgatgaagatggagtctatatta
tcaaaagaaccgaaaccagacaaactttctgaggatttgagcaacaggtgtaatatcttt
gtgcagggaatcctgtacgcttacagcatcagcaccatcatcaagaccactatgaacatg
tacatgtccatgcagcggcccatgaccaaaacttcggtgaaggccctctgccgattggtg
gagctgttaaaagctgtggagcacacgttccaccggcgctcactggttgtagcagattct
gtctctcacatcacgcagcagcttcagactcaggctctggcctccatctccactgctaag
aaacgcgtgatctctgataagaagtacagtgagcagaggctggacgtactgtcggctctg
gttctggcagagaacactctgaatgggcccagcaccaaagagaggaggctgatcatgtct
ctggctctcagtgttggcactcagatgaaaaccttcaaggatgaggagctcttgccttta
cagcttgtgctgaaaaagttggacttaatcagtgaattaagagagcgagtcaaagtacaa
tgcgactgcagtttcctatactggcatcgtactgtcttccccatatacctggatgacgtg
tacgaaaatgcagtggatgcagccagaattcactacatgttcagtgcgctcagagactgt
gtgcccaccatgttacacgccaaacacatggagtcatgtgatcagctgctggagtgttat
gacactgagatcatggaaatcctcaatgagcacctgctagacaagctgtgtaaggagatc
gagaaggacctgcgcttgtctgtgcacacacacctcaaactggacgaccgaaacccattt
aaagtgggcatgaaggatctagctcactttttctctctcaagcccattcgcttcttcaac
cgtttcatcgacatcaaagcctatgtgactcactatctagacaagacgttttacaacttg
acgaccgtggctctccatgactgggccacgtacagcgaaatgaggaacctcgctacgcag
cgctatggtttggtgatgactgaggcgcatctccccagccagactctggaacagggtctg
gacgtcctcgagatcatgaggaacattcacgtctttgtctcgcgctacctctacaaccta
aacaaccagatcttcattgagaggaccagcaacaacaagcacttaaacaccattaacatc
cgccacatcgccaactccattcgcactcatggaaccggtattatgaacacaacggtgaac
ttcacatatcagttcctccgcaagaagttctacattttcagtcagttcatgtatgacgag
cacatcaaatccagactcatcaaagacatccgcttcttcagggaaaccaaggatcagacc
gaccaaaagtacccctttgagcgagcagagaagtttaaccgtggcatcaggaagttgggt
cttactccagatggtcagagctacctggatcagttcagacagctcatcagtcagatcggt
aatgcgatgggttatgtgcgcatgattcggtctggagggctccactgctgcagcagcgct
atcaggtttgttcctgatctagaggacattgtgaactttgaggagcttgtgaaagaggaa
ggcctttctgaagagacgcagaaagctgccagccaactggactgtgtgcttagtgacctg
accagcaactcggctgaaggaactgagtacttcaagatgctggtgggagttttcgcaccg
gagtttcgcagcatcaagaacatgcacttgaggaacttctacatgatagttcctcctctg
acagtaaattttgtggaacattctatcagctgcaaagaaaaactaaacaagaagaacaaa
gtgggagctgcgtttacagacgatggttttgccatgggagtcgcctacatcctgaagctt
ctggaccagtatcaggagtttgactctctccactggtttcaggctgtgagggaaaagtat
gtgaaagaaatgaatgcggtggtcaaagagcagaacgttcagtccaccagccaagacgag
aagctcatgcagaccatgaacctgacccagaagagactggacgtatatctacaggagttc
gagctgctctatttctctctgagcagcgctcggatcttcttcagagctgataagacggca
gccgaggagacccaggagaagaaggacagagaagaagttgccaaaactggaccaggttcc
tcatcgattgagggctctcctggggaaacaagtgccaagtga
DBGET
integrated database retrieval system
