Labeo rohita (rohu): 127156928
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Entry
127156928 CDS
T09007
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03320
PPAR signaling pathway
lroh04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127156928 (pparab)
03320 PPAR signaling pathway
127156928 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127156928 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lroh03310
]
127156928 (pparab)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127156928 (pparab)
Nuclear receptors [BR:
lroh03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
127156928 (pparab)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127156928
NCBI-ProteinID:
XP_050956043
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Position
25:complement(26579465..26641763)
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AA seq
467 aa
AA seq
DB search
MVDMEKHYNPPSPLDDSVLDSPLCQDFIGGMEALQDISQSIDEDALSNFEVTENQSSGLG
SGSECSTALDALTPASSPSSCVYGGPAGQDEFTSTSLNLECRVCSDRASGYHYGVHACEG
CKGFFRRTIRLKLEYDKCERRCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQSEK
LRLKAEILTGEREVEDPQLADQKTLAKQIHEAYLKNFNMNKSKARTILTGKTSTPPFVIH
DMETLQLAEQTLVAKMVGSSAALLNKDAEVRIFHCCQCTSVETVTELTEFAKSVPGFSNL
DLNDQVTLLKYGVHEAFFAMLASCMNKDGLLVAYGNGFITREFLKSLRRPFGEMMEPKFQ
FAMKFNSLELDDSDLALFVAAIICCGDRPGLVNVPHIERMQESIVNVLHLHLKSNHPDNG
FLFPKLLQKLVDLRQLVTEHAQLIQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggtagacatggagaagcactacaaccccccgtcgccactggacgactccgtgctggac
agtcctctgtgccaggacttcatcgggggaatggaagcccttcaggacatctctcagtcc
atcgatgaggacgctctcagcaacttcgaggtgaccgagaaccagtcttcaggtctggga
tccggatcggagtgctccactgcgttagatgcgctaactcccgcgtccagcccgtcgtcg
tgtgtgtacggcggcccggcgggacaggacgagttcacctccacctctctgaacctggag
tgccgcgtgtgttcggaccgcgcgtcaggataccactacggcgttcacgcgtgtgagggc
tgtaagggtttcttccgccggaccatccgtctcaaactggagtacgataagtgtgaacgc
cgctgtaagatccaaaagaagaaccggaacaagtgccaatactgtcgctttcagaagtgc
ctgtctgtgggcatgtcccacaatgccatccgctttgggcgaatgccacagtcggagaag
ctgaggttgaaggcggagatcctaacgggagagcgagaggtcgaagacccgcagctggcc
gatcagaaaactctggccaagcagatccatgaggcctacctgaaaaacttcaacatgaac
aaatccaaagcacggaccatcctgacgggcaagacgagcacaccgccttttgtcatccac
gacatggagacgctgcagctggccgaacagacccttgtggccaagatggtgggctcttct
gcggctctgctgaataaagacgctgaggttcgaatattccactgctgtcagtgcacttcg
gttgagacggtgactgaactgactgaatttgccaagtccgtgccaggcttctcaaacctg
gacttaaatgaccaggtgacattattaaagtatggcgttcatgaggcgttctttgccatg
ttggcgtcgtgcatgaataaagacggtctgctggtcgcgtacggcaatggctttatcacc
agagagtttctgaagagcttgcgacggccgtttggcgaaatgatggagcccaagtttcag
tttgcaatgaagtttaactccctcgaactggacgatagtgaccttgcgctgtttgtcgct
gctatcatctgctgtggagatcggccaggcctggtgaacgtcccgcacatcgaacgcatg
caagagagcatcgtaaacgtgcttcacctgcacctcaagagcaaccatcccgacaacggt
ttcctcttccctaaactcctccagaaactagtggatctgcggcagctggtgacggagcac
gctcagttaatacaggaaatcaaaaagacagaagacacttcgctgcatcccttactgcag
gagatttacagagacatgtactga
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