Labeo rohita (rohu): 127156934
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Entry
127156934 CDS
T09007
Symbol
pax6a
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127156934 (pax6a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
127156934 (pax6a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
127156934
NCBI-ProteinID:
XP_050956049
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Position
25:16666786..16685119
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AA seq
459 aa
AA seq
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MPQKEYYNRATWESGVASMMQNKVYDICNEGHSGVNQLGGVFVNGRPLPDSTRQKIVELA
HSGARPCDISRILQTHADAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVA
TPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA
DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGGGENTNSISSNGEDSDE
TQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFS
NRRAKWRREEKLRNQRRQATNSSSHIPISSSFSTSVYQPIPQPTTPVSFTSGSMLGRSDT
ALTNTYSALPPMPSFTMANNLPMQPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQAHMNS
QSMATSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaatactataaccgggccacgtgggagtctggcgtcgcgtccatgatg
caaaacaaggtgtatgacatctgtaacgaaggtcacagtggagtgaaccagctcggcggt
gtgttcgtcaacggcagaccgctgcccgactccacaagacagaaaatagttgaactcgct
cacagtggtgcgcggccgtgtgacatatccaggattctgcagacccatgctgatgcaaaa
gtccaagtgctggacaatgaaaacgtgtcgaacggctgcgtgagtaaaatcttgggtaga
tactatgaaacgggctccatcagacccagggcgatcggaggaagtaaaccacgagtagcg
actcccgaggtggtcggcaaaattgcccagtacaagagggagtgtccgtcaatcttcgcg
tgggaaatccgagacaggctgctatcagagggggtctgcacaaacgataatatacccagt
gtgtcatcgataaacagagtactgcgcaacctggctagcgaaaagcaacagatgggcgca
gatggcatgtatgaaaagctgaggatgctgaacggtcagaccggcacgtgggggacccgg
ccgggctggtaccccggaacctcagtgccaggacagcccaatcaagatggctgccaacaa
tcagacggaggtggtgagaacacaaactcgataagctccaatggagaggattcagatgag
acccaaatgaggcttcagctaaaacgaaaactgcaaagaaaccgcacatctttcacacaa
gaacaaatagaagcacttgaaaaagagttcgagagaacgcactatcctgacgtttttgca
cgagagagactagctgcgaaaatagatttaccggaagcaagaatacaggtgtggttctca
aacagaagagcaaaatggagaagggaggaaaagctaagaaatcaaagaagacaagccaca
aactcttcaagtcacatacccatcagtagcagcttcagcactagcgtttatcagccaatc
cctcagcccacaacgccagtatccttcacatcaggctccatgttgggaagatcagacaca
gcccttacgaacacatacagcgccctgccaccaatgccaagcttcaccatggccaacaac
ctacctatgcaacccagccagacctcatcctactcttgcatgttgcccactagtccttcg
gtgaatgggcggagctatgacacatacacacccccacacatgcaggcacatatgaacagc
caatcaatggccacctcaggcacaacctcaacgggtctaatctcgcctggagtgtctgta
ccagtccaagtgccaggcagtgaaccagacatgtcccagtactggcccagactacagtga
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