KEGG   Labeo rohita (rohu): 127156937
Entry
127156937         CDS       T09007                                 
Name
(RefSeq) neogenin isoform X1
  KO
K06766  neogenin
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04350  TGF-beta signaling pathway
lroh04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    127156937
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127156937
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lroh04515]
    127156937
Cell adhesion molecules [BR:lroh04515]
 Immunoglobulin superfamily
  DCC/UNC5 family
   127156937
SSDB
Motif
Pfam: Neogenin_C fn3 I-set Ig_3 Ig_2 ig Pur_ac_phosph_N Ig_DSCAM-DSCAML_C V-set Interfer-bind fn3_2 SusE EphA2_TM FAM176 DUF4834
Other DBs
NCBI-GeneID: 127156937
NCBI-ProteinID: XP_050956058
LinkDB
Position
25:complement(25799800..25970831)
AA seq 1434 aa
MAERGARLLVFFASLIVLRFGGADKGSDIRSFTPFRFSVEPVDMLAVRGLPAVLNCSAAS
DAPVRVEWKKDGTFLNLVADDRKRQLADGSLLISTVVHSKHNKPDEGVYQCVATIDNLGT
ISSRTARLTVAGLPRFLSQPEGVSVRTGGTEMLSCEVTEELVPFTRWERDGRPVELDGRV
IQLPGGALVISNASQSDAGLYRCTIDGLGPAKSTEEAELQVSADSGVEEKLETLQGPVAV
AKVVGESVLLPCVMKGYPVPVIRWTLNDRPIDESRERFAVIGGGSLRIVNLTEEDAGIYV
CQADSGNMTSEIQAELTVHVPPRFLTRPSNTYAQESMDIIFECDVTGSPPPTVKWMKDGD
TVIPSDYFRIVKQHNLQVLGLVKSDEGFYQCLAENDAGNVQASAQLVILDLDVALPSAVP
SLTDATTDHVASSPAERNGPTPSAPRDVVASLVSTRFIKLTWRLPAEPHGENITYSVFYS
LEGTNRERVENTSGPGEMQVTIQNLVPDTKYTFRVVASNANGPGESSTPLTVATQLEVQV
PGPAPNLQVVSVGTTSVALSWERPVTGNGEIQTYKLFYSEKGQDSEQDMDVTGLSYTMTG
LKKFTEYSFRVVAYNKHGPGVSTEDVVVRTLSDVPSAPPQNLTLEVLNSTSITVRWQPPP
PGTLNGELTGYKLRYRKGLRRADTIEISTTQLFQLIDGLEKGKVYTVRVSATTVNGTGPT
TEWIAAETFENDLDESQVPGVPSSLHVRPLVNRIVVSWTPPENQDILVRGYKIGYGIGSP
HAHTVTLDYKQRFYSIDNLDPSSHYVINLKAFNNMGEGIPIYNSATTRPQSDPIDPDIDF
YELFNNPYTPAPDPTPMLPPVGVQATVLSQDTVKVSWADNSLAKNQKITDSRYYTIRWKT
NIPANTKYKMANTTSLFHTVTALKPNTLYEFSVMVTKSRRSSTWSMTAQGTTFESIPSSA
PKDVTVISKEGNPRIININWQPPTEANGKITGYIIYYSTDVKAEVHDWVVEPVVGNRLTH
QIQGLTLDTAYYFKIQARNSKGMGPMSDAVQFRTPKAEPSDKMSSDQGLQVKPGHPTLPE
HGIGSNMDKPGITGSQENHILVIVVIVSVGVFTIIAVVVGAVLCTRRSNSHQKKKRAACK
SSTSSHKYKSSSKDLKPPDLWIHHERLELKPMDKSPDPNPVMTETPIPRTAQDPAAEPSH
QRRGHEVEESVSTLAGRRGARPKMMMPFDSQPPQPVISAHPIHSLDHLHHYHHHYHLPPR
GYLHHQISLRAPATPSSFSDRPPSAESVRNQPPAPEPPVAPSQPSTTAEIQKTEAVIKEE
EPPSINPPTAHVRPTHPLKSFAVPAVTVSAHNPPTYETALPSTPLLAQPVPGVKTASIGT
LNRARAPMAVTVPSAPDQSETSKMLDMTYETDELSEEMAHLEGLMKDLNAITTG
NT seq 4305 nt   +upstreamnt  +downstreamnt
atggcggagcggggggcaaggctgctcgtgtttttcgcaagtctcatcgttctccggttc
ggcggtgcggataaaggttctgacattcgaagctttaccccgttccggttctcggtggaa
cccgtcgacatgctggccgtacgcggcctccccgctgtcctcaactgctcggcagctagc
gacgctccggtgagggtggaatggaagaaggacgggacgtttctgaacctagtggcggac
gaccggaagcggcagctagcagacggctctttgctcatcagtacagtggtccactccaaa
cacaataaacctgatgagggggtgtaccagtgcgtggccaccatcgacaatctgggcacc
atcagcagccgaactgcacgactcacagtggcaggacttccgcggttcctcagtcagccg
gagggcgtgtccgtgcgcacgggcggcactgagatgctgagctgcgaggtgacggaggag
ctcgtcccgttcacccgctgggagagggacggtcggcccgtggagctggacgggagggtc
atacagctgcccggcggagctctggtcatcagcaacgcatcccagagcgacgccggactc
taccgctgcaccatagatggtctgggaccggccaaaagcacagaagaggcagaactacag
gtgtctgcagattcaggtgttgaagaaaaactggagactctccagggccccgttgccgtg
gcaaaggttgtcggggagagcgtgttgttgccgtgcgtcatgaagggataccctgtgcca
gtgattcgctggacgttgaacgaccggccgattgacgagagccgtgagcgttttgcggtg
attggcggaggaagcctgcggatcgtcaacctgaccgaagaggatgctgggatatacgtc
tgccaggcggacagcggcaacatgaccagcgagatccaggccgagctcacggtgcacgtt
cctccacggttcttaacgagaccctccaacacttatgcccaggagtccatggacattatc
tttgagtgtgacgtcaccggctcaccgccgcccaccgtcaaatggatgaaggatggagac
acggtcattcccagtgattatttcaggatagtgaagcaacataacctgcaagttttgggt
ttagtaaaatcagacgaaggtttttatcagtgtttagcggagaacgacgccgggaacgtc
caggccagcgctcagctggtcatactggatttagacgttgcccttccttctgctgtccct
tcactgaccgatgccactactgaccatgtagcgtccagcccggccgagcgcaacggccca
acgccctccgccccgcgtgatgtcgtggcgtctctggtgtccacccgattcatcaagctg
acgtggcgacttcctgccgagccgcacggggagaacatcacctactctgtcttctacagt
ctggaaggcacaaacagggagcgtgtggagaacaccagcggcccgggagagatgcaggtc
accatccaaaacctcgtccccgacactaaatacacctttcgggtggtcgcgtccaacgct
aacggcccgggcgagagttccaccccacttacggtggccacccagctggaagttcaggta
ccgggtccggctcccaatctgcaggtggtctctgtcggcactacctcagtcgcgctgagc
tgggagagacccgtcactggaaacggagagatccagacctacaaactcttctacagcgag
aagggacaagactcggagcaggacatggacgtcacgggtctgtcctacaccatgacgggc
ctcaagaagtttacggagtacagttttagggtggtggcgtataacaaacacggccccggc
gtctccactgaggatgttgtggtccgaacgctgtctgacgtgccgagcgcccctccgcag
aacctcactctggaggtcctgaactccacgagcatcacggtccgatggcagccgcctcct
cctggtaccctgaacggagagctgacggggtataaattacgctacaggaaaggactcagg
agagcggacacgattgagatctccaccacacagctctttcagctcattgacggtctggag
aaaggaaaggtctacacagtgcgagtgtcggccacaaccgtgaacggaaccggaccgacg
acggagtggatcgccgccgaaaccttcgagaacgacctggacgagtctcaggttccagga
gtcccgagttctcttcacgttcgtccgctggtgaaccgaatcgtggtgagttggactcct
ccggaaaaccaggacattttagtgcgaggttataaaatcggatacggaatcggcagccct
catgcccacacggtcacgctggattacaagcagcgtttctacagcatcgataacctcgat
cccagttcccattacgtcatcaacctcaaagctttcaacaacatgggcgaaggcattccc
atttacaacagcgccacaacgaggcctcaatccgaccccatagaccctgatattgatttt
tatgaactctttaataacccgtacaccccagcacccgaccccacacccatgctgcccccg
gtgggcgttcaggccaccgtcctcagccaggacaccgtcaaagtcagctgggccgacaac
tcgctcgccaagaaccagaagatcacagactccagatattacaccatccgctggaagacc
aacatccccgccaacaccaaatataagatggcaaacaccacatctctgttccatacagta
acggctctgaagcccaacacgctttatgagttctcggttatggtgaccaagagccgcagg
agcagtacgtggagtatgacggcccaggggaccacttttgaatccattcccagctctgct
ccaaaagatgtgacggtgatcagtaaagagggaaatccacgaatcatcaacatcaactgg
caacctccgactgaagccaatggcaaaatcacagggtacatcatctactacagcaccgat
gtgaaagctgaggtccacgattgggtcgtggagcccgtggtgggaaacagactgacccat
cagattcagggtctgacgctggacaccgcatattacttcaagatccaggccagaaactcc
aaaggcatggggccaatgtcagacgcggtgcagttccgcaccccgaaagctgaaccgtca
gacaaaatgtcaagtgatcaagggctgcaagtcaaacccggtcacccgaccctaccggag
cacgggattggatccaacatggataaaccaggcatcacgggcagccaggagaatcacatt
ctggtgatcgtggtgattgtgtctgttggcgtgttcactatcatcgctgtggtcgtgggg
gccgtcctgtgcacgcgccgctccaactcccaccagaaaaagaaacgtgctgcctgtaag
tccagcaccagctcccacaagtacaagagctcgtccaaagacctgaaacctcctgatctc
tggatccatcacgagcgtctggagctcaaacccatggacaaatcacccgaccccaacccg
gtcatgacagagacgcccatcccacgaaccgcccaggacccggccgccgagcccagccac
cagagacggggtcacgaggtggaggagagcgtgtccactttggccggtcggaggggagcg
agacccaaaatgatgatgccgttcgactctcagcctccccagcctgtgattagcgctcac
ccaatccattccctcgatcaccttcatcactatcatcatcactatcacctcccgccgcgc
ggctaccttcatcaccagatcagcctgagagcgcccgccacccccagctcattctcagac
aggcctccgtctgcagaatcagtgaggaatcagccccctgcacctgaacctccggtcgcc
cccagtcagcccagcactacagctgagatccagaagacagaggcggtgatcaaagaggaa
gagccgccgagcataaacccgcccacggcccacgttcggcccacacacccgctcaagagc
ttcgctgtgccggccgtcaccgtttccgcccataacccgcccacctatgagaccgcatta
cccagcaccccactgctggcacaaccagtgcctggcgtgaagacggcatctatcgggaca
ttaaatcgagctcgagctccaatggcagtaacagtccccagtgcacccgaccaatcagaa
accagcaagatgcttgacatgacgtatgagactgatgaactctcagaggaaatggcccac
ctggagggtctgatgaaggacctgaacgccatcaccacaggctga

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