Labeo rohita (rohu): 127156937
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Entry
127156937 CDS
T09007
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04350
TGF-beta signaling pathway
lroh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127156937
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127156937
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127156937
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
DCC/UNC5 family
127156937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
fn3_2
SusE
EphA2_TM
FAM176
DUF4834
Motif
Other DBs
NCBI-GeneID:
127156937
NCBI-ProteinID:
XP_050956058
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All DBs
Position
25:complement(25799800..25970831)
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AA seq
1434 aa
AA seq
DB search
MAERGARLLVFFASLIVLRFGGADKGSDIRSFTPFRFSVEPVDMLAVRGLPAVLNCSAAS
DAPVRVEWKKDGTFLNLVADDRKRQLADGSLLISTVVHSKHNKPDEGVYQCVATIDNLGT
ISSRTARLTVAGLPRFLSQPEGVSVRTGGTEMLSCEVTEELVPFTRWERDGRPVELDGRV
IQLPGGALVISNASQSDAGLYRCTIDGLGPAKSTEEAELQVSADSGVEEKLETLQGPVAV
AKVVGESVLLPCVMKGYPVPVIRWTLNDRPIDESRERFAVIGGGSLRIVNLTEEDAGIYV
CQADSGNMTSEIQAELTVHVPPRFLTRPSNTYAQESMDIIFECDVTGSPPPTVKWMKDGD
TVIPSDYFRIVKQHNLQVLGLVKSDEGFYQCLAENDAGNVQASAQLVILDLDVALPSAVP
SLTDATTDHVASSPAERNGPTPSAPRDVVASLVSTRFIKLTWRLPAEPHGENITYSVFYS
LEGTNRERVENTSGPGEMQVTIQNLVPDTKYTFRVVASNANGPGESSTPLTVATQLEVQV
PGPAPNLQVVSVGTTSVALSWERPVTGNGEIQTYKLFYSEKGQDSEQDMDVTGLSYTMTG
LKKFTEYSFRVVAYNKHGPGVSTEDVVVRTLSDVPSAPPQNLTLEVLNSTSITVRWQPPP
PGTLNGELTGYKLRYRKGLRRADTIEISTTQLFQLIDGLEKGKVYTVRVSATTVNGTGPT
TEWIAAETFENDLDESQVPGVPSSLHVRPLVNRIVVSWTPPENQDILVRGYKIGYGIGSP
HAHTVTLDYKQRFYSIDNLDPSSHYVINLKAFNNMGEGIPIYNSATTRPQSDPIDPDIDF
YELFNNPYTPAPDPTPMLPPVGVQATVLSQDTVKVSWADNSLAKNQKITDSRYYTIRWKT
NIPANTKYKMANTTSLFHTVTALKPNTLYEFSVMVTKSRRSSTWSMTAQGTTFESIPSSA
PKDVTVISKEGNPRIININWQPPTEANGKITGYIIYYSTDVKAEVHDWVVEPVVGNRLTH
QIQGLTLDTAYYFKIQARNSKGMGPMSDAVQFRTPKAEPSDKMSSDQGLQVKPGHPTLPE
HGIGSNMDKPGITGSQENHILVIVVIVSVGVFTIIAVVVGAVLCTRRSNSHQKKKRAACK
SSTSSHKYKSSSKDLKPPDLWIHHERLELKPMDKSPDPNPVMTETPIPRTAQDPAAEPSH
QRRGHEVEESVSTLAGRRGARPKMMMPFDSQPPQPVISAHPIHSLDHLHHYHHHYHLPPR
GYLHHQISLRAPATPSSFSDRPPSAESVRNQPPAPEPPVAPSQPSTTAEIQKTEAVIKEE
EPPSINPPTAHVRPTHPLKSFAVPAVTVSAHNPPTYETALPSTPLLAQPVPGVKTASIGT
LNRARAPMAVTVPSAPDQSETSKMLDMTYETDELSEEMAHLEGLMKDLNAITTG
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggggcaaggctgctcgtgtttttcgcaagtctcatcgttctccggttc
ggcggtgcggataaaggttctgacattcgaagctttaccccgttccggttctcggtggaa
cccgtcgacatgctggccgtacgcggcctccccgctgtcctcaactgctcggcagctagc
gacgctccggtgagggtggaatggaagaaggacgggacgtttctgaacctagtggcggac
gaccggaagcggcagctagcagacggctctttgctcatcagtacagtggtccactccaaa
cacaataaacctgatgagggggtgtaccagtgcgtggccaccatcgacaatctgggcacc
atcagcagccgaactgcacgactcacagtggcaggacttccgcggttcctcagtcagccg
gagggcgtgtccgtgcgcacgggcggcactgagatgctgagctgcgaggtgacggaggag
ctcgtcccgttcacccgctgggagagggacggtcggcccgtggagctggacgggagggtc
atacagctgcccggcggagctctggtcatcagcaacgcatcccagagcgacgccggactc
taccgctgcaccatagatggtctgggaccggccaaaagcacagaagaggcagaactacag
gtgtctgcagattcaggtgttgaagaaaaactggagactctccagggccccgttgccgtg
gcaaaggttgtcggggagagcgtgttgttgccgtgcgtcatgaagggataccctgtgcca
gtgattcgctggacgttgaacgaccggccgattgacgagagccgtgagcgttttgcggtg
attggcggaggaagcctgcggatcgtcaacctgaccgaagaggatgctgggatatacgtc
tgccaggcggacagcggcaacatgaccagcgagatccaggccgagctcacggtgcacgtt
cctccacggttcttaacgagaccctccaacacttatgcccaggagtccatggacattatc
tttgagtgtgacgtcaccggctcaccgccgcccaccgtcaaatggatgaaggatggagac
acggtcattcccagtgattatttcaggatagtgaagcaacataacctgcaagttttgggt
ttagtaaaatcagacgaaggtttttatcagtgtttagcggagaacgacgccgggaacgtc
caggccagcgctcagctggtcatactggatttagacgttgcccttccttctgctgtccct
tcactgaccgatgccactactgaccatgtagcgtccagcccggccgagcgcaacggccca
acgccctccgccccgcgtgatgtcgtggcgtctctggtgtccacccgattcatcaagctg
acgtggcgacttcctgccgagccgcacggggagaacatcacctactctgtcttctacagt
ctggaaggcacaaacagggagcgtgtggagaacaccagcggcccgggagagatgcaggtc
accatccaaaacctcgtccccgacactaaatacacctttcgggtggtcgcgtccaacgct
aacggcccgggcgagagttccaccccacttacggtggccacccagctggaagttcaggta
ccgggtccggctcccaatctgcaggtggtctctgtcggcactacctcagtcgcgctgagc
tgggagagacccgtcactggaaacggagagatccagacctacaaactcttctacagcgag
aagggacaagactcggagcaggacatggacgtcacgggtctgtcctacaccatgacgggc
ctcaagaagtttacggagtacagttttagggtggtggcgtataacaaacacggccccggc
gtctccactgaggatgttgtggtccgaacgctgtctgacgtgccgagcgcccctccgcag
aacctcactctggaggtcctgaactccacgagcatcacggtccgatggcagccgcctcct
cctggtaccctgaacggagagctgacggggtataaattacgctacaggaaaggactcagg
agagcggacacgattgagatctccaccacacagctctttcagctcattgacggtctggag
aaaggaaaggtctacacagtgcgagtgtcggccacaaccgtgaacggaaccggaccgacg
acggagtggatcgccgccgaaaccttcgagaacgacctggacgagtctcaggttccagga
gtcccgagttctcttcacgttcgtccgctggtgaaccgaatcgtggtgagttggactcct
ccggaaaaccaggacattttagtgcgaggttataaaatcggatacggaatcggcagccct
catgcccacacggtcacgctggattacaagcagcgtttctacagcatcgataacctcgat
cccagttcccattacgtcatcaacctcaaagctttcaacaacatgggcgaaggcattccc
atttacaacagcgccacaacgaggcctcaatccgaccccatagaccctgatattgatttt
tatgaactctttaataacccgtacaccccagcacccgaccccacacccatgctgcccccg
gtgggcgttcaggccaccgtcctcagccaggacaccgtcaaagtcagctgggccgacaac
tcgctcgccaagaaccagaagatcacagactccagatattacaccatccgctggaagacc
aacatccccgccaacaccaaatataagatggcaaacaccacatctctgttccatacagta
acggctctgaagcccaacacgctttatgagttctcggttatggtgaccaagagccgcagg
agcagtacgtggagtatgacggcccaggggaccacttttgaatccattcccagctctgct
ccaaaagatgtgacggtgatcagtaaagagggaaatccacgaatcatcaacatcaactgg
caacctccgactgaagccaatggcaaaatcacagggtacatcatctactacagcaccgat
gtgaaagctgaggtccacgattgggtcgtggagcccgtggtgggaaacagactgacccat
cagattcagggtctgacgctggacaccgcatattacttcaagatccaggccagaaactcc
aaaggcatggggccaatgtcagacgcggtgcagttccgcaccccgaaagctgaaccgtca
gacaaaatgtcaagtgatcaagggctgcaagtcaaacccggtcacccgaccctaccggag
cacgggattggatccaacatggataaaccaggcatcacgggcagccaggagaatcacatt
ctggtgatcgtggtgattgtgtctgttggcgtgttcactatcatcgctgtggtcgtgggg
gccgtcctgtgcacgcgccgctccaactcccaccagaaaaagaaacgtgctgcctgtaag
tccagcaccagctcccacaagtacaagagctcgtccaaagacctgaaacctcctgatctc
tggatccatcacgagcgtctggagctcaaacccatggacaaatcacccgaccccaacccg
gtcatgacagagacgcccatcccacgaaccgcccaggacccggccgccgagcccagccac
cagagacggggtcacgaggtggaggagagcgtgtccactttggccggtcggaggggagcg
agacccaaaatgatgatgccgttcgactctcagcctccccagcctgtgattagcgctcac
ccaatccattccctcgatcaccttcatcactatcatcatcactatcacctcccgccgcgc
ggctaccttcatcaccagatcagcctgagagcgcccgccacccccagctcattctcagac
aggcctccgtctgcagaatcagtgaggaatcagccccctgcacctgaacctccggtcgcc
cccagtcagcccagcactacagctgagatccagaagacagaggcggtgatcaaagaggaa
gagccgccgagcataaacccgcccacggcccacgttcggcccacacacccgctcaagagc
ttcgctgtgccggccgtcaccgtttccgcccataacccgcccacctatgagaccgcatta
cccagcaccccactgctggcacaaccagtgcctggcgtgaagacggcatctatcgggaca
ttaaatcgagctcgagctccaatggcagtaacagtccccagtgcacccgaccaatcagaa
accagcaagatgcttgacatgacgtatgagactgatgaactctcagaggaaatggcccac
ctggagggtctgatgaaggacctgaacgccatcaccacaggctga
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