Labeo rohita (rohu): 127157004
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Entry
127157004 CDS
T09007
Name
(RefSeq) cingulin-like protein 1
KO
K21110
cingulin-like protein 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127157004
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Gene cluster
GFIT
Motif
Pfam:
Myosin_tail_1
DUF1664
Motif
Other DBs
NCBI-GeneID:
127157004
NCBI-ProteinID:
XP_050956152
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All DBs
Position
25:complement(30941073..30960583)
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AA seq
982 aa
AA seq
DB search
MESFGAQDGRSQSDPVRASQDDSGSFGVQVQVQGISGRPYVVLNAQGRRVPRSPEYPDVF
LAEHRRQEFVSNMSGGASSTQTPRPDHHRSLRVFKNPSVQLLNYQRNPEILKPYDPRNSR
GWCSSPSSPVMVKRARIPVPGAGRDRVQEPAVESVPCQPSHIICRMSVPASETYDTGTAS
AGSPRTGRVGHRGRIAPEEKRRSRSLESRSDGIRTEVGGFAQSGQGERSEVNEENGSGQA
TPDLLKGRRELPDQPDEETAKLVMVNYLKDGSCEGEAVIRQRVELMFDKIHMLKFRALEE
FAFAAPLEEVNDLKDRRAALERHVSLLQQQLQEAKQDSDGLSEEKEETNAELKRLQEALE
RSEQEQITLRHKLTDMEKELQTSLDQLLQARRARDQCRSDMRDLQQQLSDIHDELDSAKS
CEAGERDRLLQDLSELRGEFEALQRVQEEQEEALHRRDRELTALRGALEEEISAHARDVE
ALQEEHQQEIHRLLEATQEAKESVALLGQKVLEVAAEKGAGQTLIAELKQTKAELQLKIS
ALEEQISSLDHLIQQKQEQEKLLTERVEQLTMEKRNLEEELQEVRQQEDDMCGANRALMR
HLEDTQGELSRLTRAHRELKERFEEERRRTEELQRRRSELEEERRSQDRVLERLHDEMSA
AVTGSEQETQRLQEEVDVLRDQSQRDLDTLHTQLHNTHTQLQTHTHAAQEYQRERCVLEE
KLSRCEFDLNEAELKSQQLQKRIKELEEKRHTHDDRHSKLMEVRVCELERCVSEERSSSD
ALMKRLERGREQMEQVRAELLQERAARHELECDKIRLERQNKDLRGRVSQLEGSQRLGQD
AVVSELQLHVQELEERLLGEEKEKSDLQQLNRRLERRMKELTLHLEEEKLSLQDQRDQLA
LRLKTLKRQLDEAEEEIERLENSRKKLQRDVEEQQEISDQLKTEICGLRNHIRRNTRPNK
AQSSADEDDVEEDEDETDASLK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgttcggcgctcaggatgggcgatctcagtctgaccctgttcgggcgtctcag
gacgattcgggatcgtttggggtccaagtccaggtccagggcatctccggccggccgtac
gtggtcctgaacgctcaggggagacgcgtgccacgttctcccgagtatcccgacgtcttc
ctcgcggagcatcggcggcaggagtttgtgtccaatatgagcggcggcgcttcaagcact
caaacccctcgaccggatcatcacagatctcttagagtcttcaagaacccttcggtccag
ctgctgaactaccagaggaaccctgagatcctgaaaccctacgatcccagaaacagccgc
ggctggtgcagcagcccttcctcgcccgtgatggtgaagagagccaggatcccggtgccg
ggagcgggtcgggaccgagtccaggagccggcggtagagagcgttccctgccagccgtct
catatcatctgcaggatgtccgtacccgcctccgagacgtacgacaccgggacggccagc
gcaggatcccctcggaccggccgagtcggtcaccgcggcagaatcgcgcctgaggagaag
aggcgctccagaagtctggagtccaggtcggacgggatcagaacggaagtcggcggcttc
gcgcagtcagggcagggggagaggtcagaggtcaacgaggagaacggcagcggacaggcc
acacctgaccttctgaaaggacgccgagagcttccggatcagcccgatgaggaaaccgca
aaactggtgatggttaactacctgaaagacgggtcctgtgagggtgaagccgttatcagg
cagagggtggagctcatgtttgacaagatccacatgttgaagttcagagcgctggaggag
tttgcgttcgcagctcctctggaggaggtgaatgatcttaaagacagaagggcggcgcta
gagagacacgtcagtctcttacagcagcagctgcaggaggccaagcaggacagcgacggt
ttgtcagaggagaaagaggagacaaacgcagagctgaagagactgcaggaggcgctagag
aggagcgaacaggagcagatcacactccgccacaagctcacggacatggagaaagagctg
cagacatcactggaccaactcctgcaggccagaagggctcgtgatcagtgtcgttctgat
atgagggatctgcagcagcagctgtctgacatccacgatgagttagacagcgctaagagc
tgcgaggctggagagagagacagactgctgcaggatctgtctgagttgcgcggggagttc
gaggccctgcagcgagtgcaggaggagcaggaggaggcgctacaccggcgggacagggag
ctgacggccctgcggggggcgctagaggaggagatctccgctcacgccagagacgtggag
gcgctgcaggaggagcaccagcaggagatccacagactcctggaagccacacaggaggcc
aaagagagcgtggctctgctgggtcagaaggttctggaggtggcggcagagaaaggagcc
ggtcagacgctgatcgctgagctgaagcagactaaagcagagctccagctgaagatcagc
gctctggaggagcagatctcctccctcgaccacctcatccagcagaagcaggagcaggag
aagctcctcacagaacgtgtggagcagctgacgatggagaaacggaatctggaggaggag
ctgcaggaggtccgacagcaggaggacgacatgtgtggagccaaccgagccctgatgaga
cacctggaggacacgcagggtgagctgagcaggttgactcgagctcatcgcgagctgaag
gagcggttcgaggaggagcgccgtcggactgaggaactgcagaggagacgcagtgagtta
gaggaggagaggaggagccaggaccgagtgttagagcgactgcacgacgagatgagtgcg
gcggtgacgggatcagagcaggagacgcagaggctgcaggaggaggtggacgtgctcaga
gatcagagccagagagatctggacacgctacacacacagctacacaacacacacacacaa
ctacagacacacacacacgccgcacaggaataccagagagagcggtgtgtgttagaggag
aaactctctcgctgtgagtttgatctgaatgaggctgaactgaaatctcagcagctgcag
aagagaataaaagagctggaggagaaacgacacacacacgacgacagacacagcaaactc
atggaggtgcgagtgtgtgagctggagcggtgtgtatcagaggagcgcagcagctcagac
gcgctcatgaagagactggaacgaggacgagagcagatggagcaggtgagagctgaactg
ctgcaggaacgagccgctcgacacgagctggaatgtgacaaaatccgtctggagcgacag
aataaggatctgcggggccgcgtgtcgcagctggagggatctcagcgcctcggtcaggac
gccgtcgtctccgaactgcagctccacgtgcaggagctggaggagaggctgctgggagag
gagaaggagaagagcgacctgcagcagctgaaccgcaggctggagcgccgcatgaaggag
ctgacgctgcatctggaggaggagaagctctcgctgcaggaccagagagatcagctggct
ctgcgactaaaaaccctgaagcgtcagctggacgaggccgaggaggagatcgagaggctg
gagaacagccggaagaagctgcagagagacgtggaggagcagcaggagatcagcgatcag
ctgaagacagagatctgcggcctccgcaatcacatcaggcgcaacacgagacccaataaa
gcacagagttcagctgatgaagatgatgtggaggaggatgaagatgagactgatgcatca
ctaaaataa
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