Labeo rohita (rohu): 127157122
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Entry
127157122 CDS
T09007
Symbol
met
Name
(RefSeq) hepatocyte growth factor receptor isoform X1
KO
K05099
proto-oncogene tyrosine-protein kinase Met [EC:
2.7.10.1
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04020
Calcium signaling pathway
lroh04510
Focal adhesion
lroh04520
Adherens junction
lroh05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127157122 (met)
04020 Calcium signaling pathway
127157122 (met)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127157122 (met)
04520 Adherens junction
127157122 (met)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
127157122 (met)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lroh01001
]
127157122 (met)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
127157122 (met)
Protein kinases [BR:
lroh01001
]
Receptor tyrosine kinases (RTK)
MET family
127157122 (met)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
TIG
Sema
PSI
Kinase-like
Pkinase_fungal
Beta-sand_ComC_2nd
Motif
Other DBs
NCBI-GeneID:
127157122
NCBI-ProteinID:
XP_050956325
LinkDB
All DBs
Position
25:complement(14183002..14248547)
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AA seq
1381 aa
AA seq
DB search
MRIHYSEATSILIILQTLWWGLNSQCEEPIESSKLDLSVTYDLPHFVSDTPIQKLLEFNG
TVYVGAVNKLYALSKDLKKIHEYNTGPVYEGRDCSAPDPCSGCNNKPINSNNTNMALLME
TFYDLELFSCGSVGNGVCRRYLLEDGPLDAEVTCMYSMKNKDSSHGCPDCLAGPSGTQIL
NVMSSGVVRFFVANSEPLDLSVPRLHHTISVRKMRETQDGFEFFSDQSYMDLAPGLRGNY
PLHYVYSFQSGPYVYFLTVQREGGSSNAFHTRIVRMCSSDPEILRYVEMPFECIYSERRR
KKRSAQVVFNVLQAAHVAKVGYDFQQEMGLKEGEDVLFAAFARSKPDSPEPTASSAVCLI
SITDINNFFRDFMQKGYTRKLSHFPGSEEKNFNQSFTGDSFGCGKHERGYRLEVTSTNPR
RDYFHGRFRNVLLTSIAVVPIKNHTVVSLGTAEGRIIQVVVSRFGKTEPHVDFRLDTLPV
SSEMALLSPQRHDGSLLLVTGNKVSKVPLIGPGCEQLWSCSSCLLAPGFMGCGWCKSSDR
CTRAPQCSPSLWIQDSCPLLITTISPSSAPLGGHTNVTICGKNFGFNKKDRFDTKLIDVV
VAGTKCKLERKDSSNNRLVCGLDHVNAFSADSVVRVRSGKEQAQKDGFSFVNPIITEIFP
EFGPKSGGTMLTITGSFLDSGNMQQVTMGNATCVVHSISATMLTCRTPPQPSPSQHKVQL
HIDGVIREAPVSYTYNENPHISSVQPKHSFISGGSTVTVNGFYLHSALQPQMVLTAATEG
KLFQVTCSHDEDKRNILCITPSLKGLSVQPPVATKMTFVLDGFSTDQYDLLYVEDPKFEE
FQKPTVTPRGNKNILEIKVPPVNQEAVKNGEVLRVSNRTCESVTLVGNTLECTVPMELQS
AAKELEVEWKQATSSVILGRVVLAQDQDYRILITGGVCVSILLLLLIAVFVWIKRKKHID
DLAKAMVWYDGRAHIPHLDMLANARSVSPTNEMVSHESVDYRTTLLEDQNLPLSQTESCR
PHLYAHAHVDLSPMLGPMEGDLASPLLPSSAPIDLGSLHPELLKEVQHVVIAREDLLLHV
NEIIGRGHFGCVFHGTLLEPDGQKQHCAVKSLNRITDIEEVSQFLKEGIIMKDFSHPNVL
SLLGICLPSEGSPLVVLPYMKHGDLRNFIRDETHNPTVKDLMGFGLQVAKGMEYLASKKF
VHRDLAARNCMLDESYTVKVADFGLARDVYDKEYYSVHNKHGVKLPVKWMALESLQTHKF
TTKSDVWSFGVLLWELMTRGAPPYSDVNSFDITIFLLQGRRLLQPEFCPDALYNVMIECW
HPKPERRPTFSELVSRIAAIFSSFSGEHYILLNTTYVNIDKMTPYPSLISSQSNLDRDCC
T
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgagaattcactattctgaagccacttccatcctcatcatccttcagacgttgtggtgg
ggcttgaatagtcaatgtgaggaaccaatagagagctccaaactcgacctctctgtgacc
tatgacctccctcactttgtgtctgacactcccatccagaagctgttggaattcaatgga
actgtgtatgttggtgccgtcaacaaactttacgctctgtcaaaagacctcaaaaagata
cacgagtacaatacgggacctgtttatgagggtcgagactgcagtgcaccagatccatgc
agcggttgcaacaacaaacccattaactcgaacaacaccaacatggccctgttgatggag
actttttatgatcttgagctcttcagctgcggctcagttgggaacggcgtctgccgtcgt
tacttattagaggatggaccactggatgcggaagttacttgcatgtattcaatgaagaac
aaagacagcagccacggctgcccagactgcttggcaggaccttcgggcactcagatcctt
aacgtgatgagcagcggcgtcgtgaggttcttcgtcgcaaactctgagcctcttgatttg
tccgtcccacgtctccaccacactatctccgttagaaagatgcgagagactcaagacggc
tttgagttcttttctgaccaatcctacatggacttagccccagggttgcgtggaaactac
ccgctgcactatgtctactccttccagagtggcccatatgtgtattttctgaccgtccaa
cgagaaggtggcagctcaaacgccttccacactcggatcgtacgcatgtgctcttcagat
cctgaaatcctgcgctatgtagaaatgccttttgagtgcatttactccgagagaagaaga
aagaagcgctcggctcaagtggttttcaatgttctccaggctgcacatgtggcaaaggtc
ggctatgactttcagcaggagatggggctgaaagaaggcgaggacgtgctgtttgctgcc
ttcgcccggagcaaacccgactcacccgagcccacggccagctctgccgtctgccttatc
tccatcacagacatcaataacttcttcagggatttcatgcagaagggatacacgaggaag
ctcagtcactttccaggatcagaggagaaaaacttcaaccagagcttcacaggagattcc
ttcggctgtggcaaacatgaaagaggctaccgactggaggttacaagcaccaacccgcgc
cgcgactacttccacggacgcttccggaacgttcttctcacttccatagccgtggtgcct
atcaagaaccacactgtggtcagcctaggcacagctgagggccgcatcatccaggtggtg
gtttcccgctttggcaagacggagccgcatgtggatttccgcttggacacgctccccgtg
tcctccgagatggccctactgtctccacagcgtcacgacggctccttattgttggttaca
ggaaacaaggtctctaaggttcctctaataggccctggatgtgagcagctgtggtcttgt
agctcctgtctcctggctccaggcttcatgggctgcggatggtgcaagagcagcgatcgc
tgcacgagggctcctcagtgctccccctccctttggatccaggactcctgccccctcctc
atcaccacgatctctccttcctctgctccactcggaggccacaccaacgtgacaatctgt
ggcaaaaacttcggattcaataagaaagatcgcttcgataccaaactgatcgatgtggtg
gttgctggaacaaagtgtaaactggaaaggaaagacagcagcaataatcggttggtctgc
ggactggatcatgtgaacgcgttcagcgctgactctgtggttagggtgcgcagtggcaaa
gaacaggcccaaaaagatggtttctcatttgtgaacccaattatcacagagatcttccca
gagtttggacccaagtctggcggaacgatgctcactatcactggttcattcctggatagt
ggaaatatgcaacaggtcaccatgggcaacgctacctgtgtggtgcacagtatttcagcc
acgatgctgacatgtcggacaccccctcagccatcaccgtcccagcacaaggtacagctg
cacattgatggagtgattcgtgaagctcctgtcagctacacctacaacgagaacccacac
atctccagcgtccagcccaagcattccttcatcagtggaggaagcacggtgacagtcaat
ggtttctaccttcactcagccctccaacctcagatggttctcactgccgccacagagggc
aaactcttccaagtgacctgcagtcatgatgaggataagcgaaatatcctttgtatcaca
ccctccctgaaaggcctcagcgttcagcctccagttgccacaaaaatgaccttcgtgtta
gacggtttctccaccgatcagtacgacctactgtatgttgaagaccccaagttcgaggag
tttcagaagcccacagttacaccgagaggcaacaagaacattctggagattaaggtcccc
cctgtcaatcaggaggcggttaaaaatggtgaggtgctgagagtttcaaaccggacctgt
gagagcgtcactttggtgggcaacacgctcgaatgcaccgtacccatggagctccagtcg
gccgccaaagagctggaggtggagtggaagcaggccacatcatctgtgatcctaggtcgt
gtggtgttggctcaagaccaggactacaggatactgatcacaggaggagtgtgtgtatcc
atccttctactgcttcttatcgcagtctttgtttggatcaaaaggaagaagcacattgat
gatttagctaaggctatggtttggtatgacggccgggctcacattccgcacttggacatg
ttggcaaacgcgaggagtgtcagtccgactaatgaaatggtctctcacgagtcggtggac
tatagaaccactttgcttgaggaccaaaacttgcccctgtctcagacagagtcctgccgg
cctcatctctacgcccatgcccatgtggatctgtcccctatgctcggcccgatggaaggg
gacctggcgtctccactgttgccctctagtgcgcccatagatctaggcagcctccatccg
gagctgctgaaggaagtgcagcacgtggtcatcgcccgggaagatctgctcctacatgtg
aatgagatcattgggagagggcactttggctgcgtgttccacggaaccctgctcgaacca
gatggccagaagcagcactgcgccgtcaagtccttaaaccgaatcaccgatatagaagag
gtgtcccagttcctgaaggagggcatcatcatgaaagacttcagccatcctaatgtgctc
tctttgctgggaatctgcttgcccagcgagggctctcctctcgtcgtgttgccgtacatg
aagcacggagatctacgcaacttcatcagagatgaaactcacaaccccacagtgaaggac
ctgatgggtttcggactgcaggtggctaaaggaatggaatatctcgccagcaagaagttt
gtacacagagacctcgcggccagaaactgcatgctggatgagagctacaccgtaaaagtg
gctgattttggcctggccagagatgtgtatgataaagaatactacagtgtgcacaacaag
cacggggtcaagctgcccgtcaaatggatggcgttagaaagcctacagacgcacaagttc
accaccaagtctgatgtgtggtcgttcggcgtgttgctgtgggaactcatgacccgaggc
gccccgccttactccgatgtgaactccttcgacatcactatcttccttctgcaaggacga
agactgttacagccagagttctgcccggacgcactatataatgtcatgatcgagtgctgg
caccccaaacccgagcggcggcccaccttctcagagctcgtgtcccgcatcgccgcaatc
ttctccagcttcagcggcgagcactacatcctccttaacaccacctacgtcaatatcgat
aagatgacgccctacccctctctcatctcctctcagagtaacctggaccgtgactgctgc
acctga
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