Labeo rohita (rohu): 127157122
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Entry
127157122 CDS
T09007
Symbol
met
Name
(RefSeq) hepatocyte growth factor receptor isoform X1
KO
K05099
proto-oncogene tyrosine-protein kinase Met [EC:
2.7.10.1
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04020
Calcium signaling pathway
lroh04510
Focal adhesion
lroh04518
Integrin signaling
lroh04520
Adherens junction
lroh05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127157122 (met)
04020 Calcium signaling pathway
127157122 (met)
09133 Signaling molecules and interaction
04518 Integrin signaling
127157122 (met)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127157122 (met)
04520 Adherens junction
127157122 (met)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
127157122 (met)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lroh01001
]
127157122 (met)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
127157122 (met)
Protein kinases [BR:
lroh01001
]
Receptor tyrosine kinases (RTK)
MET family
127157122 (met)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
TIG
Sema
PSI
Kinase-like
Pkinase_fungal
Beta-sand_ComC_2nd
Motif
Other DBs
NCBI-GeneID:
127157122
NCBI-ProteinID:
XP_050956325
LinkDB
All DBs
Position
25:complement(14183002..14248547)
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AA seq
1381 aa
AA seq
DB search
MRIHYSEATSILIILQTLWWGLNSQCEEPIESSKLDLSVTYDLPHFVSDTPIQKLLEFNG
TVYVGAVNKLYALSKDLKKIHEYNTGPVYEGRDCSAPDPCSGCNNKPINSNNTNMALLME
TFYDLELFSCGSVGNGVCRRYLLEDGPLDAEVTCMYSMKNKDSSHGCPDCLAGPSGTQIL
NVMSSGVVRFFVANSEPLDLSVPRLHHTISVRKMRETQDGFEFFSDQSYMDLAPGLRGNY
PLHYVYSFQSGPYVYFLTVQREGGSSNAFHTRIVRMCSSDPEILRYVEMPFECIYSERRR
KKRSAQVVFNVLQAAHVAKVGYDFQQEMGLKEGEDVLFAAFARSKPDSPEPTASSAVCLI
SITDINNFFRDFMQKGYTRKLSHFPGSEEKNFNQSFTGDSFGCGKHERGYRLEVTSTNPR
RDYFHGRFRNVLLTSIAVVPIKNHTVVSLGTAEGRIIQVVVSRFGKTEPHVDFRLDTLPV
SSEMALLSPQRHDGSLLLVTGNKVSKVPLIGPGCEQLWSCSSCLLAPGFMGCGWCKSSDR
CTRAPQCSPSLWIQDSCPLLITTISPSSAPLGGHTNVTICGKNFGFNKKDRFDTKLIDVV
VAGTKCKLERKDSSNNRLVCGLDHVNAFSADSVVRVRSGKEQAQKDGFSFVNPIITEIFP
EFGPKSGGTMLTITGSFLDSGNMQQVTMGNATCVVHSISATMLTCRTPPQPSPSQHKVQL
HIDGVIREAPVSYTYNENPHISSVQPKHSFISGGSTVTVNGFYLHSALQPQMVLTAATEG
KLFQVTCSHDEDKRNILCITPSLKGLSVQPPVATKMTFVLDGFSTDQYDLLYVEDPKFEE
FQKPTVTPRGNKNILEIKVPPVNQEAVKNGEVLRVSNRTCESVTLVGNTLECTVPMELQS
AAKELEVEWKQATSSVILGRVVLAQDQDYRILITGGVCVSILLLLLIAVFVWIKRKKHID
DLAKAMVWYDGRAHIPHLDMLANARSVSPTNEMVSHESVDYRTTLLEDQNLPLSQTESCR
PHLYAHAHVDLSPMLGPMEGDLASPLLPSSAPIDLGSLHPELLKEVQHVVIAREDLLLHV
NEIIGRGHFGCVFHGTLLEPDGQKQHCAVKSLNRITDIEEVSQFLKEGIIMKDFSHPNVL
SLLGICLPSEGSPLVVLPYMKHGDLRNFIRDETHNPTVKDLMGFGLQVAKGMEYLASKKF
VHRDLAARNCMLDESYTVKVADFGLARDVYDKEYYSVHNKHGVKLPVKWMALESLQTHKF
TTKSDVWSFGVLLWELMTRGAPPYSDVNSFDITIFLLQGRRLLQPEFCPDALYNVMIECW
HPKPERRPTFSELVSRIAAIFSSFSGEHYILLNTTYVNIDKMTPYPSLISSQSNLDRDCC
T
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgagaattcactattctgaagccacttccatcctcatcatccttcagacgttgtggtgg
ggcttgaatagtcaatgtgaggaaccaatagagagctccaaactcgacctctctgtgacc
tatgacctccctcactttgtgtctgacactcccatccagaagctgttggaattcaatgga
actgtgtatgttggtgccgtcaacaaactttacgctctgtcaaaagacctcaaaaagata
cacgagtacaatacgggacctgtttatgagggtcgagactgcagtgcaccagatccatgc
agcggttgcaacaacaaacccattaactcgaacaacaccaacatggccctgttgatggag
actttttatgatcttgagctcttcagctgcggctcagttgggaacggcgtctgccgtcgt
tacttattagaggatggaccactggatgcggaagttacttgcatgtattcaatgaagaac
aaagacagcagccacggctgcccagactgcttggcaggaccttcgggcactcagatcctt
aacgtgatgagcagcggcgtcgtgaggttcttcgtcgcaaactctgagcctcttgatttg
tccgtcccacgtctccaccacactatctccgttagaaagatgcgagagactcaagacggc
tttgagttcttttctgaccaatcctacatggacttagccccagggttgcgtggaaactac
ccgctgcactatgtctactccttccagagtggcccatatgtgtattttctgaccgtccaa
cgagaaggtggcagctcaaacgccttccacactcggatcgtacgcatgtgctcttcagat
cctgaaatcctgcgctatgtagaaatgccttttgagtgcatttactccgagagaagaaga
aagaagcgctcggctcaagtggttttcaatgttctccaggctgcacatgtggcaaaggtc
ggctatgactttcagcaggagatggggctgaaagaaggcgaggacgtgctgtttgctgcc
ttcgcccggagcaaacccgactcacccgagcccacggccagctctgccgtctgccttatc
tccatcacagacatcaataacttcttcagggatttcatgcagaagggatacacgaggaag
ctcagtcactttccaggatcagaggagaaaaacttcaaccagagcttcacaggagattcc
ttcggctgtggcaaacatgaaagaggctaccgactggaggttacaagcaccaacccgcgc
cgcgactacttccacggacgcttccggaacgttcttctcacttccatagccgtggtgcct
atcaagaaccacactgtggtcagcctaggcacagctgagggccgcatcatccaggtggtg
gtttcccgctttggcaagacggagccgcatgtggatttccgcttggacacgctccccgtg
tcctccgagatggccctactgtctccacagcgtcacgacggctccttattgttggttaca
ggaaacaaggtctctaaggttcctctaataggccctggatgtgagcagctgtggtcttgt
agctcctgtctcctggctccaggcttcatgggctgcggatggtgcaagagcagcgatcgc
tgcacgagggctcctcagtgctccccctccctttggatccaggactcctgccccctcctc
atcaccacgatctctccttcctctgctccactcggaggccacaccaacgtgacaatctgt
ggcaaaaacttcggattcaataagaaagatcgcttcgataccaaactgatcgatgtggtg
gttgctggaacaaagtgtaaactggaaaggaaagacagcagcaataatcggttggtctgc
ggactggatcatgtgaacgcgttcagcgctgactctgtggttagggtgcgcagtggcaaa
gaacaggcccaaaaagatggtttctcatttgtgaacccaattatcacagagatcttccca
gagtttggacccaagtctggcggaacgatgctcactatcactggttcattcctggatagt
ggaaatatgcaacaggtcaccatgggcaacgctacctgtgtggtgcacagtatttcagcc
acgatgctgacatgtcggacaccccctcagccatcaccgtcccagcacaaggtacagctg
cacattgatggagtgattcgtgaagctcctgtcagctacacctacaacgagaacccacac
atctccagcgtccagcccaagcattccttcatcagtggaggaagcacggtgacagtcaat
ggtttctaccttcactcagccctccaacctcagatggttctcactgccgccacagagggc
aaactcttccaagtgacctgcagtcatgatgaggataagcgaaatatcctttgtatcaca
ccctccctgaaaggcctcagcgttcagcctccagttgccacaaaaatgaccttcgtgtta
gacggtttctccaccgatcagtacgacctactgtatgttgaagaccccaagttcgaggag
tttcagaagcccacagttacaccgagaggcaacaagaacattctggagattaaggtcccc
cctgtcaatcaggaggcggttaaaaatggtgaggtgctgagagtttcaaaccggacctgt
gagagcgtcactttggtgggcaacacgctcgaatgcaccgtacccatggagctccagtcg
gccgccaaagagctggaggtggagtggaagcaggccacatcatctgtgatcctaggtcgt
gtggtgttggctcaagaccaggactacaggatactgatcacaggaggagtgtgtgtatcc
atccttctactgcttcttatcgcagtctttgtttggatcaaaaggaagaagcacattgat
gatttagctaaggctatggtttggtatgacggccgggctcacattccgcacttggacatg
ttggcaaacgcgaggagtgtcagtccgactaatgaaatggtctctcacgagtcggtggac
tatagaaccactttgcttgaggaccaaaacttgcccctgtctcagacagagtcctgccgg
cctcatctctacgcccatgcccatgtggatctgtcccctatgctcggcccgatggaaggg
gacctggcgtctccactgttgccctctagtgcgcccatagatctaggcagcctccatccg
gagctgctgaaggaagtgcagcacgtggtcatcgcccgggaagatctgctcctacatgtg
aatgagatcattgggagagggcactttggctgcgtgttccacggaaccctgctcgaacca
gatggccagaagcagcactgcgccgtcaagtccttaaaccgaatcaccgatatagaagag
gtgtcccagttcctgaaggagggcatcatcatgaaagacttcagccatcctaatgtgctc
tctttgctgggaatctgcttgcccagcgagggctctcctctcgtcgtgttgccgtacatg
aagcacggagatctacgcaacttcatcagagatgaaactcacaaccccacagtgaaggac
ctgatgggtttcggactgcaggtggctaaaggaatggaatatctcgccagcaagaagttt
gtacacagagacctcgcggccagaaactgcatgctggatgagagctacaccgtaaaagtg
gctgattttggcctggccagagatgtgtatgataaagaatactacagtgtgcacaacaag
cacggggtcaagctgcccgtcaaatggatggcgttagaaagcctacagacgcacaagttc
accaccaagtctgatgtgtggtcgttcggcgtgttgctgtgggaactcatgacccgaggc
gccccgccttactccgatgtgaactccttcgacatcactatcttccttctgcaaggacga
agactgttacagccagagttctgcccggacgcactatataatgtcatgatcgagtgctgg
caccccaaacccgagcggcggcccaccttctcagagctcgtgtcccgcatcgccgcaatc
ttctccagcttcagcggcgagcactacatcctccttaacaccacctacgtcaatatcgat
aagatgacgccctacccctctctcatctcctctcagagtaacctggaccgtgactgctgc
acctga
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