KEGG   Labeo rohita (rohu): 127157132
Entry
127157132         CDS       T09007                                 
Symbol
itga11b
Name
(RefSeq) integrin alpha-11
  KO
K06587  integrin alpha 11
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04510  Focal adhesion
lroh04512  ECM-receptor interaction
lroh04810  Regulation of actin cytoskeleton
lroh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127157132 (itga11b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127157132 (itga11b)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127157132 (itga11b)
   04810 Regulation of actin cytoskeleton
    127157132 (itga11b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lroh04515]
    127157132 (itga11b)
Cell adhesion molecules [BR:lroh04515]
 Integrins
  Integrin alpha subunits
   127157132 (itga11b)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_1 Integrin_A_Ig_2 VWA_2 FG-GAP_3
Other DBs
NCBI-GeneID: 127157132
NCBI-ProteinID: XP_050956341
LinkDB
Position
25:27456489..27520388
AA seq 1186 aa
MEYSYILLLWITALMPGRWTCFNIDTRHAKIIKGSKEAQFGYTVQQHEADGRKWLLVGAP
FESNGKHQTGDVYRCPLDGKRTTNCTRLHLGKISLNNVSERKEKMRLGMTLTSNPKDNSF
VACGPLWSYECGSSYYSTGICSRVNSSFDFTHSIAPAYQRCETYMDIVIVLDGSNSIYPW
YEVQDFLINVLQKFYIGPGQIQVGVVQYGERVVNEFRLDDFRTVEEVVAAAKNIDQRGGE
ETRTALAISEARSKAFKRGGRPDAKKVMIVITDGESHDSPDLRKAVEESEKDNITLYGIA
VLGYYNRRGINPEAFLREIKFIATDPEEHFFSVTDESALKDIVDALGEKIFSLEGTNQNG
TAFGLQMSQAGFSSHIVEDGILVGAVGAYDWNGAVLKETSHGKVIPPKSSYMKEFPEELK
NHGAYLGYMVSSVVSAQHGQLYIAGAPRFNHTGKVVIFTLTNSGNLTILYSLYGQQIGSY
YGSELAPIDLDGNGLTDLLLVGAPMYFYKGWEKGRVYIYTISLQGSFIPDGTLGPSEKTH
DSRFGAAMSTLPDLNGDGFSELVVGAPLEDNHKGAIYLFYGQQNNIQPKYKQRIAAGDIS
PGLRYFGRSVHGMMDLNGDKLIDLSIGTLGAAVLLWSRSVIRVGISVHFEPSKINVFNKD
CNRGGREVSCMLATVCLNVTARTPMTDPKTVALRYSFGFEENGYFPRAVLDSTEDPQPRD
VTLRPDSDYCQKVYFHVHEVTDYTRPLIFTVNVGLQNADEGPVLDDGWPTSLQSELPFWN
GCDNDDQCVPNLVLQSNSDLLDRRQFCGRRERSSWPPCVHQRTRTSGERLVEASRRKVLV
EARLENRGENAYGTILHITHSPNLQFSSLVVKGPSDIAIECPNSDDTNLFRTCNVSAPFM
RSFAQVYFRLEFEFSRSAFLNYVQITLRVSSEGEEMSPEDNINDIYHNLKYEADILFTRD
SSPSRFEIKPELGQSVAVGTGPPFNLSYQIQNLGMFPISELLFSLNVFTVTRNANALLRL
SDLHIDQMAGSHCSVPRVITAGSSSQEDLSLNSHVNASTSDTLFAQCRINLLPQGDVSIT
ATGWLNLRTLLSVKFKRLDLVMTAVVELSPSSPMFLHEERPMRHIILEIRKEEDYRIPIW
VIVGSTLGGLQLLALLVLALWKLGFFHRQKRKREEQATNEKTAEDR
NT seq 3561 nt   +upstreamnt  +downstreamnt
atggagtacagttacatcctgctgctgtggatcaccgctctgatgccagggcggtggacc
tgctttaatatcgacaccagacatgcaaaaatcatcaagggttcaaaggaggctcagttt
ggatatacggttcaacaacacgaagccgatgggcggaaatggctcctggttggagctccc
tttgagagcaatggtaaacaccagacaggtgacgtctacagatgtccactagacggcaaa
cgcaccacaaactgcacaagactgcatttaggaaagatatccttgaacaacgtgtctgaa
cgtaaagagaaaatgaggctgggaatgactctcacctccaacccgaaagacaacagcttt
gtggcatgtggaccattgtggtcatacgaatgtggaagttcatactacagcacaggcatc
tgttcaagagtcaacagcagcttcgatttcacccacagcattgctccagcctatcaaaga
tgcgaaacctacatggacatagtgattgtgttagatgggtccaactccatctacccctgg
tatgaggttcaagatttcctgataaatgtgctacagaagttttacatcggtccaggacag
atccaggttggggtggtccagtacggtgagagagtggtgaacgagtttcgtctggatgat
ttccgtacggttgaggaagttgttgcagcagctaagaatatcgaccagcgaggcggagaa
gaaacacggacggctctcgcgatcagtgaggctcgatctaaagcattcaaacgcggaggt
cgcccagatgctaagaaagtcatgattgtcatcaccgatggagaatcgcacgacagccca
gacctacggaaagccgtggaagaaagcgagaaggataatatcacgttgtatggtattgcg
gttcttggctactataaccggcgagggatcaatcctgaagcttttctgagggaaatcaag
ttcatcgccaccgatcccgaggagcacttcttcagcgtcactgacgagtctgccctgaag
gatattgttgatgctctgggagagaagatcttcagcttggagggcaccaatcagaatggt
acggcctttggtttgcagatgtctcaagctggattctcgtcacatattgttgaggacggg
attcttgttggtgccgttggggcatacgactggaacggagctgttctgaaggagaccagt
catggtaaagttatcccacccaagtcctcgtacatgaaagagttcccagaggaactgaag
aaccacggagcttacctggggtacatggtgtcatccgtggtctcggctcagcatggacag
ctgtacattgctggagcccctcgattcaatcacacagggaaagtcgtcatcttcacgcta
accaacagcggcaaccttaccatactgtactcactctacggacagcagatcggatcgtat
tatggaagtgagctggcaccaattgatctggatggcaatggattgacggatcttttactg
gtgggagctcccatgtacttctacaaagggtgggagaaaggcagagtttacatctacacc
atcagcttacagggctcttttataccagatgggactcttgggccgtcagaaaagacccat
gattcccggtttggcgcggctatgtccacccttccggacttgaatggtgacggcttcagt
gagttagtagtgggcgcaccactggaggacaatcacaagggagccatctatctgttctat
ggccaacaaaacaacattcaacccaaatacaaacagaggatagccgctggtgacatctct
ccaggtctccgttatttcgggcgcagtgttcatgggatgatggatttgaatggagataag
ctcatagatctgtccataggcactttaggggccgcggttctgctttggtctcgcagtgtc
atccgcgtagggatcagcgttcattttgagccttcaaaaatcaatgtttttaataaagac
tgcaaccgaggaggtcgagaggtgtcgtgtatgttggccaccgtttgcctgaacgtcact
gcgcggacaccgatgacggatccaaaaacagtcgcactgaggtacagttttggtttcgag
gagaacggttatttccccagagccgtgttagacagcactgaagacccgcagcccagagat
gtcaccctgcggccagactcagattactgccagaaagtgtacttccacgttcatgaagtg
acagactacacacgacccctgatcttcactgttaacgtcggcctgcaaaacgcagatgaa
gggccggtgctggacgacgggtggcccaccagcctgcagtcggagcttccgttctggaac
ggttgtgataatgacgatcagtgcgttcccaacctcgtcctgcagagcaactctgaccta
ttagatcgcaggcagttctgcgggcgtcgcgaacgttcctcgtggccgccgtgtgtccat
cagaggacgaggacgagcggcgagcgtctggtggaggccagccggagaaaagttctggtg
gaggcgcgtttagagaaccgaggagagaacgcgtacggcacgatcctgcacatcacgcat
tctccaaacctccagttctccagtctggtggtgaagggaccttcggacattgcaatcgag
tgtccgaactctgacgatacgaatctgttccgaacctgcaacgtcagtgcgccattcatg
aggtcatttgctcaggtgtattttcgactggagtttgagttcagcagatctgccttcttg
aactacgtccagatcaccctcagggtctccagtgaaggtgaagaaatgtctccagaggac
aacatcaatgacatatatcataatctgaaatatgaggctgatattctctttacaagggat
tccagcccgtcccgtttcgagatcaaacctgagcttggccagagcgtcgctgttgggacc
ggaccgcctttcaatctctcttatcagatccagaatctcggcatgttccccatatctgag
cttctcttcagtttaaacgtcttcactgtgaccagaaacgcaaacgctctcctgcgcctc
tcagacttgcatatcgatcagatggctggctcacattgcagcgttccacgtgtcattacg
gccggttcgtcctcacaggaggatctctccctcaactcgcacgtgaacgcgtccaccagc
gacacgttatttgcacagtgtagaatcaacctgcttccccaaggagacgttagcatcacc
gcgacaggatggctcaatctgcgtactttattatccgtgaaatttaaacggttagatctg
gtaatgacggccgtagttgagttgagcccctcaagtccgatgttcctccacgaggaacga
cccatgagacatataatcctggagattaggaaggaggaagattaccgaatccccatctgg
gtgattgttgggagcacactgggaggactgcagcttctggctctgctcgtactggcgctc
tggaagctcggattcttccacaggcagaagagaaagagggaagagcaggcgaccaatgag
aaaacagcagaggatcggtaa

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