Labeo rohita (rohu): 127157132
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Entry
127157132 CDS
T09007
Symbol
itga11b
Name
(RefSeq) integrin alpha-11
KO
K06587
integrin alpha 11
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127157132 (itga11b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127157132 (itga11b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127157132 (itga11b)
04810 Regulation of actin cytoskeleton
127157132 (itga11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127157132 (itga11b)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin alpha subunits
127157132 (itga11b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
127157132
NCBI-ProteinID:
XP_050956341
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All DBs
Position
25:27456489..27520388
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AA seq
1186 aa
AA seq
DB search
MEYSYILLLWITALMPGRWTCFNIDTRHAKIIKGSKEAQFGYTVQQHEADGRKWLLVGAP
FESNGKHQTGDVYRCPLDGKRTTNCTRLHLGKISLNNVSERKEKMRLGMTLTSNPKDNSF
VACGPLWSYECGSSYYSTGICSRVNSSFDFTHSIAPAYQRCETYMDIVIVLDGSNSIYPW
YEVQDFLINVLQKFYIGPGQIQVGVVQYGERVVNEFRLDDFRTVEEVVAAAKNIDQRGGE
ETRTALAISEARSKAFKRGGRPDAKKVMIVITDGESHDSPDLRKAVEESEKDNITLYGIA
VLGYYNRRGINPEAFLREIKFIATDPEEHFFSVTDESALKDIVDALGEKIFSLEGTNQNG
TAFGLQMSQAGFSSHIVEDGILVGAVGAYDWNGAVLKETSHGKVIPPKSSYMKEFPEELK
NHGAYLGYMVSSVVSAQHGQLYIAGAPRFNHTGKVVIFTLTNSGNLTILYSLYGQQIGSY
YGSELAPIDLDGNGLTDLLLVGAPMYFYKGWEKGRVYIYTISLQGSFIPDGTLGPSEKTH
DSRFGAAMSTLPDLNGDGFSELVVGAPLEDNHKGAIYLFYGQQNNIQPKYKQRIAAGDIS
PGLRYFGRSVHGMMDLNGDKLIDLSIGTLGAAVLLWSRSVIRVGISVHFEPSKINVFNKD
CNRGGREVSCMLATVCLNVTARTPMTDPKTVALRYSFGFEENGYFPRAVLDSTEDPQPRD
VTLRPDSDYCQKVYFHVHEVTDYTRPLIFTVNVGLQNADEGPVLDDGWPTSLQSELPFWN
GCDNDDQCVPNLVLQSNSDLLDRRQFCGRRERSSWPPCVHQRTRTSGERLVEASRRKVLV
EARLENRGENAYGTILHITHSPNLQFSSLVVKGPSDIAIECPNSDDTNLFRTCNVSAPFM
RSFAQVYFRLEFEFSRSAFLNYVQITLRVSSEGEEMSPEDNINDIYHNLKYEADILFTRD
SSPSRFEIKPELGQSVAVGTGPPFNLSYQIQNLGMFPISELLFSLNVFTVTRNANALLRL
SDLHIDQMAGSHCSVPRVITAGSSSQEDLSLNSHVNASTSDTLFAQCRINLLPQGDVSIT
ATGWLNLRTLLSVKFKRLDLVMTAVVELSPSSPMFLHEERPMRHIILEIRKEEDYRIPIW
VIVGSTLGGLQLLALLVLALWKLGFFHRQKRKREEQATNEKTAEDR
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggagtacagttacatcctgctgctgtggatcaccgctctgatgccagggcggtggacc
tgctttaatatcgacaccagacatgcaaaaatcatcaagggttcaaaggaggctcagttt
ggatatacggttcaacaacacgaagccgatgggcggaaatggctcctggttggagctccc
tttgagagcaatggtaaacaccagacaggtgacgtctacagatgtccactagacggcaaa
cgcaccacaaactgcacaagactgcatttaggaaagatatccttgaacaacgtgtctgaa
cgtaaagagaaaatgaggctgggaatgactctcacctccaacccgaaagacaacagcttt
gtggcatgtggaccattgtggtcatacgaatgtggaagttcatactacagcacaggcatc
tgttcaagagtcaacagcagcttcgatttcacccacagcattgctccagcctatcaaaga
tgcgaaacctacatggacatagtgattgtgttagatgggtccaactccatctacccctgg
tatgaggttcaagatttcctgataaatgtgctacagaagttttacatcggtccaggacag
atccaggttggggtggtccagtacggtgagagagtggtgaacgagtttcgtctggatgat
ttccgtacggttgaggaagttgttgcagcagctaagaatatcgaccagcgaggcggagaa
gaaacacggacggctctcgcgatcagtgaggctcgatctaaagcattcaaacgcggaggt
cgcccagatgctaagaaagtcatgattgtcatcaccgatggagaatcgcacgacagccca
gacctacggaaagccgtggaagaaagcgagaaggataatatcacgttgtatggtattgcg
gttcttggctactataaccggcgagggatcaatcctgaagcttttctgagggaaatcaag
ttcatcgccaccgatcccgaggagcacttcttcagcgtcactgacgagtctgccctgaag
gatattgttgatgctctgggagagaagatcttcagcttggagggcaccaatcagaatggt
acggcctttggtttgcagatgtctcaagctggattctcgtcacatattgttgaggacggg
attcttgttggtgccgttggggcatacgactggaacggagctgttctgaaggagaccagt
catggtaaagttatcccacccaagtcctcgtacatgaaagagttcccagaggaactgaag
aaccacggagcttacctggggtacatggtgtcatccgtggtctcggctcagcatggacag
ctgtacattgctggagcccctcgattcaatcacacagggaaagtcgtcatcttcacgcta
accaacagcggcaaccttaccatactgtactcactctacggacagcagatcggatcgtat
tatggaagtgagctggcaccaattgatctggatggcaatggattgacggatcttttactg
gtgggagctcccatgtacttctacaaagggtgggagaaaggcagagtttacatctacacc
atcagcttacagggctcttttataccagatgggactcttgggccgtcagaaaagacccat
gattcccggtttggcgcggctatgtccacccttccggacttgaatggtgacggcttcagt
gagttagtagtgggcgcaccactggaggacaatcacaagggagccatctatctgttctat
ggccaacaaaacaacattcaacccaaatacaaacagaggatagccgctggtgacatctct
ccaggtctccgttatttcgggcgcagtgttcatgggatgatggatttgaatggagataag
ctcatagatctgtccataggcactttaggggccgcggttctgctttggtctcgcagtgtc
atccgcgtagggatcagcgttcattttgagccttcaaaaatcaatgtttttaataaagac
tgcaaccgaggaggtcgagaggtgtcgtgtatgttggccaccgtttgcctgaacgtcact
gcgcggacaccgatgacggatccaaaaacagtcgcactgaggtacagttttggtttcgag
gagaacggttatttccccagagccgtgttagacagcactgaagacccgcagcccagagat
gtcaccctgcggccagactcagattactgccagaaagtgtacttccacgttcatgaagtg
acagactacacacgacccctgatcttcactgttaacgtcggcctgcaaaacgcagatgaa
gggccggtgctggacgacgggtggcccaccagcctgcagtcggagcttccgttctggaac
ggttgtgataatgacgatcagtgcgttcccaacctcgtcctgcagagcaactctgaccta
ttagatcgcaggcagttctgcgggcgtcgcgaacgttcctcgtggccgccgtgtgtccat
cagaggacgaggacgagcggcgagcgtctggtggaggccagccggagaaaagttctggtg
gaggcgcgtttagagaaccgaggagagaacgcgtacggcacgatcctgcacatcacgcat
tctccaaacctccagttctccagtctggtggtgaagggaccttcggacattgcaatcgag
tgtccgaactctgacgatacgaatctgttccgaacctgcaacgtcagtgcgccattcatg
aggtcatttgctcaggtgtattttcgactggagtttgagttcagcagatctgccttcttg
aactacgtccagatcaccctcagggtctccagtgaaggtgaagaaatgtctccagaggac
aacatcaatgacatatatcataatctgaaatatgaggctgatattctctttacaagggat
tccagcccgtcccgtttcgagatcaaacctgagcttggccagagcgtcgctgttgggacc
ggaccgcctttcaatctctcttatcagatccagaatctcggcatgttccccatatctgag
cttctcttcagtttaaacgtcttcactgtgaccagaaacgcaaacgctctcctgcgcctc
tcagacttgcatatcgatcagatggctggctcacattgcagcgttccacgtgtcattacg
gccggttcgtcctcacaggaggatctctccctcaactcgcacgtgaacgcgtccaccagc
gacacgttatttgcacagtgtagaatcaacctgcttccccaaggagacgttagcatcacc
gcgacaggatggctcaatctgcgtactttattatccgtgaaatttaaacggttagatctg
gtaatgacggccgtagttgagttgagcccctcaagtccgatgttcctccacgaggaacga
cccatgagacatataatcctggagattaggaaggaggaagattaccgaatccccatctgg
gtgattgttgggagcacactgggaggactgcagcttctggctctgctcgtactggcgctc
tggaagctcggattcttccacaggcagaagagaaagagggaagagcaggcgaccaatgag
aaaacagcagaggatcggtaa
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