Labeo rohita (rohu): 127157143
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Entry
127157143 CDS
T09007
Symbol
hcn4l
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127157143 (hcn4l)
Ion channels [BR:
lroh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
127157143 (hcn4l)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
DNA_pol_viral_C
Motif
Other DBs
NCBI-GeneID:
127157143
NCBI-ProteinID:
XP_050956353
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All DBs
Position
25:complement(11574682..11617820)
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AA seq
1188 aa
AA seq
DB search
MDRVHSSMRKRLYSLPHQFGHKGAMTRDGEDSDKDTRRKSVKMKHLPSPSSTGSSKGVSE
AKSGDAETDVGRPFRTNVNGDCRRFRGSLSSITSRHAPDADLAEQRCLIGDASPEDDGPS
EQPGPGESEGAQGGRGDGAQQAPSEEQSSFVKLEGIDQIMPDDERLYQAGFMHRQFGAML
QPGVNKFSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWDLIMLLLMVGNLIIIPV
GITFFKDEHTPAWIVFNVVSDTFFLVDLVLNFRTGIVKEDSTEIILDPQQIKVRYLRSWF
AVDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWE
EIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVAKNKMVNDTWG
QQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCYAMFVGHATALIQSLDS
SRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILGELNEPLREEII
SFNCRKLVATMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTVGKKMYFIQHGVLTV
LTKGSKETKISDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNEVLEEYPMMRRA
FETVALDRLDRIGKRNSVLQHKVQRDLNSGVLNYQENEIIQQIVQHDRDMAHCAHLMQTP
PPAPHPAPTPSSHTPVIWAPLIQAPLQAAAATTSVAIALTRHPHLPHTLFRPPVPLLGSL
KDQPGYVKRFPTALSGAAAFGGSSSTSSQFSSCIETPILDTLRTERSSTSTPPPPSSSSL
PSTITTTVTTTTSNITESSFFPHRPLASHGSKDFNIAQLHSQPHLPQASFPGIAASLPGF
FQQGAIGGEAVQLAVPPASTLTPLIAHSVSPILTQLHSAQPNPQPTKPIQDLNKVARTAS
QSPITVSPVRPRSVIEQVPSPTSVPSQPSQIALQPDVLSQFSQEPSALASLAQYGSGNAS
PCSTPSAWSPTCQSPTVEKMRISVHSHPPSISGSQSSLLTPQTLLPPPPQSRERGGSLVD
LPSHDLSTISVSLPTPGLPEKSKPVGRGPQPPDLSHHRGSASGYSPLPSPPALMKPFSSI
PGHVVLSRQTSKLSITQTGSSGGSPAHGSSDRSTPGTPSLHPKLPSNL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggatagggtgcattcttccatgcgcaaacggctctacagcttgccacatcagtttgga
cacaagggtgctatgactcgagacggcgaagacagcgacaaggacactcggaggaaaagt
gtcaagatgaagcatcttccctcaccctcctccacggggagctcgaaaggtgtcagcgag
gccaagagcggagacgcggagaccgatgtggggagacccttcagaaccaacgtgaacggc
gactgccggaggttcagaggcagcctctcttccatcaccagtcggcatgctccagacgcg
gatctggcggagcagaggtgcctcatcggggatgcgagccccgaggacgacggtccctcg
gagcagcccggacccggggagagcgagggcgcgcagggcggtcgcggcgacggggcacaa
caggcgccctctgaagaacagtcgagtttcgtaaagttggaaggtatcgatcaaatcatg
ccggacgacgagcgcttgtaccaggcgggctttatgcacagacagtttggcgcgatgctc
caaccgggggtcaacaagttctcgcttcgaatgttcgggagcgagaaggcggtggaacgc
gagcaggaacgagtcaaatctgcaggcttttggatcattcacccatacagtgacttcagg
ttctactgggacctgatcatgctcctgttgatggtgggcaacctgatcatcatccccgta
ggcatcaccttcttcaaagatgaacacactcccgcctggatagtctttaacgtggtctct
gacacattcttcctggttgacctggtgctgaacttccgcacggggatcgtcaaagaagac
agcacggaaatcatcctggaccctcagcagatcaaggtgaggtaccttcggagctggttc
gccgtggatttcatctcctccatccctgtggattacatcttcctcatagtggagacacgc
attgactcggacttctacaagacagcacgagcgttgaggattgtgcgtttcacgaaaata
ctcagcctgcttcggctactgagactgtccagactcattagatacatccaccaatgggag
gagatttttcacatgacctacgacctggctagcgccatggtgcgcattgtgaatctcatt
ggaatgatgctgttgctgtgccactgggacggatgcttgcagttcttggtgcccatgctg
caagatttcccttcagactgctgggtggccaaaaacaaaatggtgaatgacacatggggt
cagcagtactcttacgccctgtttaaggccatgagccacatgctgtgtatcgggtatggc
atgtaccctcctgtgggcatgacggatgtgtggctgaccatcctcagcatgatcgtgggc
gcaacctgctatgccatgtttgtgggccacgcaaccgccctcattcaatcactggactcc
tcacgcaggcagtaccaggagaagtataagcaggtggagcagtacatgtccttccacaaa
cttcctgcagacatgcgccagaggattcatgattactatgagcatcgctatcaggggaag
atgttcgacgaggagagcattctgggagaattgaacgaaccactcagagaggaaatcatt
agttttaactgtcgaaagcttgtggccaccatgccgttgtttgcaaacgcggatcccaac
tttgtgacctccatgctcaccaagttacgtttcgaggtgttccagccaggagattacatt
atcagagaggggaccgtcggcaagaagatgtatttcatccaacacggtgtactaactgtt
ctgacgaagggcagcaaagagacaaagatctcagacggatcgtattttggagagatctgt
ttgctgactcgaggcagaagaacagccagcgtaagagccgacacatactgtcgtctgtac
tcgctctctgtggaccatttcaacgaggtgttggaggagtaccccatgatgcgacgcgcc
tttgagaccgtagccctcgatcggcttgaccgcataggaaagcgtaactctgtgctccag
cacaaagtccagcgggatctcaattccggagttctgaactaccaagaaaatgagatcatc
cagcagattgtacagcatgatagggatatggctcattgtgcccatctcatgcagacacct
cctccagctcctcacccagcaccgactccatcttcccacacccccgtcatctgggcacct
cttattcaggctcctctacaagctgccgcagccaccacttcagtcgccattgccctaact
cgccacccccatttgccccataccctcttccgaccccctgtcccgttacttggctcactg
aaagaccagccagggtatgtaaaaaggttcccaactgcactttcgggtgctgctgcattt
ggtggctcctcctcaaccagctcgcaattcagctcctgtatagaaaccccaattctggac
acactcaggaccgagagatcatctacctccactcctccgccaccgtcctccagctccctg
ccatccaccattacaacaacagtcaccaccaccacctccaacatcacagagtcttccttt
ttcccccatagaccccttgcctcccatggctccaaagacttcaacattgcccagcttcat
tctcaaccacaccttcctcaggcttctttccccggcattgctgcatcacttcctgggttc
ttccaacaaggggcaatcggaggagaggccgtccagcttgcagttccccctgcgtccacc
cttactcctttgatagcgcactcagtaagtcccatcctgacccagctgcattcggctcag
ccaaatcctcaaccaacaaaaccaattcaagacttaaataaagttgcaaggacagcctct
cagtctcctataacagtgtcccctgtccgccccaggagcgttattgaacaagtcccaagt
ccaacaagtgttccgtcccaaccttctcagattgctctacagccggatgtactttcccag
ttttcccaagaaccatccgctcttgcttcccttgcacaatatgggtccggaaatgcatcc
ccatgtagcacaccttcagcctggagtccgacatgccagagtcccacagtggagaagatg
agaatatccgtccacagccaccctcctagcatctctggatcccaaagttcgctccttacc
cctcagacactcttgccaccaccacctcaatcaagagaaagaggcggatctctagttgac
ctaccatcccatgacttaagcaccatttccgtgtctctccctacaccaggactacctgaa
aagtccaagccagtaggaagaggaccacaaccaccggacttatcccatcatagaggatct
gcttcaggttactcgccgctcccatcaccccctgcccttatgaaaccatttagctcaata
cctggtcacgttgtcctttcgagacaaacttccaagttgtccataactcagactgggtcc
tcaggtgggtcaccagcccatggatctagtgacaggtccacccctgggactccaagcttg
caccccaaactcccatcgaacttgtga
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