Labeo rohita (rohu): 127157295
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Entry
127157295 CDS
T09007
Symbol
pnpla6
Name
(RefSeq) patatin-like phospholipase domain-containing protein 6 isoform X1
KO
K14676
lysophospholipid hydrolase [EC:
3.1.1.5
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
127157295 (pnpla6)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.5 lysophospholipase
127157295 (pnpla6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NTE_Ploop
cNMP_binding
Patatin
LapA_dom
DUF515
STE2
Podoplanin
Motif
Other DBs
NCBI-GeneID:
127157295
NCBI-ProteinID:
XP_050956513
LinkDB
All DBs
Position
1:19994759..20031243
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AA seq
1348 aa
AA seq
DB search
MGQSTSGPESPEPPQQDRFGNIKSLVEDQLQTSMVVGIVIGAGVVIVLIAVLIFFVLRRM
QLRKLEAQEAPKYRFRKRDKVLFYGRKIMRKVSQSTSSLVGSTSSSRPRLKKKQKMLNIA
KKILRFKKEVPTLQMKEPPPSVLEADLTEFDVANSHLPSEVLYMLKNVRVLGHFEKPLFL
ELCKHMVFLQFQQGEYVFRPGQPDSSIYVVQDGKLELCLTALDGKDGVVKEVYPGDSVHS
LLSILDVITGHQRPYKTVSARAAEVSTVLRLPVDAFLSIFEKYPESLVRVVQIIMVRLQR
VTVLALHNYLGLTNELFSHDMQPRPSPASPHPTRSSPIRHSKRFGSLTVPDKHREAAVQN
ATGGDHGKEGGATPTLSRTISMPVDIAGIQKSLRSDFDMAYERGRISVSAEDGAPIPPAF
TREQRERKVTVDEIPSSVYLYPEEESGMDNIFCPFQGRPNATLFEEAQKDILKLMKIEDP
ALLNGRVTFHHAKAGSVLARQGDQDVSLHFVLSGCLHVYQKMIDKQEAVCLFVTQPGEMV
GQLAVLTGEPLIFTIKAERDCTYLKISKSDFYEIMREQPSVVLSAAHTVAIRMSPFVRQM
DFAIDWMAVEAGRALYRQDDQSDCTYIVLNGRLRSVIRKANGKKELVGEYGRGDLIGVVE
ALTRQPRATTVHAVRDTELVKLPEGTLNNIKRRYPQVVTRLIHLLGQKILGNLQQPRGPF
SSSALGLPSMASSPDVTNPASNLSTVAVLPVCDDVPINAFNLELSHALSAIGPTLLLTSD
IIRERLGASALDSIHEYRLSGWLAQQEDINRIVLYQTDSGMTPWTQRCIRQADCILIVGL
GDQEPALGELEQMLENTAVRALKQLVLLHREDGPGPSRTVEWLNMRSWCSGHLHLKCPRR
VFSRRSPSKLREVYEKVFEKTADRHSDFSRLARVLTGNSIALVLGGGGARGCSHVGVIKA
MEDAGIPIDIVGGTSIGSFIGALYAEERSAVRVKQRAREWSKAMNSVFKTVLDLTYPITS
MFSGSAFNTSISKVFEDKQIEDLWLPYFNVTTDITASSMRVHKDGCVWRYVRASASYTPY
LPPLCDPKDGHLLVDGCYVNNVPADIARNMGTKTVIAIDVGSQDETDLCNYGDSLSGWWL
LWKRINPWAEKVKVPDMAEIQSRLAYVSCVRQLELVKKSAYCEYIRPPIDRFKTMDFGKF
DEIYDVGYQHGKLVFTEWARGDIIENMLKDHRSADYNDSKKTDSCTCPSADFTDLAEIVS
RIEPVQSYLGADAEESDYATEYEEDGMDTVREEEGEEEEEEEAEDPEDQSPGEWGPNGIF
PPDEEKTVRQRKNLTRDPNVDFSGVSDC
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgggacagagcacatcgggcccagagtccccagaacctccacagcaggacagatttgga
aacatcaagagtttagtggaggatcagctgcagaccagcatggtggtgggaattgtaatc
ggcgctggagtcgtcatcgttctcatcgctgtcctcatattttttgtcctgcgcaggatg
cagctccgcaaacttgaagctcaggaagccccgaagtatcgttttcgtaaaagagacaaa
gtcttgttttatgggaggaagattatgagaaaggtgtctcaatccacctcttcgttagtg
ggctccacttcttcctccaggccccgcctcaaaaagaaacagaagatgctaaacatagcc
aaaaagatcctgcgctttaagaaggaagtgcccactctgcagatgaaggaacctcctccg
tcagtgctggaggcagatctcacagagtttgacgtggccaattctcacctgccatctgag
gtgctctacatgctcaagaacgtgcgtgtgttgggtcactttgagaagccgttgtttctg
gagctgtgtaagcacatggtgtttctgcagttccagcagggtgaatatgtctttagacct
ggtcagcctgatagcagcatatatgtggtacaggatggcaagctggagttgtgtcttact
gcactggatggaaaggatggggtggtcaaagaggtttaccctggagacagtgttcacagt
ctgctaagcatccttgacgtcatcacaggacaccagagaccatataaaactgtctcagca
agagcggcagaagtgtccactgtcctcagactgcctgtcgatgcctttctgtccatcttt
gagaaatacccagagagccttgtgcgggtggttcagatcatcatggtccgtcttcaaaga
gtgactgttctggccctgcacaactacctggggctgaccaacgaactcttcagccatgac
atgcaaccccgtccctctcctgcctctcctcatccaacacgctccagtcccatacgacac
agcaaacgctttggcagtctcaccgttcctgataaacatcgtgaggccgctgtccaaaat
gctactggtggtgatcatggaaaggagggtggcgcaacaccgaccctcagcaggaccata
tccatgcctgtcgacattgcgggaattcagaagagcctgcgttcagatttcgacatggct
tatgagagaggccgtatctctgtatctgctgaggatggagctcccattccacctgctttc
acacgagagcagcgggagaggaaggtgacggtggatgagattccttcaagtgtatatttg
tatcctgaggaggagtcaggcatggacaacattttttgtccatttcaaggacgacctaac
gctacactgttcgaggaggcccagaaagacattctcaaactcatgaagattgaggaccct
gccctgctgaacgggagggtgacgtttcatcacgctaaagctggatctgtgttagccaga
cagggagaccaggatgtgagtctgcattttgtcctgtctggctgtcttcacgtatatcag
aagatgattgacaagcaggaagccgtgtgtttgttcgtgacccaaccgggtgagatggta
ggtcagctggctgttctcacaggagagccgctcatctttaccatcaaagctgagcgtgat
tgtacctacctcaagatctccaaatctgacttctatgagatcatgcgtgagcaaccaagc
gtagttctcagtgcagctcacactgtggctatccgcatgtccccgtttgtacggcagatg
gattttgccattgactggatggctgttgaagctggacgggccctgtacaggcaagatgat
cagtccgactgtacctatattgtgctgaatggacgtctgcgttctgttatccgaaaagcg
aatgggaagaaggagctggttggagagtatggacgaggagatctcattggagttgtggag
gctttgactcggcagcctcgtgccaccacagtccatgcagtcagagacactgagctggtg
aagcttccagaaggaacactcaacaacattaagagaagatacccgcaggtggtgacacgc
ttgatccatctgctcgggcagaagattttagggaacctccaacagccccgtggacctttc
tcaagctctgccctgggtctgccaagcatggcgtcaagtccagacgtcactaacccagcc
agtaatctctccactgtggccgtgcttcctgtttgtgatgatgtgccaatcaatgccttc
aatttggagctcagccatgctctcagcgccataggaccaactctgctgctaaccagtgac
atcatcagagaaagacttggcgcttctgctttggacagtattcatgaatacaggttatca
ggttggttggctcagcaggaggacattaatcgtatagtgctgtatcagacggacagcggt
atgaccccatggactcaacgctgcatccgacaagctgactgtatcctcattgttggtctt
ggagaccaggaacctgcacttggagagttggagcagatgttggaaaacacagcggttcgg
gccttgaagcagttagttctgttgcatcgtgaggatgggccgggcccgtcgagaaccgtt
gaatggctcaacatgcgaagctggtgctctggacaccttcacctaaagtgcccccgtaga
gttttctcacgaagaagcccttccaaactgcgagaggtatatgaaaaggttttcgagaag
actgcagacagacacagtgatttctcacgattggccagagtactcacaggaaacagcatc
gcccttgtgttgggcggaggcggagccaggggttgctctcatgttggtgtaatcaaagcc
atggaggacgcaggaattcccatcgacatagtgggaggaacgtccattggttcattcatt
ggtgctctgtatgcagaggaaagaagtgctgttcgggtcaagcagagggcgagagagtgg
tccaaggcaatgaactctgtgttcaaaacggtactggatcttacttatccaatcacgtcc
atgttctctggctctgccttcaacaccagcatctccaaagtcttcgaagacaaacaaatt
gaggatttgtggctgccttactttaatgtgaccacagacatcacagcttcttctatgcgt
gttcacaaagatggctgtgtttggcgctatgttagagccagtgcctcctataccccttat
ctgcctcctctctgcgaccccaaggacggccaccttctcgtggatggttgctatgttaac
aatgtcccagcggacatagctcgtaatatgggcacaaaaacagtcatcgccattgacgtg
ggcagccaggatgagactgatctctgtaactacggtgacagtctttcgggttggtggctg
ctatggaaacgaatcaacccgtgggcggagaaagtgaaggtgcctgacatggctgaaatc
cagtcccgtttggcttatgtatcttgtgtgcggcagctggaactcgtcaagaagagcgcg
tactgcgagtacattcggccacccattgaccgctttaagaccatggactttggaaaattt
gatgaaatctatgatgtgggttatcaacatggtaaactggtgtttactgagtgggctcgt
ggggacattattgaaaacatgctgaaagaccatcgctcagcggactacaatgacagcaag
aagactgactcatgcacgtgtcctagtgcagactttactgatctagctgaaattgtgtcc
aggattgagccggtgcagagctacttaggagccgatgcagaggagtctgattatgcgacg
gagtacgaggaggacgggatggacacagtaagagaggaggagggtgaggaagaagaggag
gaagaggccgaagaccctgaggaccagtctcctggagaatggggaccaaatgggatcttt
ccaccagatgaagagaagacagtccgtcagaggaagaacctcaccagggaccccaacgtg
gacttctctggagtgtcagattgctga
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integrated database retrieval system
